Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3655
         (498 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0671 - 5479240-5479286,5480399-5480588,5480669-5480824,548...    29   2.7  
11_06_0062 + 19709801-19710832,19712383-19712568,19712661-197128...    27   8.4  

>11_01_0671 -
           5479240-5479286,5480399-5480588,5480669-5480824,
           5481005-5481931
          Length = 439

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 321 EKLXTQPPERVAY-FXNXSRRQRKXMFVPSVHIMQIADCWG 202
           EK+ +Q  + + + F   S   R  ++ P++  +++ DCWG
Sbjct: 193 EKILSQSVKYLTFDFPEFSEHHRTHIYAPNLITLRLDDCWG 233


>11_06_0062 +
           19709801-19710832,19712383-19712568,19712661-19712867,
           19712940-19713078,19713172-19713380,19713520-19714134
          Length = 795

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 313 QLFSKIPQNVHLLPVHRFKKTVTERL 390
           ++F K PQ  H LP+ +F + V E +
Sbjct: 613 EVFRKDPQEPHFLPLQQFPEAVRENM 638


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,327,830
Number of Sequences: 37544
Number of extensions: 256544
Number of successful extensions: 481
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)