Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3650
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p pro...    29   6.4  
AY122109-1|AAM52621.1|  868|Drosophila melanogaster GH12365p pro...    29   6.4  
AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-P...    29   6.4  
AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-P...    29   6.4  

>BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p protein.
          Length = 1240

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 517  AKDDIRVVRCGYLQKPLSGRLDSQD--PWRALGFPC 416
            A++ +RVV CG LQ P  GR  S D  P   + F C
Sbjct: 1112 AENAVRVVSCGVLQTPRFGRKLSFDFMPGAKVSFEC 1147


>AY122109-1|AAM52621.1|  868|Drosophila melanogaster GH12365p
           protein.
          Length = 868

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 517 AKDDIRVVRCGYLQKPLSGRLDSQD--PWRALGFPC 416
           A++ +RVV CG LQ P  GR  S D  P   + F C
Sbjct: 549 AENAVRVVSCGVLQTPRFGRKLSFDFMPGAKVSFEC 584


>AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-PB,
            isoform B protein.
          Length = 1431

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 517  AKDDIRVVRCGYLQKPLSGRLDSQD--PWRALGFPC 416
            A++ +RVV CG LQ P  GR  S D  P   + F C
Sbjct: 1112 AENAVRVVSCGVLQTPRFGRKLSFDFMPGAKVSFEC 1147


>AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-PA,
            isoform A protein.
          Length = 1431

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -2

Query: 517  AKDDIRVVRCGYLQKPLSGRLDSQD--PWRALGFPC 416
            A++ +RVV CG LQ P  GR  S D  P   + F C
Sbjct: 1112 AENAVRVVSCGVLQTPRFGRKLSFDFMPGAKVSFEC 1147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,946,947
Number of Sequences: 53049
Number of extensions: 554024
Number of successful extensions: 1085
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)