Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3607
(610 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 91 1e-19
SPCP1E11.07c |cwf18||complexed with Cdc5 protein Cwf18 |Schizosa... 28 0.93
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 27 2.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 2.8
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 25 6.5
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 25 6.5
SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosacc... 25 8.7
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 25 8.7
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 91.1 bits (216), Expect = 1e-19
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Frame = -3
Query: 560 AVCKVFSLDPTLDEEMTLVRRNLLRLIGVGEFSSAAEWREPCAACVLTELTCRVCN---- 393
++C VF L L+ E+ ++++LL L+ + EFS+ A +R P L ++ C+ C
Sbjct: 2018 SICAVFELSHDLNLEVRFLKKSLLSLLQIQEFSTQAVFRYPSRRLSLDQIPCKQCGVHQD 2077
Query: 392 -----HXXXXXXXXXXXXDTERPACLCPTCGTAYDNQEIEWRLIETMNKRTMAYTLQDLI 228
H C +C YD E L++ + + Y LQDLI
Sbjct: 2078 FDLCLHEHLWPTRDDMGTLVFSDGWSCSSCNLVYDRWVFEETLVDNLYHQLTLYQLQDLI 2137
Query: 227 CSRCHQVKRENLSVVCDCAGDFSLMVPVTEIKDQLMTFKTIAEYYQMPLLLEQI 66
CS+C VK+ +L C C+G++ L + T+ ++ L ++++A++Y+ +L +
Sbjct: 2138 CSKCKTVKQWSLKERCSCSGEWVLQLSPTKFREMLNVYQSVADFYEFSILQNSV 2191
>SPCP1E11.07c |cwf18||complexed with Cdc5 protein Cwf18
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 142
Score = 28.3 bits (60), Expect = 0.93
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 326 PTCGTAYDNQEIEWRLIETMNKRTMAYTLQDLICSRCHQVKR 201
PT D +E R +ET N+ +A+ +Q LI R H ++
Sbjct: 101 PTWDLERDLKE-RMRSLETQNQNAIAFYIQQLISERAHSTEK 141
>SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1150
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/58 (24%), Positives = 25/58 (43%)
Frame = +1
Query: 409 VSSVSTHAAHGSRHSAALLNSPTPIRRSRLRRTSVISSSKVGSRENTLQTAVDERGGP 582
+S +S + +H+A+ PIRR TS + S + N+L + + P
Sbjct: 1073 ISQMSLDERNTPKHTASTKRKRQPIRRVTTNLTSDVPSGSEVADTNSLSSTTKDEASP 1130
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SSS + S +++ P+ +S
Sbjct: 386 SSSVLNSSTPITSSSILNTSTPITSSSVLNSSTPITSSSILNSSTPITSS 435
Score = 26.6 bits (56), Expect = 2.8
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SSS + S + V P+ +S
Sbjct: 1982 SSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTPITSSTVVNTSTPITSS 2031
Score = 26.6 bits (56), Expect = 2.8
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRL--RRTSVISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS+ SSS + S ++V P+ +S
Sbjct: 2402 SSSVLNSSTPITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSSTPITSS 2451
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SS+ V S ++V P+ +S
Sbjct: 818 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSSVLNSSTPITSS 867
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SS+ V S + V P+ +S
Sbjct: 1142 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSS 1191
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SS+ V S + V P+ +S
Sbjct: 1406 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSS 1455
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SS+ V S + V P+ +S
Sbjct: 1454 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSS 1503
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SS+ V S + V P+ +S
Sbjct: 1706 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSS 1755
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SS+ V S + V P+ +S
Sbjct: 2246 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSS 2295
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SSS + S + V P+ +S
Sbjct: 2318 SSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSS 2367
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SSS + S + V P+ +S
Sbjct: 2726 SSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSS 2775
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SSS + S + V P+ +S
Sbjct: 3242 SSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSS 3291
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRL--RRTSVISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS+ SSS + S + V P+ +S
Sbjct: 518 SSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSS 567
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SSS + S + V P+ +S
Sbjct: 770 SSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVLNSSTPITSS 819
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS + SSS + S + V P+ +S
Sbjct: 854 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSS 903
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRL--RRTSVISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS+ SSS + S + V P+ +S
Sbjct: 1286 SSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSS 1335
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS + SSS + S + V P+ +S
Sbjct: 1790 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSS 1839
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS + SSS + S ++V P+ +S
Sbjct: 1958 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNTSTPITSS 2007
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS + SSS + S + V P+ +S
Sbjct: 2150 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSS 2199
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS + SSS + S + V P+ +S
Sbjct: 2462 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSS 2511
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SS+ V S + V P+ +S
Sbjct: 2486 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSS 2535
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRL--RRTSVISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS+ SSS + S + V P+ +S
Sbjct: 2630 SSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSS 2679
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SS+ V S + V P+ +S
Sbjct: 2786 SSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSS 2835
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRL--RRTSVISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS+ SSS + S + V P+ +S
Sbjct: 2858 SSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSS 2907
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRL--RRTSVISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS+ SSS + S + V P+ +S
Sbjct: 2954 SSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTSTPITSS 3003
Score = 25.8 bits (54), Expect = 5.0
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS + SSS + S +++ P+ +S
Sbjct: 3062 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSSIVNSSTPITSS 3111
Score = 25.8 bits (54), Expect = 5.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS + SSS + S ++V P+ +S
Sbjct: 3194 SSSVLNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSSVLNSSTPITSS 3243
Score = 25.4 bits (53), Expect = 6.5
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS + SSS + S +++ P+ +S
Sbjct: 722 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSILNSSTPITSS 771
Score = 25.4 bits (53), Expect = 6.5
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + +S + SSS + S + V P+ +S
Sbjct: 1226 SSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNSSTPITSS 1275
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SSS V S + P+ +S
Sbjct: 1550 SSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSS 1599
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS + SSS + S + V P+ +S
Sbjct: 1598 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSS 1647
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+ +LNS TPI S TS + SS+ V S + V P+ +S
Sbjct: 1634 SSTVLNSSTPITSSTALNTSPPITSSTVVNSSTPITSSTVVNTSTPITSS 1683
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS + SSS + S + V P+ +S
Sbjct: 1862 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSS 1911
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S TS + SSS + S + V P+ +S
Sbjct: 2054 SSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSS 2103
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + TS + SS+ + + + ++V P+ +S
Sbjct: 2342 SSSVLNSSTPITSSTVVNTSTPITSSTALNTSTSITSSSVLNSSTPITSS 2391
Score = 25.4 bits (53), Expect = 6.5
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS-VISSSKVGSRENTLQTAV 564
S+++LNS TPI S + +S VI SS V S +++ ++V
Sbjct: 3470 SSSVLNSSTPISSSTVITSSVVIGSSSVLSYASSIVSSV 3508
Score = 25.0 bits (52), Expect = 8.7
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + +S + SSS + S + V P+ +S
Sbjct: 1082 SSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSS 1131
Score = 25.0 bits (52), Expect = 8.7
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + +S + SS+ V S ++V P+ +S
Sbjct: 1922 SSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSS 1971
Score = 25.0 bits (52), Expect = 8.7
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + +S + SS+ V S ++V P+ +S
Sbjct: 2114 SSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSS 2163
Score = 25.0 bits (52), Expect = 8.7
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +1
Query: 451 SAALLNSPTPIRRSRLRRTS--VISSSKVGSRENTLQTAVDERGGPVPNS 594
S+++LNS TPI S + +S + SS+ V S ++V P+ +S
Sbjct: 2426 SSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSS 2475
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 155 MVPVTEIKDQLMTFKTIAEYYQMPLLL 75
++P I Q+ F + A+YYQ P L
Sbjct: 158 LIPSGPILSQIREFLSTADYYQRPFFL 184
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 204 FYLVTSATYKILQRIRHRTFVHRLD 278
F + T KILQR+RH+ V L+
Sbjct: 317 FPITTVREVKILQRLRHKNIVRLLE 341
>SPCP1E11.04c |pal1||membrane associated protein Pal1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 421 STHAAHGSRHSAALLNSPTPIRRSRLRRTSVISSSK 528
STH A SRH + N +P +S L+ I K
Sbjct: 108 STHVASSSRHRSPSHNDSSPSTQSSLKSRGSIRRYK 143
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 469 SPTPIRRSRLRRTSVISSSKVGSRENTLQT 558
SP P RRSR S+ S V S N+ +T
Sbjct: 537 SPQPTRRSRTPIRSLSGRSSVASSRNSSRT 566
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,225,698
Number of Sequences: 5004
Number of extensions: 41138
Number of successful extensions: 247
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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