Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3654
         (601 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001311-1|AAN71066.1|  418|Drosophila melanogaster AT14055p pro...    30   2.8  
BT001255-1|AAN71011.1|  420|Drosophila melanogaster AT01178p pro...    30   2.8  
AE013599-3213|AAG22190.3|  409|Drosophila melanogaster CG15669-P...    30   2.8  
BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p pro...    29   3.7  
AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA ...    29   3.7  

>BT001311-1|AAN71066.1|  418|Drosophila melanogaster AT14055p
           protein.
          Length = 418

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = +1

Query: 181 PTLQTATHYCFTAEIGKAVAPTRADSQEVLRPVNIIILIHYRQNFPIDSNSDYVLLLINL 360
           PT   +        IG+A+  +  DS+E+LR   + +++      P+D   D  L  + L
Sbjct: 37  PTAPPSVFASVKRAIGQAIKSSPTDSEELLRSDRLPVIVGGSSTMPVDPMDDIELRSVQL 96


>BT001255-1|AAN71011.1|  420|Drosophila melanogaster AT01178p
           protein.
          Length = 420

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = +1

Query: 181 PTLQTATHYCFTAEIGKAVAPTRADSQEVLRPVNIIILIHYRQNFPIDSNSDYVLLLINL 360
           PT   +        IG+A+  +  DS+E+LR   + +++      P+D   D  L  + L
Sbjct: 39  PTAPPSVFASVKRAIGQAIKSSPTDSEELLRSDRLPVIVGGSSTMPVDPMDDIELRSVQL 98


>AE013599-3213|AAG22190.3|  409|Drosophila melanogaster CG15669-PK,
           isoform K protein.
          Length = 409

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = +1

Query: 181 PTLQTATHYCFTAEIGKAVAPTRADSQEVLRPVNIIILIHYRQNFPIDSNSDYVLLLINL 360
           PT   +        IG+A+  +  DS+E+LR   + +++      P+D   D  L  + L
Sbjct: 28  PTAPPSVFASVKRAIGQAIKSSPTDSEELLRSDRLPVIVGGSSTMPVDPMDDIELRSVQL 87


>BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p protein.
          Length = 1870

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 405  GYSKCCFSTIVPCYIFI*HFIKTIEININYGLPLIKPTW 521
            GY   CF+T++  YIF+ H I+  +I   Y   + +  W
Sbjct: 1159 GYCFICFNTLLGLYIFVFHCIQNEKIRREYRKYVRQHAW 1197


>AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA
            protein.
          Length = 1711

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 405  GYSKCCFSTIVPCYIFI*HFIKTIEININYGLPLIKPTW 521
            GY   CF+T++  YIF+ H I+  +I   Y   + +  W
Sbjct: 1000 GYCFICFNTLLGLYIFVFHCIQNEKIRREYRKYVRQHAW 1038


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,583,478
Number of Sequences: 53049
Number of extensions: 558869
Number of successful extensions: 970
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)