Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3624
         (757 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001393-1|AAN71148.1|  420|Drosophila melanogaster GH05251p pro...   270   1e-72
AE014297-3569|AAF56313.1|  816|Drosophila melanogaster CG6643-PA...   270   1e-72
AE014297-3568|AAN14000.2|  849|Drosophila melanogaster CG6643-PB...   270   1e-72
AY069649-1|AAL39794.1|  558|Drosophila melanogaster LD41827p pro...    30   3.9  
AY047509-1|AAK77241.1|  430|Drosophila melanogaster GH01721p pro...    30   3.9  
AE014298-810|AAF46096.1|  558|Drosophila melanogaster CG3016-PA ...    30   3.9  
AE014134-979|AAF52295.1|  430|Drosophila melanogaster CG8965-PA ...    30   3.9  
EF078695-1|ABK63801.1|  786|Drosophila melanogaster Yurt delta p...    29   9.1  
EF078694-1|ABK63800.1|  932|Drosophila melanogaster Yurt gamma p...    29   9.1  
BT015265-1|AAT94494.1|  972|Drosophila melanogaster LD33734p pro...    29   9.1  
AY061133-1|AAL28681.1|  729|Drosophila melanogaster LD11531p pro...    29   9.1  
AY051624-1|AAK93048.1|  648|Drosophila melanogaster GH27269p pro...    29   9.1  
AE014297-1692|AAF54951.1|  972|Drosophila melanogaster CG9764-PA...    29   9.1  
AE014297-95|AAF52123.1|  970|Drosophila melanogaster CG14650-PA ...    29   9.1  

>BT001393-1|AAN71148.1|  420|Drosophila melanogaster GH05251p
           protein.
          Length = 420

 Score =  270 bits (663), Expect = 1e-72
 Identities = 126/182 (69%), Positives = 153/182 (84%)
 Frame = +3

Query: 123 GASKTALPPGSDDGNSVFSMMYTFLKKVSIVGAVYLVGYMQWSVAWLIGPVILSVMRDQW 302
           G S  A    SDD NS+FS+ YT  KKV+IVG++YLVGYM WSVAWLI PVILSV RDQ 
Sbjct: 25  GNSIVATKSVSDD-NSIFSVFYTLGKKVAIVGSIYLVGYMGWSVAWLIAPVILSVARDQL 83

Query: 303 RKENEYKRNIAKVAALSSEKDVILARLDDLPSWVFFPDVERAEWLNRILLQVWPNVNSYA 482
            K +E KR+IAK +AL+SEKDVILAR+D+LP+WV+FPDVER EWLN+IL QVWPN N +A
Sbjct: 84  AKTSEKKRDIAKASALASEKDVILARIDELPAWVYFPDVERCEWLNKILKQVWPNANHFA 143

Query: 483 KTLLKDLIEPAVAESLANYKLSGFKFERMILGTIAPRVGGVKVYDKNLSRNEIIMDIDLF 662
           +TL+K+ IEP VA +LANYK+ GF+F+R+ILGTI PR+GGVK+YDKN+ RNEIIMD+DLF
Sbjct: 144 RTLVKETIEPNVALALANYKMHGFRFDRIILGTIPPRIGGVKIYDKNVDRNEIIMDLDLF 203

Query: 663 YA 668
           YA
Sbjct: 204 YA 205



 Score = 39.1 bits (87), Expect = 0.006
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +1

Query: 673 DCDISFVLQRIRGGIKDLQIHGMV 744
           DCDI+F L  ++GGIKD QIHG V
Sbjct: 207 DCDINFYLGGMKGGIKDFQIHGWV 230


>AE014297-3569|AAF56313.1|  816|Drosophila melanogaster CG6643-PA,
           isoform A protein.
          Length = 816

 Score =  270 bits (663), Expect = 1e-72
 Identities = 126/182 (69%), Positives = 153/182 (84%)
 Frame = +3

Query: 123 GASKTALPPGSDDGNSVFSMMYTFLKKVSIVGAVYLVGYMQWSVAWLIGPVILSVMRDQW 302
           G S  A    SDD NS+FS+ YT  KKV+IVG++YLVGYM WSVAWLI PVILSV RDQ 
Sbjct: 25  GNSIVATKSVSDD-NSIFSVFYTLGKKVAIVGSIYLVGYMGWSVAWLIAPVILSVARDQL 83

Query: 303 RKENEYKRNIAKVAALSSEKDVILARLDDLPSWVFFPDVERAEWLNRILLQVWPNVNSYA 482
            K +E KR+IAK +AL+SEKDVILAR+D+LP+WV+FPDVER EWLN+IL QVWPN N +A
Sbjct: 84  AKTSEKKRDIAKASALASEKDVILARIDELPAWVYFPDVERCEWLNKILKQVWPNANHFA 143

Query: 483 KTLLKDLIEPAVAESLANYKLSGFKFERMILGTIAPRVGGVKVYDKNLSRNEIIMDIDLF 662
           +TL+K+ IEP VA +LANYK+ GF+F+R+ILGTI PR+GGVK+YDKN+ RNEIIMD+DLF
Sbjct: 144 RTLVKETIEPNVALALANYKMHGFRFDRIILGTIPPRIGGVKIYDKNVDRNEIIMDLDLF 203

Query: 663 YA 668
           YA
Sbjct: 204 YA 205



 Score = 39.1 bits (87), Expect = 0.006
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +1

Query: 673 DCDISFVLQRIRGGIKDLQIHGMV 744
           DCDI+F L  ++GGIKD QIHG V
Sbjct: 207 DCDINFYLGGMKGGIKDFQIHGWV 230


>AE014297-3568|AAN14000.2|  849|Drosophila melanogaster CG6643-PB,
           isoform B protein.
          Length = 849

 Score =  270 bits (663), Expect = 1e-72
 Identities = 126/182 (69%), Positives = 153/182 (84%)
 Frame = +3

Query: 123 GASKTALPPGSDDGNSVFSMMYTFLKKVSIVGAVYLVGYMQWSVAWLIGPVILSVMRDQW 302
           G S  A    SDD NS+FS+ YT  KKV+IVG++YLVGYM WSVAWLI PVILSV RDQ 
Sbjct: 58  GNSIVATKSVSDD-NSIFSVFYTLGKKVAIVGSIYLVGYMGWSVAWLIAPVILSVARDQL 116

Query: 303 RKENEYKRNIAKVAALSSEKDVILARLDDLPSWVFFPDVERAEWLNRILLQVWPNVNSYA 482
            K +E KR+IAK +AL+SEKDVILAR+D+LP+WV+FPDVER EWLN+IL QVWPN N +A
Sbjct: 117 AKTSEKKRDIAKASALASEKDVILARIDELPAWVYFPDVERCEWLNKILKQVWPNANHFA 176

Query: 483 KTLLKDLIEPAVAESLANYKLSGFKFERMILGTIAPRVGGVKVYDKNLSRNEIIMDIDLF 662
           +TL+K+ IEP VA +LANYK+ GF+F+R+ILGTI PR+GGVK+YDKN+ RNEIIMD+DLF
Sbjct: 177 RTLVKETIEPNVALALANYKMHGFRFDRIILGTIPPRIGGVKIYDKNVDRNEIIMDLDLF 236

Query: 663 YA 668
           YA
Sbjct: 237 YA 238



 Score = 39.1 bits (87), Expect = 0.006
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +1

Query: 673 DCDISFVLQRIRGGIKDLQIHGMV 744
           DCDI+F L  ++GGIKD QIHG V
Sbjct: 240 DCDINFYLGGMKGGIKDFQIHGWV 263


>AY069649-1|AAL39794.1|  558|Drosophila melanogaster LD41827p
           protein.
          Length = 558

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -2

Query: 459 RLVGVSCSTI-RLVRRPGRIPMKASRQVSLVSHLFQKTVQRPLRCCVC 319
           R V  SC ++ RL R PGR+ + ++   S V+H FQ  +   + C  C
Sbjct: 295 RRVSSSCRSLERLHRGPGRVSIWSNMMPSQVAHPFQGAMGAQIVCNGC 342


>AY047509-1|AAK77241.1|  430|Drosophila melanogaster GH01721p
           protein.
          Length = 430

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 19/62 (30%), Positives = 27/62 (43%)
 Frame = -2

Query: 513 PVRSGPSIKSLRSCSHSARLVGVSCSTIRLVRRPGRIPMKASRQVSLVSHLFQKTVQRPL 334
           P+R+     SLRS SH++      C +        R P +AS   SL   L Q T++   
Sbjct: 9   PLRNRSDSVSLRSSSHASSCASSMCGSPEPPAELQRTPSRASSYSSLNEQLPQTTIKVYT 68

Query: 333 RC 328
            C
Sbjct: 69  NC 70


>AE014298-810|AAF46096.1|  558|Drosophila melanogaster CG3016-PA
           protein.
          Length = 558

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -2

Query: 459 RLVGVSCSTI-RLVRRPGRIPMKASRQVSLVSHLFQKTVQRPLRCCVC 319
           R V  SC ++ RL R PGR+ + ++   S V+H FQ  +   + C  C
Sbjct: 295 RRVSSSCRSLERLHRGPGRVSIWSNMMPSQVAHPFQGAMGAQIVCNGC 342


>AE014134-979|AAF52295.1|  430|Drosophila melanogaster CG8965-PA
           protein.
          Length = 430

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 19/62 (30%), Positives = 27/62 (43%)
 Frame = -2

Query: 513 PVRSGPSIKSLRSCSHSARLVGVSCSTIRLVRRPGRIPMKASRQVSLVSHLFQKTVQRPL 334
           P+R+     SLRS SH++      C +        R P +AS   SL   L Q T++   
Sbjct: 9   PLRNRSDSVSLRSSSHASSCASSMCGSPEPPAELQRTPSRASSYSSLNEQLPQTTIKVYT 68

Query: 333 RC 328
            C
Sbjct: 69  NC 70


>EF078695-1|ABK63801.1|  786|Drosophila melanogaster Yurt delta
           protein.
          Length = 786

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -3

Query: 611 NLDATNPRRNGTENHTFKFKSAEFVIGQ 528
           N D TNP RN T +H   F  A    GQ
Sbjct: 556 NFDETNPFRNATSSHHGSFGKASISSGQ 583


>EF078694-1|ABK63800.1|  932|Drosophila melanogaster Yurt gamma
           protein.
          Length = 932

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -3

Query: 611 NLDATNPRRNGTENHTFKFKSAEFVIGQ 528
           N D TNP RN T +H   F  A    GQ
Sbjct: 556 NFDETNPFRNATSSHHGSFGKASISSGQ 583


>BT015265-1|AAT94494.1|  972|Drosophila melanogaster LD33734p
           protein.
          Length = 972

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -3

Query: 611 NLDATNPRRNGTENHTFKFKSAEFVIGQ 528
           N D TNP RN T +H   F  A    GQ
Sbjct: 556 NFDETNPFRNATSSHHGSFGKASISSGQ 583


>AY061133-1|AAL28681.1|  729|Drosophila melanogaster LD11531p
           protein.
          Length = 729

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -3

Query: 611 NLDATNPRRNGTENHTFKFKSAEFVIGQ 528
           N D TNP RN T +H   F  A    GQ
Sbjct: 313 NFDETNPFRNATSSHHGSFGKASISSGQ 340


>AY051624-1|AAK93048.1|  648|Drosophila melanogaster GH27269p
           protein.
          Length = 648

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -1

Query: 436 NHSARSTSGKNTHEGKSSSLASITSFSEDSAATFAMLRLYSFSL 305
           N S  + +G NTH G SSS +S+   S ++ ++ +  R  S +L
Sbjct: 177 NASHSNHTGANTHAGSSSSSSSVNYSSNNNVSSSSAKRYSSSNL 220


>AE014297-1692|AAF54951.1|  972|Drosophila melanogaster CG9764-PA
           protein.
          Length = 972

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -3

Query: 611 NLDATNPRRNGTENHTFKFKSAEFVIGQ 528
           N D TNP RN T +H   F  A    GQ
Sbjct: 556 NFDETNPFRNATSSHHGSFGKASISSGQ 583


>AE014297-95|AAF52123.1|  970|Drosophila melanogaster CG14650-PA
           protein.
          Length = 970

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -1

Query: 436 NHSARSTSGKNTHEGKSSSLASITSFSEDSAATFAMLRLYSFSL 305
           N S  + +G NTH G SSS +S+   S ++ ++ +  R  S +L
Sbjct: 499 NASHSNHTGANTHAGSSSSSSSVNYSSNNNVSSSSAKRYSSSNL 542


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,087,840
Number of Sequences: 53049
Number of extensions: 758428
Number of successful extensions: 1992
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1990
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)