Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3625
(462 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036700-2|AAB88365.1| 550|Caenorhabditis elegans Hypothetical ... 32 0.23
Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical p... 30 0.93
Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical pr... 30 0.93
AC024798-2|AAK29923.1| 352|Caenorhabditis elegans Hypothetical ... 29 1.6
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z75530-8|CAA99792.2| 405|Caenorhabditis elegans Hypothetical pr... 29 2.1
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p... 27 4.9
U55363-11|AAA97968.1| 299|Caenorhabditis elegans Hypothetical p... 27 6.5
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ... 27 6.5
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 27 6.5
AC006723-3|AAF59427.1| 881|Caenorhabditis elegans Hypothetical ... 27 6.5
Z19555-3|CAA79616.1| 182|Caenorhabditis elegans Hypothetical pr... 27 8.6
U53150-2|AAV28350.1| 580|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF482952-1|AAL89754.1| 668|Caenorhabditis elegans CUP-5L protein. 27 8.6
AF338583-1|AAK19624.1| 611|Caenorhabditis elegans CUP-5 protein. 27 8.6
AC006679-13|AAL38965.1| 644|Caenorhabditis elegans Coelomocyte ... 27 8.6
AC006679-12|AAM15596.1| 611|Caenorhabditis elegans Coelomocyte ... 27 8.6
AC006679-11|AAP82643.1| 668|Caenorhabditis elegans Coelomocyte ... 27 8.6
AC006679-10|AAP82642.1| 619|Caenorhabditis elegans Coelomocyte ... 27 8.6
>AF036700-2|AAB88365.1| 550|Caenorhabditis elegans Hypothetical
protein M04G7.2 protein.
Length = 550
Score = 31.9 bits (69), Expect = 0.23
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 133 LTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMY-IAEKPLSIDDI 309
LT SPS ++S+S+E + ++ N ++ A R A+ KL + + ++ + +++DD
Sbjct: 209 LTADSPSSRRTSKSLEENSSETTNDSISLADDEETREAY--RKLFKDFAMSSQKMTLDDF 266
Query: 310 VKEGSNKVGTNSIFLGTVYDYGVKS 384
+E SN G L TV+++ V +
Sbjct: 267 KQEFSNLPGDPPSDLCTVFNHPVNN 291
>Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 29.9 bits (64), Expect = 0.93
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +1
Query: 199 LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVK-----EGSNKVGTNSIFLGTV 363
LN+ L + L DN + + + ++ D ++K +G N NS F+G +
Sbjct: 145 LNLNLQPTQTYTLESPTNDNVVINVALVDQIGKTDIVIKLIYVYDGPN---VNSRFVGNL 201
Query: 364 YDYGVKSPNAGSTSSNVT 417
YDY V SP +S N T
Sbjct: 202 YDY-VNSPTLMKSSGNST 218
>Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 29.9 bits (64), Expect = 0.93
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +1
Query: 199 LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVK-----EGSNKVGTNSIFLGTV 363
LN+ L + L DN + + + ++ D ++K +G N NS F+G +
Sbjct: 145 LNLNLQPTQTYTLESPTNDNVVINVALVDQIGKTDIVIKLIYVYDGPN---VNSRFVGNL 201
Query: 364 YDYGVKSPNAGSTSSNVT 417
YDY V SP +S N T
Sbjct: 202 YDY-VNSPTLMKSSGNST 218
>AC024798-2|AAK29923.1| 352|Caenorhabditis elegans Hypothetical
protein Y48G9A.9a protein.
Length = 352
Score = 29.1 bits (62), Expect = 1.6
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 121 NLNSLTEASPSLGQSSESVESDENKRLNVK-LNNARVANLRIAHGDNKLSQMY 276
N N++ E P+ QSS E+D++ R V+ LNN +A ++ G L++ Y
Sbjct: 17 NNNNVNEKRPASAQSSNGTETDDHHRKYVETLNNFIIATEKL--GIEGLAKQY 67
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 109 TNALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEK 288
TNA LN++T ++ S SSES S + + K + A+ ++ H + + + Y +
Sbjct: 163 TNATILNAMTASTSSNDSSSESGVSGVKEAKDEKKKSKIQADEKLRHEERQSTSDYTDDD 222
Query: 289 PL 294
P+
Sbjct: 223 PI 224
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 109 TNALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEK 288
TNA LN++T ++ S SSES S + + K + A+ ++ H + + + Y +
Sbjct: 163 TNATILNAMTASTSSNDSSSESGVSGVKEAKDEKKKSKIQADEKLRHEERQSTSDYTDDD 222
Query: 289 PL 294
P+
Sbjct: 223 PI 224
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 109 TNALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEK 288
TNA LN++T ++ S SSES S + + K + A+ ++ H + + + Y +
Sbjct: 163 TNATILNAMTASTSSNDSSSESGVSGVKEAKDEKKKSKIQADEKLRHEERQSTSDYTDDD 222
Query: 289 PL 294
P+
Sbjct: 223 PI 224
>Z75530-8|CAA99792.2| 405|Caenorhabditis elegans Hypothetical
protein C47E8.3 protein.
Length = 405
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -2
Query: 365 YTVPRKMLLVPTLLEPSLTMSSIDSGFSAIYIWLN-LLSPCAMRKLATRALFSFTFNRLF 189
Y + + + + T+ E ++ SS++ GF +Y +LN ++S + R F NRL
Sbjct: 275 YLLSQSLQVFLTVWE-TINRSSLEDGFPTMYSYLNDIVSIFTLLASCLRFPIYFCCNRLI 333
Query: 188 SSDSTDSL 165
+ S D+L
Sbjct: 334 HTASVDTL 341
>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
protein B0222.9 protein.
Length = 1217
Score = 27.5 bits (58), Expect = 4.9
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = -2
Query: 257 LSPCAMRKLATRALFSF--TFNRLFSSDSTDSLLCPKLGDASVKE---FKFNAFV 108
L+ A+ + A + LF+ N +FS T L C KLG+ S ++ F F A V
Sbjct: 377 LTQVAIEEFAEKKLFATHTIVNAIFSRSLTGFLFCLKLGETSEQDSTNFNFAALV 431
>U55363-11|AAA97968.1| 299|Caenorhabditis elegans Hypothetical
protein ZC404.10 protein.
Length = 299
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 342 VSAHFVGALFDYVVYR*RF-FGNIHLAQFIIAVCDAQIGHPGVIQLYV*SF 193
+ A F L V+ R + +++ +I++CD G+IQLY+ +F
Sbjct: 51 IFAFFANILILIVLSRKEMRYSGVNVTMMLISICDLVCAIAGLIQLYLRNF 101
>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
protein F15E6.6 protein.
Length = 1228
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = -2
Query: 200 NRLFSSDSTDSLLCPKLGDASVKE---FKFNAFV 108
N +FSS T L C KLG+ S ++ F F A V
Sbjct: 395 NTVFSSSITGQLFCLKLGETSEQDSTSFNFAALV 428
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 27.1 bits (57), Expect = 6.5
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 223 GRYSALRLIVCSRLIP-PIRCSA-LNWATPRLRNLNLMHSSNRDKSVRAKQSITR 65
G +S + I+ P P +CS+ TPR + SS+R VRAK S T+
Sbjct: 164 GLHSIFQNIISGARSPSPRQCSSDSEIITPRKGAFAALRSSSRSSQVRAKTSTTK 218
>AC006723-3|AAF59427.1| 881|Caenorhabditis elegans Hypothetical
protein Y19D10B.4 protein.
Length = 881
Score = 27.1 bits (57), Expect = 6.5
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Frame = +1
Query: 127 NSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSI-- 300
+SL PS+ +++ E D + + N + +G +M+I K +
Sbjct: 330 SSLQTTVPSISEATIVAEGDSYRLYSPASNIGDTVTIHCQNGTTYNYRMFIQSKNTLLFN 389
Query: 301 --DDI---VKEGSNKVGTNSIFLGT 360
DD+ V G +G SIFLGT
Sbjct: 390 YNDDMHIDVGNGMAVIGAKSIFLGT 414
>Z19555-3|CAA79616.1| 182|Caenorhabditis elegans Hypothetical
protein F02A9.2 protein.
Length = 182
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 124 LNSLTEASPSLGQSSESVESDENKRLNVKLNNARV-ANLRIAHGDNKLSQMYIAEKPLSI 300
LN+L E SP+L + + + ++N + A+ IA G K+ Y+A + S+
Sbjct: 74 LNALKEKSPTLHEKASKLHQIVKDKVNALNDEAKAFVKKAIAEG-RKIHAQYLAGEKPSL 132
Query: 301 DDI 309
D +
Sbjct: 133 DTL 135
>U53150-2|AAV28350.1| 580|Caenorhabditis elegans Hypothetical
protein F20A1.4 protein.
Length = 580
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 350 KMLLVPTLLEPSLTMSSIDSGFSAIYIW 267
K+L L +T+SSI SGF+ +Y+W
Sbjct: 388 KVLDTVDALFSQVTISSICSGFALLYLW 415
>AF482952-1|AAL89754.1| 668|Caenorhabditis elegans CUP-5L protein.
Length = 668
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 406 SNVTMTRGTANFDIKEFK 459
SNVT+ T NFDI+E K
Sbjct: 195 SNVTVNNNTYNFDIREVK 212
>AF338583-1|AAK19624.1| 611|Caenorhabditis elegans CUP-5 protein.
Length = 611
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 406 SNVTMTRGTANFDIKEFK 459
SNVT+ T NFDI+E K
Sbjct: 195 SNVTVNNNTYNFDIREVK 212
>AC006679-13|AAL38965.1| 644|Caenorhabditis elegans Coelomocyte
uptake defective protein5, isoform b protein.
Length = 644
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 406 SNVTMTRGTANFDIKEFK 459
SNVT+ T NFDI+E K
Sbjct: 195 SNVTVNNNTYNFDIREVK 212
>AC006679-12|AAM15596.1| 611|Caenorhabditis elegans Coelomocyte
uptake defective protein5, isoform a protein.
Length = 611
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 406 SNVTMTRGTANFDIKEFK 459
SNVT+ T NFDI+E K
Sbjct: 195 SNVTVNNNTYNFDIREVK 212
>AC006679-11|AAP82643.1| 668|Caenorhabditis elegans Coelomocyte
uptake defective protein5, isoform d protein.
Length = 668
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 406 SNVTMTRGTANFDIKEFK 459
SNVT+ T NFDI+E K
Sbjct: 195 SNVTVNNNTYNFDIREVK 212
>AC006679-10|AAP82642.1| 619|Caenorhabditis elegans Coelomocyte
uptake defective protein5, isoform c protein.
Length = 619
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 406 SNVTMTRGTANFDIKEFK 459
SNVT+ T NFDI+E K
Sbjct: 205 SNVTVNNNTYNFDIREVK 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.131 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,132,020
Number of Sequences: 27780
Number of extensions: 190510
Number of successful extensions: 509
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -