Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3610
(752 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 58 2e-08
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 58 2e-08
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 51 1e-06
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 49 6e-06
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 48 1e-05
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 48 1e-05
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 46 6e-05
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 41 0.002
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 40 0.003
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 40 0.005
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 38 0.011
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 38 0.011
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 38 0.011
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 38 0.011
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 38 0.011
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 38 0.011
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 37 0.026
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 37 0.026
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 36 0.045
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 36 0.059
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 36 0.059
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 36 0.059
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 36 0.059
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 36 0.059
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 33 0.42
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 57.6 bits (133), Expect = 2e-08
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Frame = -1
Query: 485 FQIQLTTPMTLFADDSTKTIRCRNYILYEHDINSTLHSIISWLDKNNLIINLDKTKFMQF 306
F I + FADD+ R + I ++ L S+ WL + IN+ K K + F
Sbjct: 654 FPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF 713
Query: 305 YQRNKYINLTIYNNNNHIYETENIDFLGVKIDNKLDWKSHTDGLCKRVSSSA---YALFK 135
NK + NN I + + + +LGV +D +L W+ H + K + A + L
Sbjct: 714 -TLNKQTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLIN 772
Query: 134 LSSILNTDALLTAYRGVVQSCLRYGIIFWGNSMQKD 27
S L+ + Y V++ YG WGN+ + +
Sbjct: 773 ARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSN 808
Score = 39.1 bits (87), Expect = 0.006
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -3
Query: 552 ITYGVPQGSVLGPLLFIIYINDFP 481
I GVPQGSVLGP+L+ +Y DFP
Sbjct: 632 IEAGVPQGSVLGPILYTLYTADFP 655
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 57.6 bits (133), Expect = 2e-08
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Frame = -1
Query: 485 FQIQLTTPMTLFADDSTKTIRCRNYILYEHDINSTLHSIISWLDKNNLIINLDKTKFMQF 306
F I + FADD+ R + I ++ L S+ WL + IN+ K K + F
Sbjct: 654 FPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF 713
Query: 305 YQRNKYINLTIYNNNNHIYETENIDFLGVKIDNKLDWKSHTDGLCKRVSSSA---YALFK 135
NK + NN I + + + +LGV +D +L W+ H + K + A + L
Sbjct: 714 -TLNKQTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLIN 772
Query: 134 LSSILNTDALLTAYRGVVQSCLRYGIIFWGNSMQKD 27
S L+ + Y V++ YG WGN+ + +
Sbjct: 773 ARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSN 808
Score = 39.1 bits (87), Expect = 0.006
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -3
Query: 552 ITYGVPQGSVLGPLLFIIYINDFP 481
I GVPQGSVLGP+L+ +Y DFP
Sbjct: 632 IEAGVPQGSVLGPILYTLYTADFP 655
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 51.2 bits (117), Expect = 1e-06
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Frame = -1
Query: 461 MTLFADDSTKTIRCRNYILYEHDINSTLHSIISWLDKNNLIINLDKTKFMQFYQRNKYIN 282
++ FADD+ R R+ I + L I WL + +N K K + F N+
Sbjct: 664 VSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTF-TLNRQDC 722
Query: 281 LTIYNNNNHIYETENIDFLGVKIDNKLDWKSHTDG---LCKRVSSSAYALFKLSSILNTD 111
+ N+ + + + + +LGV +D +L W+ H + K +++ + L S L+ D
Sbjct: 723 PPLLLNSIPLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLD 782
Query: 110 ALLTAYRGVVQSCLRYGIIFWGNS 39
+ Y +++ YG WGN+
Sbjct: 783 HKVLLYNSILKPIWTYGSQLWGNA 806
Score = 37.9 bits (84), Expect = 0.015
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3
Query: 552 ITYGVPQGSVLGPLLFIIYINDFPNS 475
I GVPQGSVLGP L++IY D P +
Sbjct: 634 IEAGVPQGSVLGPTLYLIYTADIPTN 659
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 49.2 bits (112), Expect = 6e-06
Identities = 31/141 (21%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Frame = -1
Query: 452 FADDSTKTIRCRNYILYEHDINSTLHSIISWLDKNNLIINLDKTKFMQFYQRNKYINLTI 273
+ADD I ++++ I +W + ++L K + + R ++ I
Sbjct: 666 YADDFFLIINFNKNTNTNFNLDNLFDDIENWCSYSGASLSLSKCQHLHIC-RKRHCTCKI 724
Query: 272 YNNNNHIYETENIDFLGVKIDNKLDWKSHTDGLCKRVSSSAYALFKLSSI---LNTDALL 102
NN I ++ LG+ ++NK W +H + L ++ + + LSS+ NT LL
Sbjct: 725 SCNNFQIPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLL 784
Query: 101 TAYRGVVQSCLRYGIIFWGNS 39
+ + + L YG+ +G++
Sbjct: 785 NVAKATIIAKLEYGLFLYGHA 805
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 48.4 bits (110), Expect = 1e-05
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Frame = -1
Query: 461 MTLFADDSTKTIRCRNYILYEHDINSTLHSIISWLDKNNLIINLDKTKFMQFYQRNK--Y 288
++LFADD+ +Y + S L+ + + K + IN +KT + F +R K Y
Sbjct: 692 LSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPRY 751
Query: 287 I-NLTIYNNNNHIYETENIDFLGVKIDNKLDWKSHTDGLCKRVSS---SAYALFKLSSIL 120
+ + + ++ I +NI +LG+ D KL +K H + +V+ + Y L S L
Sbjct: 752 LPDRQLRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKL 811
Query: 119 NTDALLTAYRGVVQSCLRYGIIFWGNSMQ 33
+ + ++ + L YG WG Q
Sbjct: 812 SISNKIIIFKTIFNPILMYGSPVWGRCAQ 840
Score = 37.1 bits (82), Expect = 0.026
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3
Query: 558 RKITYGVPQGSVLGPLLFIIYINDFPNS 475
R + GVPQGSVLGP LF I+ +D P +
Sbjct: 660 RILNAGVPQGSVLGPTLFNIFTHDIPQA 687
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 48.4 bits (110), Expect = 1e-05
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Frame = -1
Query: 461 MTLFADDSTKTIRCRNYILYEHDINSTLHSIISWLDKNNLIINLDKTKFMQFYQRNK--Y 288
++LFADD+ +Y + S L+ + + K + IN +KT + F +R K Y
Sbjct: 640 LSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPRY 699
Query: 287 I-NLTIYNNNNHIYETENIDFLGVKIDNKLDWKSHTDGLCKRVSS---SAYALFKLSSIL 120
+ + + ++ I +NI +LG+ D KL +K H + +V+ + Y L S L
Sbjct: 700 LPDRQLRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKL 759
Query: 119 NTDALLTAYRGVVQSCLRYGIIFWGNSMQ 33
+ + ++ + L YG WG Q
Sbjct: 760 SISNKIIIFKTIFNPILMYGSPVWGRCAQ 788
Score = 37.1 bits (82), Expect = 0.026
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3
Query: 558 RKITYGVPQGSVLGPLLFIIYINDFPNS 475
R + GVPQGSVLGP LF I+ +D P +
Sbjct: 608 RILNAGVPQGSVLGPTLFNIFTHDIPQA 635
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 46.0 bits (104), Expect = 6e-05
Identities = 29/107 (27%), Positives = 48/107 (44%)
Frame = -1
Query: 452 FADDSTKTIRCRNYILYEHDINSTLHSIISWLDKNNLIINLDKTKFMQFYQRNKYINLTI 273
FADD T + + N + + I WL+K L I KT+ + R + +
Sbjct: 645 FADDVAITAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEVVLLSSRKSVECMRV 704
Query: 272 YNNNNHIYETENIDFLGVKIDNKLDWKSHTDGLCKRVSSSAYALFKL 132
I E + +LGV ID +L +K+H K+ + +A AL ++
Sbjct: 705 EVKGVEIASAETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARI 751
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = -3
Query: 555 KITYGVPQGSVLGPLLFII 499
+++ GVPQGSVLGP+L+ I
Sbjct: 608 QVSAGVPQGSVLGPILWNI 626
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 40.7 bits (91), Expect = 0.002
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Frame = -1
Query: 461 MTLFADDSTKTIRCRNYILYEHDINSTLHSIISWLDKNNLIINLDKTKFMQFYQRNKYIN 282
++L+ADD+ + +N L I SW + + ++K + + ++ +
Sbjct: 671 ISLYADDAIIFTKIKNINTVREKFLEILQEINSWGATSGASLAIEKCQTLHICRKQRCNL 730
Query: 281 LTIYNNNNHIYETENIDFLGVKIDNKLDWKSHTDGLCKRVSSSAYALFKLS---SILNTD 111
I N+ I + + LG+ D KL +K H L K++ + + LS S ++
Sbjct: 731 SDIVFNSRTIKDVNFLKILGITFDPKLLFKQHCQTLRKQLETRFNIIKFLSSKYSYIHIK 790
Query: 110 ALLTAYRGVVQSCLRYGIIFWG 45
L+ R ++ S + YG+ +G
Sbjct: 791 TLIDITRALMLSKIDYGLPIFG 812
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 40.3 bits (90), Expect = 0.003
Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 3/142 (2%)
Frame = -1
Query: 461 MTLFADDSTKTIRCRNYILYEHDINSTLHSIISWLDKNNLIINLDKTKFMQFYQRNKYIN 282
+ FADD T R R I + W + N+ IN K+ + F + +
Sbjct: 671 LATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCFTLKRR-TP 729
Query: 281 LTIYNNNNHIYETENIDFLGVKIDNKLDWKSHTDGLCKRVSSSA---YALFKLSSILNTD 111
+Y + + +LGV +D +L + H + R+ + Y L S L+
Sbjct: 730 PPVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLS 789
Query: 110 ALLTAYRGVVQSCLRYGIIFWG 45
LT Y+ ++ +YG WG
Sbjct: 790 NKLTIYKQILAPNWKYGCQIWG 811
Score = 38.3 bits (85), Expect = 0.011
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -3
Query: 552 ITYGVPQGSVLGPLLFIIYINDFP 481
+ GVPQGSVLGPLL+ +Y +D P
Sbjct: 636 VAAGVPQGSVLGPLLYCLYSHDMP 659
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 39.5 bits (88), Expect = 0.005
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = -1
Query: 380 LHSIISWLDKNNLIINLDKTKFMQFYQRNKYI--NLTIYNNNNHIYETENIDFLGVKIDN 207
L + W DK + +N KT + F +N ++ + I + +LGV +D+
Sbjct: 759 LKTFSDWADKWGISVNAAKTGHVIFTLKNDLPTNSMNVKIKGQTIKKESKQSYLGVTLDS 818
Query: 206 KLDWKSHTDGLCKRVSSSAYALFKLSSILN------TDALLTAYRGVVQSCLRYGIIFWG 45
KL SH L + S+AY KL+ ILN T + + V+ +Y I WG
Sbjct: 819 KLTLSSHVTKLLGKY-STAYR--KLTWILNGRSKLPTKTKILILKSVLSPIWQYAIAAWG 875
Query: 44 NSMQKDQVFKAQ 9
+ Q+ + Q
Sbjct: 876 PLVTDAQIRRVQ 887
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3
Query: 555 KITYGVPQGSVLGPLLFIIYINDFP 481
+I GVPQGS LGPLL+ I+ +D P
Sbjct: 693 QIGAGVPQGSNLGPLLYSIFSSDMP 717
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 38.3 bits (85), Expect = 0.011
Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 3/139 (2%)
Frame = -1
Query: 452 FADDSTKTIRCRNYILYEHDINSTLHSIISWLDKNNLIINLDKTKFMQFYQRNKYINLTI 273
+ADD+ + ++ + + L + W + N+ IN +K + F R +
Sbjct: 679 YADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSCP-GV 737
Query: 272 YNNNNHIYETENIDFLGVKIDNKLDWKSHTDGLCKRVSSSAYALFKLSSILNTDAL---L 102
N I + +LG+ +D KL + H + + + + L + N +L +
Sbjct: 738 SLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKV 797
Query: 101 TAYRGVVQSCLRYGIIFWG 45
Y+ ++ CL YG+ +G
Sbjct: 798 NIYKSILAPCLFYGLQVYG 816
Score = 35.9 bits (79), Expect = 0.059
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -3
Query: 558 RKITYGVPQGSVLGPLLFIIYINDFP 481
+ I GVPQGSVLGP L+ ++ +D P
Sbjct: 636 KPIAAGVPQGSVLGPTLYSVFASDMP 661
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 38.3 bits (85), Expect = 0.011
Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 3/139 (2%)
Frame = -1
Query: 452 FADDSTKTIRCRNYILYEHDINSTLHSIISWLDKNNLIINLDKTKFMQFYQRNKYINLTI 273
+ADD+ + ++ + + L + W + N+ IN +K + F R +
Sbjct: 481 YADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSCP-GV 539
Query: 272 YNNNNHIYETENIDFLGVKIDNKLDWKSHTDGLCKRVSSSAYALFKLSSILNTDAL---L 102
N I + +LG+ +D KL + H + + + + L + N +L +
Sbjct: 540 SLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKV 599
Query: 101 TAYRGVVQSCLRYGIIFWG 45
Y+ ++ CL YG+ +G
Sbjct: 600 NIYKSILAPCLFYGLQVYG 618
Score = 35.9 bits (79), Expect = 0.059
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -3
Query: 558 RKITYGVPQGSVLGPLLFIIYINDFP 481
+ I GVPQGSVLGP L+ ++ +D P
Sbjct: 438 KPIAAGVPQGSVLGPTLYSVFASDMP 463
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 38.3 bits (85), Expect = 0.011
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -3
Query: 552 ITYGVPQGSVLGPLLFIIYINDFPNSIDHPY 460
I GVPQGS+LGP+L+ IY +D P I Y
Sbjct: 238 IRAGVPQGSILGPVLYSIYSSDMPYPIVKDY 268
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 38.3 bits (85), Expect = 0.011
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -3
Query: 552 ITYGVPQGSVLGPLLFIIYINDFPNSIDHPY 460
I GVPQGS+LGP+L+ IY +D P I Y
Sbjct: 685 IRAGVPQGSILGPVLYSIYSSDMPYPIVKDY 715
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 38.3 bits (85), Expect = 0.011
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -3
Query: 552 ITYGVPQGSVLGPLLFIIYINDFPNSIDHPY 460
I GVPQGS+LGP+L+ IY +D P I Y
Sbjct: 685 IRAGVPQGSILGPVLYSIYSSDMPYPIVKDY 715
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 38.3 bits (85), Expect = 0.011
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -3
Query: 552 ITYGVPQGSVLGPLLFIIYINDFPNSIDHPY 460
I GVPQGS+LGP+L+ IY +D P I Y
Sbjct: 685 IRAGVPQGSILGPVLYSIYSSDMPYPIVKDY 715
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 37.1 bits (82), Expect = 0.026
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
Frame = -1
Query: 380 LHSIISWLDKNNLIINLDKTKFMQFYQRNKY-INLTIYNNNNHIYETENID-FLGVKIDN 207
L S W DK + +N KT + F +N +L + + E+ +LGV +D+
Sbjct: 747 LKSFSDWADKWGISVNAAKTGHVIFTLKNDLPTSLRTMKIKGQVIKIESKQSYLGVILDS 806
Query: 206 KLDWKSHTDGLCKRVSSSAYA----LFKLSSILNTDALLTAYRGVVQSCLRYGIIFWGNS 39
KL SH L + ++AY + S L T + + V+ +Y I WG
Sbjct: 807 KLTLSSHVTKLMGKY-TTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYAIAAWGPL 865
Query: 38 MQKDQVFKAQ 9
+ Q+ + Q
Sbjct: 866 VTDAQIRRIQ 875
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -3
Query: 555 KITYGVPQGSVLGPLLFIIYINDFP 481
+I GVPQGS LGPLL+ I+ +D P
Sbjct: 681 QIGAGVPQGSNLGPLLYSIFSSDMP 705
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 37.1 bits (82), Expect = 0.026
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -3
Query: 552 ITYGVPQGSVLGPLLFIIYINDFPNS 475
I GVPQGSVLGP+L+ +Y D P +
Sbjct: 173 IEAGVPQGSVLGPILYTLYTADIPTN 198
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 36.3 bits (80), Expect = 0.045
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -3
Query: 558 RKITYGVPQGSVLGPLLFIIYINDFP-NSIDHPYDP 454
R + GVPQGSVLGPLL+ ++ D P + H DP
Sbjct: 635 RVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADP 670
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 35.9 bits (79), Expect = 0.059
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -3
Query: 555 KITYGVPQGSVLGPLLFIIYINDFPNSIDHPYDP 454
+I GVPQGS LGP+L+ I+ +D P + H Y P
Sbjct: 565 QIGAGVPQGSNLGPILYSIFSSDMP--LPHIYHP 596
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 35.9 bits (79), Expect = 0.059
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -3
Query: 555 KITYGVPQGSVLGPLLFIIYINDFPNSIDHPYDP 454
+I GVPQGS LGP+L+ I+ +D P + H Y P
Sbjct: 681 QIGAGVPQGSNLGPILYSIFSSDMP--LPHIYHP 712
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 35.9 bits (79), Expect = 0.059
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -3
Query: 555 KITYGVPQGSVLGPLLFIIYINDFPNSIDHPYDP 454
+I GVPQGS LGP+L+ I+ +D P + H Y P
Sbjct: 681 QIGAGVPQGSNLGPILYSIFSSDMP--LPHIYHP 712
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 35.9 bits (79), Expect = 0.059
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -3
Query: 555 KITYGVPQGSVLGPLLFIIYINDFPNSIDHPYDP 454
+I GVPQGS LGP+L+ I+ +D P + H Y P
Sbjct: 643 QIGAGVPQGSNLGPILYSIFSSDMP--LPHIYHP 674
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 35.9 bits (79), Expect = 0.059
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -3
Query: 555 KITYGVPQGSVLGPLLFIIYINDFPNSIDHPYDP 454
+I GVPQGS LGP+L+ I+ +D P + H Y P
Sbjct: 681 QIGAGVPQGSNLGPILYSIFSSDMP--LPHIYHP 712
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 33.1 bits (72), Expect = 0.42
Identities = 22/89 (24%), Positives = 36/89 (40%)
Frame = -1
Query: 452 FADDSTKTIRCRNYILYEHDINSTLHSIISWLDKNNLIINLDKTKFMQFYQRNKYINLTI 273
FADD + + E N + +I WL L + +KTK + R T+
Sbjct: 83 FADDVALLVVDKYPGKAEEMCNRNIRAIEHWLSSMGLELAPEKTKAVLISSRKAVETATV 142
Query: 272 YNNNNHIYETENIDFLGVKIDNKLDWKSH 186
+ + I +L V ID +L ++ H
Sbjct: 143 EVGGTLVSSSRAIKYLEVMIDTRLSFREH 171
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -3
Query: 555 KITYGVPQGSVLGPLLF 505
++T GVPQGSVLGPLL+
Sbjct: 46 QVTGGVPQGSVLGPLLW 62
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,236,897
Number of Sequences: 53049
Number of extensions: 573620
Number of successful extensions: 1243
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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