Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3652
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF058058-1|ABN51176.1|  658|Drosophila melanogaster NKAIN protein.    120   2e-27
AY051438-1|AAK92862.1|  452|Drosophila melanogaster GH10774p pro...   120   2e-27
AE013599-3974|AAN16122.1|  661|Drosophila melanogaster CG9047-PC...   114   1e-25
AE013599-3973|AAF47286.3|  661|Drosophila melanogaster CG9047-PB...   114   1e-25
AE013599-3972|AAM70797.2|  661|Drosophila melanogaster CG9047-PA...   114   1e-25

>EF058058-1|ABN51176.1|  658|Drosophila melanogaster NKAIN protein.
          Length = 658

 Score =  120 bits (289), Expect = 2e-27
 Identities = 58/136 (42%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
 Frame = +1

Query: 145 LSILQIITI-QRQVFDFLGYMWXXXXXXXXXXXXXXXGSFGAVQCITKYLIAYAVWSFMW 321
           +  LQ+ITI +RQVFDFLGYMW               G +GA     KY+I Y +W+F+W
Sbjct: 15  ICFLQVITIIERQVFDFLGYMWAPILVNFFHILFIIFGFYGAYHFRVKYIITYLIWNFLW 74

Query: 322 MVWNIFLICYYLNLGTLNREXXXXXXXXXXVSWWESNGWGCQPEWGEL--DRPGLWRPTH 495
           + WN FLIC+YLN+G LNR+          VSW+E+NG+GC+P +     D     RP  
Sbjct: 75  IGWNTFLICFYLNVGQLNRDSDLLNLGTGSVSWFEANGYGCKPTYNMAADDTFRPQRPER 134

Query: 496 VEGCHFQWYHVELGQS 543
           VEGC   +  VE+  S
Sbjct: 135 VEGCLLDYPLVEITHS 150


>AY051438-1|AAK92862.1|  452|Drosophila melanogaster GH10774p
           protein.
          Length = 452

 Score =  120 bits (289), Expect = 2e-27
 Identities = 58/136 (42%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
 Frame = +1

Query: 145 LSILQIITI-QRQVFDFLGYMWXXXXXXXXXXXXXXXGSFGAVQCITKYLIAYAVWSFMW 321
           +  LQ+ITI +RQVFDFLGYMW               G +GA     KY+I Y +W+F+W
Sbjct: 15  ICFLQVITIIERQVFDFLGYMWAPILVNFFHILFIIFGFYGAYHFRVKYIITYLIWNFLW 74

Query: 322 MVWNIFLICYYLNLGTLNREXXXXXXXXXXVSWWESNGWGCQPEWGEL--DRPGLWRPTH 495
           + WN FLIC+YLN+G LNR+          VSW+E+NG+GC+P +     D     RP  
Sbjct: 75  IGWNTFLICFYLNVGQLNRDSDLLNLGTGSVSWFEANGYGCKPTYNMAADDTFRPQRPER 134

Query: 496 VEGCHFQWYHVELGQS 543
           VEGC   +  VE+  S
Sbjct: 135 VEGCLLDYPLVEITHS 150


>AE013599-3974|AAN16122.1|  661|Drosophila melanogaster CG9047-PC,
           isoform C protein.
          Length = 661

 Score =  114 bits (274), Expect = 1e-25
 Identities = 58/139 (41%), Positives = 77/139 (55%), Gaps = 6/139 (4%)
 Frame = +1

Query: 145 LSILQIITI-QRQVFDFLGYMWXXXXXXXXXXXXXXXGSFGAVQCITKYLIAYAVWSFMW 321
           +  LQ+ITI +RQVFDFLGYMW               G +GA     KY+I Y +W+F+W
Sbjct: 15  ICFLQVITIIERQVFDFLGYMWAPILVNFFHILFIIFGFYGAYHFRVKYIITYLIWNFLW 74

Query: 322 MVWNIFLICYYLNLGTLNR---EXXXXXXXXXXVSWWESNGWGCQPEWGEL--DRPGLWR 486
           + WN FLIC+YLN+G LNR   +          VSW+E+NG+GC+P +     D     R
Sbjct: 75  IGWNTFLICFYLNVGQLNRVSFDSDLLNLGTGSVSWFEANGYGCKPTYNMAADDTFRPQR 134

Query: 487 PTHVEGCHFQWYHVELGQS 543
           P  VEGC   +  VE+  S
Sbjct: 135 PERVEGCLLDYPLVEITHS 153


>AE013599-3973|AAF47286.3|  661|Drosophila melanogaster CG9047-PB,
           isoform B protein.
          Length = 661

 Score =  114 bits (274), Expect = 1e-25
 Identities = 58/139 (41%), Positives = 77/139 (55%), Gaps = 6/139 (4%)
 Frame = +1

Query: 145 LSILQIITI-QRQVFDFLGYMWXXXXXXXXXXXXXXXGSFGAVQCITKYLIAYAVWSFMW 321
           +  LQ+ITI +RQVFDFLGYMW               G +GA     KY+I Y +W+F+W
Sbjct: 15  ICFLQVITIIERQVFDFLGYMWAPILVNFFHILFIIFGFYGAYHFRVKYIITYLIWNFLW 74

Query: 322 MVWNIFLICYYLNLGTLNR---EXXXXXXXXXXVSWWESNGWGCQPEWGEL--DRPGLWR 486
           + WN FLIC+YLN+G LNR   +          VSW+E+NG+GC+P +     D     R
Sbjct: 75  IGWNTFLICFYLNVGQLNRVSFDSDLLNLGTGSVSWFEANGYGCKPTYNMAADDTFRPQR 134

Query: 487 PTHVEGCHFQWYHVELGQS 543
           P  VEGC   +  VE+  S
Sbjct: 135 PERVEGCLLDYPLVEITHS 153


>AE013599-3972|AAM70797.2|  661|Drosophila melanogaster CG9047-PA,
           isoform A protein.
          Length = 661

 Score =  114 bits (274), Expect = 1e-25
 Identities = 58/139 (41%), Positives = 77/139 (55%), Gaps = 6/139 (4%)
 Frame = +1

Query: 145 LSILQIITI-QRQVFDFLGYMWXXXXXXXXXXXXXXXGSFGAVQCITKYLIAYAVWSFMW 321
           +  LQ+ITI +RQVFDFLGYMW               G +GA     KY+I Y +W+F+W
Sbjct: 15  ICFLQVITIIERQVFDFLGYMWAPILVNFFHILFIIFGFYGAYHFRVKYIITYLIWNFLW 74

Query: 322 MVWNIFLICYYLNLGTLNR---EXXXXXXXXXXVSWWESNGWGCQPEWGEL--DRPGLWR 486
           + WN FLIC+YLN+G LNR   +          VSW+E+NG+GC+P +     D     R
Sbjct: 75  IGWNTFLICFYLNVGQLNRVSFDSDLLNLGTGSVSWFEANGYGCKPTYNMAADDTFRPQR 134

Query: 487 PTHVEGCHFQWYHVELGQS 543
           P  VEGC   +  VE+  S
Sbjct: 135 PERVEGCLLDYPLVEITHS 153


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,098,234
Number of Sequences: 53049
Number of extensions: 634983
Number of successful extensions: 1422
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1419
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)