BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3610
(752 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 26 0.44
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 25 0.76
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 25 1.0
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 24 1.3
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 24 1.3
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 24 1.3
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 24 1.3
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.3
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 24 1.8
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 3.1
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 4.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 4.1
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 4.1
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 4.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 4.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 4.1
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 5.4
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 5.4
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 5.4
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 5.4
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 7.1
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 7.1
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 7.1
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 7.1
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 7.1
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 7.1
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 7.1
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 7.1
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 25.8 bits (54), Expect = 0.44
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 655 YWSLI*KIGIQYTEISNID 599
YW LI +I + Y EIS+ID
Sbjct: 12 YWYLILQIALVYGEISDID 30
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 25.0 bits (52), Expect = 0.76
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 193 NLIQTDCVNVSAPRPMHSLNYPP 125
N+I + + V P P+H N+PP
Sbjct: 335 NIINIEQIPVPVPVPIHCGNFPP 357
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.6 bits (51), Expect = 1.0
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1
Query: 284 NLTIYNNNNHIYETEN-IDFLGVKIDNKLDWKSH 186
N TI+NNNN+ Y N ++ + KL +K++
Sbjct: 87 NKTIHNNNNYKYNYNNKYNYNNNNYNKKLYYKNY 120
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 284 NLTIYNNNNHIYETENIDF 228
N TI+NNNN+ Y N ++
Sbjct: 87 NRTIHNNNNYKYNYNNNNY 105
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 284 NLTIYNNNNHIYETENIDF 228
N TI+NNNN+ Y N ++
Sbjct: 87 NKTIHNNNNYKYNYNNNNY 105
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 284 NLTIYNNNNHIYETENIDF 228
N TI+NNNN+ Y N ++
Sbjct: 87 NKTIHNNNNYKYNYNNNNY 105
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 284 NLTIYNNNNHIYETENIDF 228
N TI+NNNN+ Y N ++
Sbjct: 87 NKTIHNNNNYKYNYNNNNY 105
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 284 NLTIYNNNNHIYETENIDF 228
N TI+NNNN+ Y N ++
Sbjct: 320 NKTIHNNNNYKYNYNNNNY 338
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 193 NLIQTDCVNVSAPRPMHSLNYPP 125
N+I + + V P P++ N+PP
Sbjct: 357 NIINIEQIPVPVPVPIYCGNFPP 379
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 284 NLTIYNNNNHIYETEN 237
N TI+NNNN+ Y N
Sbjct: 87 NKTIHNNNNYKYNYNN 102
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 23.0 bits (47), Expect = 3.1
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 45 SPENYSISKTGLNYTTICS**GVCV*NGG*FKECIGRGADTFTQSVC 185
SP N SI++TGL+ S +C GG + + RG D Q+ C
Sbjct: 334 SPSNPSITRTGLSSVRDSS--IIC---GGNKRSQVFRGRDANRQNSC 375
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 193 NLIQTDCVNVSAPRPMHSLNYPP 125
N+I + + V P P++ N+PP
Sbjct: 115 NIINIEQIPVPVPVPVYCGNFPP 137
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 193 NLIQTDCVNVSAPRPMHSLNYPP 125
N+I + + V P P++ N+PP
Sbjct: 115 NIINIEQIPVPVPVPVYCGNFPP 137
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 193 NLIQTDCVNVSAPRPMHSLNYPP 125
N+I + + V P P++ N+PP
Sbjct: 326 NIINIEQIPVPVPVPIYCGNFPP 348
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 193 NLIQTDCVNVSAPRPMHSLNYPP 125
N+I + + V P P++ N+PP
Sbjct: 337 NIINIEQIPVPVPVPIYCGNFPP 359
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 305 YQRNKYINLTIYNNNNH 255
Y+ + Y N YNNNN+
Sbjct: 322 YKYSNYNNYNNYNNNNY 338
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 193 NLIQTDCVNVSAPRPMHSLNYPP 125
N+I + + V P P++ N+PP
Sbjct: 355 NIINIEQIPVPVPVPIYCGNFPP 377
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 284 NLTIYNNNNHIYETENIDFLGVKIDNKLDWK 192
N TI+NNNN+ N ++ +N ++K
Sbjct: 320 NKTIHNNNNYNNNNYNNNYNNYNNNNYNNYK 350
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 293 KYINLTIYNNNNH 255
KY N YNNNN+
Sbjct: 90 KYSNYNNYNNNNY 102
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 293 KYINLTIYNNNNH 255
KY N YNNNN+
Sbjct: 90 KYSNYNNYNNNNY 102
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 293 KYINLTIYNNNNH 255
KY N YNNNN+
Sbjct: 90 KYSNYNNYNNNNY 102
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 293 KYINLTIYNNNNH 255
KY N YNNNN+
Sbjct: 90 KYSNYNNYNNNNY 102
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 296 NKYINLTIYNNNNHIYETENIDFL 225
N Y N + YNNNN+ NI+++
Sbjct: 87 NNY-NYSNYNNNNYKQLCYNINYI 109
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 296 NKYINLTIYNNNNHIYETENIDFL 225
N Y N + YNNNN+ NI+++
Sbjct: 87 NNY-NYSNYNNNNYKQLCYNINYI 109
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 296 NKYINLTIYNNNNHIYETENIDFL 225
N Y N + YNNNN+ NI+++
Sbjct: 87 NNY-NYSNYNNNNYKQLCYNINYI 109
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 296 NKYINLTIYNNNNHIYETENIDFL 225
N Y N + YNNNN+ NI+++
Sbjct: 87 NNY-NYSNYNNNNYKQLCYNINYI 109
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 296 NKYINLTIYNNNNHIYETENIDFL 225
N Y N + YNNNN+ NI+++
Sbjct: 87 NNY-NYSNYNNNNYKQLCYNINYI 109
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/15 (60%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
Frame = -1
Query: 296 NKYI-NLTIYNNNNH 255
N YI N++ YNNNN+
Sbjct: 87 NNYISNISNYNNNNN 101
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 305 YQRNKYINLTIYNNNNH 255
Y N Y N YNNNN+
Sbjct: 96 YNNNNYNNYN-YNNNNY 111
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/15 (60%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
Frame = -1
Query: 296 NKYI-NLTIYNNNNH 255
N YI N++ YNNNN+
Sbjct: 325 NNYISNISNYNNNNN 339
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,079
Number of Sequences: 438
Number of extensions: 4477
Number of successful extensions: 41
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -