Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3592
(398 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protei... 30 0.70
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 1.6
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z68317-2|CAA92690.2| 980|Caenorhabditis elegans Hypothetical pr... 28 2.8
U40798-7|AAA81477.1| 342|Caenorhabditis elegans Hypothetical pr... 27 3.7
AL021503-6|CAA16424.2| 459|Caenorhabditis elegans Hypothetical ... 27 3.7
AC024824-4|AAY55895.1| 127|Caenorhabditis elegans Hypothetical ... 27 5.0
Z70780-5|CAD91633.1| 779|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z70780-4|CAD54137.2| 786|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z70780-3|CAA94828.2| 828|Caenorhabditis elegans Hypothetical pr... 27 6.5
U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical pr... 27 6.5
U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical pr... 27 6.5
AC098856-7|AAL27253.2| 155|Caenorhabditis elegans Hypothetical ... 27 6.5
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z73103-14|CAL22701.1| 387|Caenorhabditis elegans Hypothetical p... 26 8.7
Z73103-13|CAA97430.1| 340|Caenorhabditis elegans Hypothetical p... 26 8.7
Z68341-7|CAL22703.1| 387|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z68341-6|CAA92769.1| 340|Caenorhabditis elegans Hypothetical pr... 26 8.7
X76113-1|CAA53719.1| 340|Caenorhabditis elegans phosphate carri... 26 8.7
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 26 8.7
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 26 8.7
>L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protein
1.2, isoform a protein.
Length = 555
Score = 29.9 bits (64), Expect = 0.70
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = -2
Query: 382 GPPVHPACDRRDPLRSPTPARRPHDRILHRLAGQLPGAEFSSDTRVQVPN*PAGGGEHRF 203
G +HP ++ + + TP+RR L+ + G F D +Q+ + G GEH
Sbjct: 17 GRMIHPWLRKKQDMLADTPSRREGMTYEEELSKRQQGGVFIFDIAMQLTH---GKGEHGL 73
Query: 202 TGSPYTL 182
+G TL
Sbjct: 74 SGVAATL 80
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical protein
F38E11.5 protein.
Length = 1000
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = -2
Query: 388 MEGPPVHPACDRRDPLRSPTPARRPHDRILHRLAGQLPGAEFSSDTR-VQVPN*PAGGGE 212
++ PP + P+R P+P R P + EF D + V VP
Sbjct: 870 LKAPPPPSVARQPSPVRQPSPIREPSPIREPEPEEEEEQEEFDDDQQEVHVPANQESADA 929
Query: 211 HRFTGSPYTLVKQSRP 164
H + +P +++ SRP
Sbjct: 930 HGTSKTPDVVLETSRP 945
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 220 RPPVSWGPEPGCHY*TPPREAVPPTG 297
RPP + P PG Y PP A PP G
Sbjct: 743 RPPAGFAPPPGAPYGYPP-GAPPPAG 767
>Z68317-2|CAA92690.2| 980|Caenorhabditis elegans Hypothetical
protein T01H3.2 protein.
Length = 980
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 214 RRRPPVSWGPEPGCHY*TPPREAVPPTGVKSCRAVVV 324
RR+ P CH +PP + V + ++SC +V
Sbjct: 753 RRQAKFELNKSPWCHVESPPIQCVRVSKIESCEGTIV 789
>U40798-7|AAA81477.1| 342|Caenorhabditis elegans Hypothetical
protein R13A1.8 protein.
Length = 342
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 186 PSSNNHVPRAHTHVCSSCSRYRQDSPPTRKRKGKE 82
PS N +V H SS + +PPT + GKE
Sbjct: 29 PSQNQNVKNCHMPTGSSSNNTSSTTPPTIQINGKE 63
>AL021503-6|CAA16424.2| 459|Caenorhabditis elegans Hypothetical
protein Y68A4A.10a protein.
Length = 459
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 371 PPCVR-SPGSTPVSDSGTTTARQDFTPVG 288
PPC +P + P+SD GT TA T G
Sbjct: 242 PPCQTCTPFTDPMSDKGTCTATTGMTSTG 270
>AC024824-4|AAY55895.1| 127|Caenorhabditis elegans Hypothetical
protein Y55B1BR.5 protein.
Length = 127
Score = 27.1 bits (57), Expect = 5.0
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = -2
Query: 316 PHDRILHRLAGQLPGAEFSSDTRVQVPN*PAGGGEHRFTGSPYTLVKQSRPASSHARLLL 137
PH ++ R+ + + SSD P P GG R T S Y V + S RLL
Sbjct: 40 PHLQV--RMTHRNSSSNGSSDRFELEPVEPTEGGPQRSTSSDYCKVDKKHSISGTTRLLK 97
Query: 136 MFQVSPR 116
+S +
Sbjct: 98 WLGISDK 104
>Z70780-5|CAD91633.1| 779|Caenorhabditis elegans Hypothetical
protein F46B6.5c protein.
Length = 779
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 367 PACDRRDPLRSPTPARRPHDRILHR 293
P R+ P+ SP+ A+R HD + R
Sbjct: 600 PKDPRKQPIGSPSSAKRKHDDVARR 624
>Z70780-4|CAD54137.2| 786|Caenorhabditis elegans Hypothetical
protein F46B6.5b protein.
Length = 786
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 367 PACDRRDPLRSPTPARRPHDRILHR 293
P R+ P+ SP+ A+R HD + R
Sbjct: 558 PKDPRKQPIGSPSSAKRKHDDVARR 582
>Z70780-3|CAA94828.2| 828|Caenorhabditis elegans Hypothetical
protein F46B6.5a protein.
Length = 828
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 367 PACDRRDPLRSPTPARRPHDRILHR 293
P R+ P+ SP+ A+R HD + R
Sbjct: 600 PKDPRKQPIGSPSSAKRKHDDVARR 624
>U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical
protein R08E3.4a protein.
Length = 447
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -3
Query: 216 ANTVSLGLPIPSSNNHVPRAHTHVCSSCSRYRQDSPPTRKRKGKE 82
+++VS+ P PS +H P A+ SS S ++ PT +++ +E
Sbjct: 377 SSSVSVSAPSPSEQSHSPPANE---SSLSLTEKEKSPTPEKEDEE 418
>U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical
protein R08E3.4b protein.
Length = 480
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -3
Query: 216 ANTVSLGLPIPSSNNHVPRAHTHVCSSCSRYRQDSPPTRKRKGKE 82
+++VS+ P PS +H P A+ SS S ++ PT +++ +E
Sbjct: 377 SSSVSVSAPSPSEQSHSPPANE---SSLSLTEKEKSPTPEKEDEE 418
>AC098856-7|AAL27253.2| 155|Caenorhabditis elegans Hypothetical
protein Y37F4.8 protein.
Length = 155
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 277 EAVPPTGVKSCRAVVVPESE-TGVDPGDRTQ 366
+A+PP G SC V + ESE G+ ++T+
Sbjct: 55 QALPPKGCTSCLMVPIEESEKAGISSTNKTR 85
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = -2
Query: 274 GAEFSSDTRVQVPN*PAGGGEHRFTGSPYTLVKQSRPASSHARLLLMFQVSPRFTP 107
G+ D R VPN P G + G P + Q + H + M ++ PR P
Sbjct: 689 GSTGDVDMRTMVPNQPPSGEPEHWRGPP-PVSHQQQSQQQHPPPINMQRMDPRRDP 743
>Z73103-14|CAL22701.1| 387|Caenorhabditis elegans Hypothetical
protein F01G4.6b protein.
Length = 387
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 280 AVPPTGVKSCRAVVVPESETGVDPGDRT 363
A+ P + CR V PE TG+ G RT
Sbjct: 107 AIVPLDLVKCRIQVNPEKYTGIATGFRT 134
>Z73103-13|CAA97430.1| 340|Caenorhabditis elegans Hypothetical
protein F01G4.6a protein.
Length = 340
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 280 AVPPTGVKSCRAVVVPESETGVDPGDRT 363
A+ P + CR V PE TG+ G RT
Sbjct: 60 AIVPLDLVKCRIQVNPEKYTGIATGFRT 87
>Z68341-7|CAL22703.1| 387|Caenorhabditis elegans Hypothetical
protein F01G4.6b protein.
Length = 387
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 280 AVPPTGVKSCRAVVVPESETGVDPGDRT 363
A+ P + CR V PE TG+ G RT
Sbjct: 107 AIVPLDLVKCRIQVNPEKYTGIATGFRT 134
>Z68341-6|CAA92769.1| 340|Caenorhabditis elegans Hypothetical
protein F01G4.6a protein.
Length = 340
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 280 AVPPTGVKSCRAVVVPESETGVDPGDRT 363
A+ P + CR V PE TG+ G RT
Sbjct: 60 AIVPLDLVKCRIQVNPEKYTGIATGFRT 87
>X76113-1|CAA53719.1| 340|Caenorhabditis elegans phosphate carrier
protein protein.
Length = 340
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 280 AVPPTGVKSCRAVVVPESETGVDPGDRT 363
A+ P + CR V PE TG+ G RT
Sbjct: 60 AIVPLDLVKCRIQVNPEKYTGIATGFRT 87
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 26.2 bits (55), Expect = 8.7
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Frame = -2
Query: 382 GPP--VHPACDRRD-PLRSPTPARRPH 311
GPP HP RR P R P P+R PH
Sbjct: 94 GPPHRPHPHPSRRPRPTRLPRPSRSPH 120
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 26.2 bits (55), Expect = 8.7
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 241 PEPGCHY*TPPREAVPPTGVKSCRAVVVPESETGVDPGDRTQGGLGALPCPA 396
P CH TPP P G P+ G PG GG P PA
Sbjct: 143 PAQPCHPITPPPCRPCPQGPPGAPGSPGPQGNAGA-PGQPGHGGGSGAPGPA 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,498,313
Number of Sequences: 27780
Number of extensions: 249174
Number of successful extensions: 948
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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