Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3650
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48314-1|CAA88307.1| 1042|Homo sapiens apomucin protein.               30   5.4  
U06711-1|AAA18431.1| 1056|Homo sapiens tracheobronchial mucin pr...    30   5.4  
BC033831-1|AAH33831.1|  574|Homo sapiens MUC5AC protein protein.       30   5.4  
AJ001403-1|CAA04738.1| 1081|Homo sapiens MUC5AC protein protein.       30   5.4  
AJ001402-1|CAA04737.1| 1081|Homo sapiens MUC5AC protein protein.       30   5.4  

>Z48314-1|CAA88307.1| 1042|Homo sapiens apomucin protein.
          Length = 1042

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +3

Query: 429 SALQGSWESNLPDKGFCKYPHLTTRMSSLATFTYQRLSPLSTIA*VVGRGSQPTWCI 599
           S + G W  ++PD+  C  PH T       T     + P +  +  VG  + P  C+
Sbjct: 382 SEMSGLWNVSIPDQPACHRPHPTPTTVGPTTVGSTTVGPTTVGSTTVGPTTPPAPCL 438


>U06711-1|AAA18431.1| 1056|Homo sapiens tracheobronchial mucin
           protein.
          Length = 1056

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +3

Query: 429 SALQGSWESNLPDKGFCKYPHLTTRMSSLATFTYQRLSPLSTIA*VVGRGSQPTWCI 599
           S + G W  ++PD+  C  PH T       T     + P +  +  VG  + P  C+
Sbjct: 472 SEMSGLWNVSIPDQPACHRPHPTPTTVGPTTVGSTTVGPTTVGSTTVGPTTPPAPCL 528


>BC033831-1|AAH33831.1|  574|Homo sapiens MUC5AC protein protein.
          Length = 574

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +3

Query: 429 SALQGSWESNLPDKGFCKYPHLTTRMSSLATFTYQRLSPLSTIA*VVGRGSQPTWCI 599
           S + G W  ++PD+  C  PH T       T     + P +  +  VG  + P  C+
Sbjct: 6   SEMSGLWNVSIPDQPACHRPHPTPTTVGPTTVGSTTVGPTTVGSTTVGPTTPPAPCL 62


>AJ001403-1|CAA04738.1| 1081|Homo sapiens MUC5AC protein protein.
          Length = 1081

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +3

Query: 429 SALQGSWESNLPDKGFCKYPHLTTRMSSLATFTYQRLSPLSTIA*VVGRGSQPTWCI 599
           S + G W  ++PD+  C  PH T       T     + P +  +  VG  + P  C+
Sbjct: 513 SEMSGLWNVSIPDQPACHRPHPTPTTVGPTTVGSTTVGPTTVGSTTVGPTTPPAPCL 569


>AJ001402-1|CAA04737.1| 1081|Homo sapiens MUC5AC protein protein.
          Length = 1081

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +3

Query: 429 SALQGSWESNLPDKGFCKYPHLTTRMSSLATFTYQRLSPLSTIA*VVGRGSQPTWCI 599
           S + G W  ++PD+  C  PH T       T     + P +  +  VG  + P  C+
Sbjct: 513 SEMSGLWNVSIPDQPACHRPHPTPTTVGPTTVGSTTVGPTTVGSTTVGPTTPPAPCL 569


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,002,055
Number of Sequences: 237096
Number of extensions: 1942907
Number of successful extensions: 6064
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6064
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)