Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3609
         (704 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0845 - 21979581-21981281                                         28   6.3  
10_08_0233 - 16061182-16061714,16062765-16063578                       28   8.3  

>07_03_0845 - 21979581-21981281
          Length = 566

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 246 YISVLGYLGSTFRAMCVFG-VIW 311
           ++ ++  LGSTF A+C FG +IW
Sbjct: 448 HMRLIAVLGSTFVALCAFGAIIW 470


>10_08_0233 - 16061182-16061714,16062765-16063578
          Length = 448

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = +1

Query: 508 CG*FNSHASFGTSRSSEGLRFSLVPYVLWGVL*GIV*DDPMISFLPSHRPPPELSP 675
           C  F S    G+   +  L+ S+   V+   L G+V  DPM S      PPP L P
Sbjct: 179 CQRFLSPIDSGSQAFARQLQPSVAAAVVAPELIGVVGSDPMTSGKRKALPPPSLRP 234


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,475,167
Number of Sequences: 37544
Number of extensions: 470313
Number of successful extensions: 1185
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)