Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3653
         (686 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0429 + 17845303-17845431,17845508-17845684,17845782-178458...    29   4.6  

>10_08_0429 +
           17845303-17845431,17845508-17845684,17845782-17845895,
           17846386-17846520,17847659-17847790,17847919-17848071,
           17848574-17848709,17849338-17849443,17849538-17849730,
           17849803-17849963,17850227-17850442,17850732-17850997,
           17851505-17851779,17851871-17852327,17853973-17854055,
           17854260-17854469,17854897-17855373,17855462-17855743,
           17855910-17856236,17856418-17856507,17856788-17856899,
           17857004-17857104,17857524-17857568
          Length = 1458

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = -3

Query: 306 SNSLFCLHYTSAI*RRTALHRFIK---SFKCFTICFCKSGS 193
           SN + CL +   I    A+ RF++   +F CF+I +   GS
Sbjct: 363 SNEVLCLIFVDRIITAKAVERFMRGIVNFSCFSISYLTGGS 403


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,340,052
Number of Sequences: 37544
Number of extensions: 346897
Number of successful extensions: 651
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)