Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3585
(427 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1246 - 35226759-35226860,35227521-35227715,35227804-352283... 128 2e-30
08_02_0893 + 22327485-22327671,22327756-22328627 111 3e-25
01_03_0220 - 13905808-13905831,13906694-13906885,13906960-139075... 105 1e-23
06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143 102 1e-22
03_06_0366 + 33408671-33408745,33409342-33409398,33410398-334104... 77 8e-15
03_02_0491 + 8854438-8854657,8854897-8854942,8855268-8855307,885... 76 1e-14
06_03_0542 + 21959533-21959785,21960732-21960846,21962815-219629... 75 2e-14
02_02_0075 - 6572385-6572558,6573416-6573607,6574553-6574630,657... 75 3e-14
01_06_0339 + 28549449-28549529,28549768-28549914,28550027-285500... 73 1e-13
05_01_0319 + 2503963-2504176,2504316-2504376,2504691-2504769,250... 70 9e-13
12_02_1128 - 26341118-26341204,26341302-26341441,26341567-263416... 68 4e-12
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 67 5e-12
10_07_0165 + 13740611-13740706,13741159-13741215,13741523-137416... 62 1e-10
03_01_0473 - 3639533-3639598,3639848-3639955,3640037-3640126,364... 62 1e-10
09_02_0241 + 6179869-6180116,6180406-6180436,6182038-6182190,618... 56 9e-09
05_02_0083 + 6450694-6450766,6451391-6451560,6451633-6451704,645... 56 9e-09
08_02_1232 + 25429955-25430392,25430885-25431388,25432657-254328... 36 0.010
12_01_0671 - 5702051-5702159,5702493-5703216,5703910-5704476,570... 28 3.6
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643... 27 4.8
08_02_1159 + 24773328-24773994,24775430-24775558,24776080-247762... 27 6.3
>02_05_1246 -
35226759-35226860,35227521-35227715,35227804-35228363,
35229299-35229476
Length = 344
Score = 128 bits (309), Expect = 2e-30
Identities = 56/78 (71%), Positives = 66/78 (84%)
Frame = +3
Query: 192 EVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKMCGDIHGQYYDLLRLFE 371
EV+ KPG N QL+E EIK LC S+EIFL+QP LLELEAP+K+CGD+HGQY DLLRLF+
Sbjct: 15 EVKNLKPGKNAQLSESEIKQLCATSKEIFLNQPNLLELEAPIKICGDVHGQYSDLLRLFD 74
Query: 372 YGGFPPEPNYLLLGDYVD 425
YGG+PP+ NYL LGDYVD
Sbjct: 75 YGGYPPQSNYLFLGDYVD 92
>08_02_0893 + 22327485-22327671,22327756-22328627
Length = 352
Score = 111 bits (266), Expect = 3e-25
Identities = 49/78 (62%), Positives = 60/78 (76%)
Frame = +3
Query: 192 EVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKMCGDIHGQYYDLLRLFE 371
+V+ VQL+E EI+ LC+ ++IFLSQP LLELEAP+ +CGDIHGQ+ DLLRLFE
Sbjct: 18 KVKPSSSAKKVQLSEAEIRQLCVTGKDIFLSQPNLLELEAPINVCGDIHGQFSDLLRLFE 77
Query: 372 YGGFPPEPNYLLLGDYVD 425
+GG PP NYL LGDYVD
Sbjct: 78 FGGLPPTANYLFLGDYVD 95
>01_03_0220 -
13905808-13905831,13906694-13906885,13906960-13907519,
13910007-13910187
Length = 318
Score = 105 bits (253), Expect = 1e-23
Identities = 45/77 (58%), Positives = 59/77 (76%)
Frame = +3
Query: 195 VRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKMCGDIHGQYYDLLRLFEY 374
V G + G VQL+E EI+ LC++++ + LSQP LL + AP+K+CGDIHGQ+ DLLRLF+
Sbjct: 17 VEGGRGGRQVQLSEAEIRQLCVEAKRVLLSQPNLLRIHAPVKICGDIHGQFVDLLRLFDL 76
Query: 375 GGFPPEPNYLLLGDYVD 425
GG+PP YL LGDYVD
Sbjct: 77 GGYPPTSTYLFLGDYVD 93
>06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143
Length = 339
Score = 102 bits (244), Expect = 1e-22
Identities = 52/95 (54%), Positives = 62/95 (65%), Gaps = 17/95 (17%)
Frame = +3
Query: 192 EVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKMC--------------- 326
+ RG + QL + EI+ LC ++++FLSQP LLELEAP+K+C
Sbjct: 15 DARGGRTARPAQLADAEIRKLCAAAKDVFLSQPNLLELEAPIKICECDCIMLTIILPTYS 74
Query: 327 --GDIHGQYYDLLRLFEYGGFPPEPNYLLLGDYVD 425
GDIHGQY DLLRLFEYGGFPPE NYL LGDYVD
Sbjct: 75 LTGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVD 109
>03_06_0366 +
33408671-33408745,33409342-33409398,33410398-33410481,
33410575-33410646,33410768-33410839,33411011-33411051,
33411517-33411583,33411673-33411864,33411947-33412036,
33412111-33412218,33412513-33412578
Length = 307
Score = 76.6 bits (180), Expect = 8e-15
Identities = 31/66 (46%), Positives = 47/66 (71%)
Frame = +3
Query: 228 LTEIEIKGLCLKSREIFLSQPILLELEAPLKMCGDIHGQYYDLLRLFEYGGFPPEPNYLL 407
L E E++ LC K++EI + + + +++P+ +CGDIHGQ++DL LF GG P+ NYL
Sbjct: 21 LPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLF 80
Query: 408 LGDYVD 425
+GDYVD
Sbjct: 81 MGDYVD 86
>03_02_0491 +
8854438-8854657,8854897-8854942,8855268-8855307,
8856025-8856090,8856237-8856318,8857036-8857595,
8857681-8857771,8858300-8858316
Length = 373
Score = 75.8 bits (178), Expect = 1e-14
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Frame = +3
Query: 183 NY*EVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKM-----CGDIHGQY 347
N+ ++ E P ++ L E++ L + + + ++ +EAPL GDIHGQY
Sbjct: 99 NHFQISQEGPVSSLLLPLTEMEELGEHTATVAIDLQLISAVEAPLAKGWGYGYGDIHGQY 158
Query: 348 YDLLRLFEYGGFPPEPNYLLLGDYVD 425
DLLRLFEYGGFPPE NYL LGDYVD
Sbjct: 159 SDLLRLFEYGGFPPEANYLFLGDYVD 184
Score = 67.7 bits (158), Expect = 4e-12
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +3
Query: 192 EVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKMCG 329
EVR +PG VQL+E EI+ LC SREIFLSQP LLELEAP+K+CG
Sbjct: 29 EVRTARPGKQVQLSESEIRQLCTVSREIFLSQPNLLELEAPIKICG 74
>06_03_0542 +
21959533-21959785,21960732-21960846,21962815-21962923,
21963027-21963104,21964200-21964391,21964995-21965168
Length = 306
Score = 74.9 bits (176), Expect = 2e-14
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +3
Query: 228 LTEIEIKGLCLKSREIFLSQPILLELEAPLKMCGDIHGQYYDLLRLFEYGGFPPEPNYLL 407
L E E++ LC +++ I + + + + P+ +CGDIHGQ+YDL+ LF GG P+ NYL
Sbjct: 20 LGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDTNYLF 79
Query: 408 LGDYVD 425
+GDYVD
Sbjct: 80 MGDYVD 85
>02_02_0075 -
6572385-6572558,6573416-6573607,6574553-6574630,
6574712-6574820,6575442-6575556,6576280-6576535
Length = 307
Score = 74.5 bits (175), Expect = 3e-14
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +3
Query: 228 LTEIEIKGLCLKSREIFLSQPILLELEAPLKMCGDIHGQYYDLLRLFEYGGFPPEPNYLL 407
L E E++ LC +++ I + + + + P+ +CGDIHGQ+YDL+ LF GG P+ NYL
Sbjct: 21 LAEGEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGEAPDTNYLF 80
Query: 408 LGDYVD 425
+GDYVD
Sbjct: 81 MGDYVD 86
>01_06_0339 +
28549449-28549529,28549768-28549914,28550027-28550094,
28550771-28550828,28551474-28551584,28551668-28551718,
28552308-28552451,28552570-28552665,28552781-28552852,
28553392-28553475
Length = 303
Score = 72.9 bits (171), Expect = 1e-13
Identities = 29/66 (43%), Positives = 46/66 (69%)
Frame = +3
Query: 228 LTEIEIKGLCLKSREIFLSQPILLELEAPLKMCGDIHGQYYDLLRLFEYGGFPPEPNYLL 407
L E E++ LC +EI + + + + +P+ +CGDIHGQ++DL++LF GG PE NY+
Sbjct: 16 LAEHELQSLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFATGGHVPETNYIF 75
Query: 408 LGDYVD 425
+GD+VD
Sbjct: 76 MGDFVD 81
>05_01_0319 +
2503963-2504176,2504316-2504376,2504691-2504769,
2504861-2504940,2505046-2505140,2505748-2505847,
2506647-2506716,2507657-2507758,2507972-2508053,
2508257-2508304,2508841-2509009,2509089-2509314,
2509961-2510131,2510200-2510438,2510600-2510684,
2510778-2510876,2510954-2511153,2511232-2511307,
2511463-2511675,2511763-2511815,2511999-2512151,
2512474-2512606
Length = 915
Score = 69.7 bits (163), Expect = 9e-13
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 6/72 (8%)
Frame = +3
Query: 228 LTEIEIKGLCLKSREIFLSQPILLELEAPLKMCGDIHGQYYDLLRLFEYGGFPPEP---- 395
L E+ LC + +IF+ +P +L+L+AP+K+ GD+HGQ+ DL+RLF+ G+P
Sbjct: 520 LDSYEVGELCYAAEQIFMQEPTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGYPSTAGDIT 579
Query: 396 --NYLLLGDYVD 425
+YL LGDYVD
Sbjct: 580 YIDYLFLGDYVD 591
>12_02_1128 -
26341118-26341204,26341302-26341441,26341567-26341663,
26341755-26341830,26341919-26342118,26342199-26342297,
26342395-26342479,26342786-26343024,26343233-26343403,
26343605-26343848,26343980-26344253,26344755-26344934,
26345342-26345423,26346209-26346278,26346802-26346901,
26347003-26347097,26347181-26347317,26347342-26347420,
26347591-26347651,26348580-26349009
Length = 981
Score = 67.7 bits (158), Expect = 4e-12
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 8/84 (9%)
Frame = +3
Query: 198 RGEKPGMNVQ--LTEIEIKGLCLKSREIFLSQPILLELEAPLKMCGDIHGQYYDLLRLFE 371
RG KP + Q L EI LC + IF S+P +L+L+AP+K+ GD+HGQ+ DL+RLF+
Sbjct: 650 RGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFD 709
Query: 372 YGGFPPEP------NYLLLGDYVD 425
G P +YL LGDYVD
Sbjct: 710 EYGAPSTAGDIAYIDYLFLGDYVD 733
>03_05_0488 -
24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 67.3 bits (157), Expect = 5e-12
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 8/84 (9%)
Frame = +3
Query: 198 RGEKPGMNVQ--LTEIEIKGLCLKSREIFLSQPILLELEAPLKMCGDIHGQYYDLLRLFE 371
RG KP + Q L EI LC + IF S+P +L+L+AP+K+ GD+HGQ+ DL+RLF+
Sbjct: 659 RGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPVKIFGDLHGQFGDLMRLFD 718
Query: 372 YGGFPPEP------NYLLLGDYVD 425
G P +YL LGDYVD
Sbjct: 719 EYGAPSTAGDIAYIDYLFLGDYVD 742
>10_07_0165 +
13740611-13740706,13741159-13741215,13741523-13741681,
13742315-13742398,13742496-13742567,13742810-13742881,
13743085-13743125,13743296-13743362,13744033-13744224,
13744314-13744403,13744742-13744849,13745089-13745154
Length = 367
Score = 62.5 bits (145), Expect = 1e-10
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +3
Query: 267 REIFLSQPILLELEAPLKMCGDIHGQYYDLLRLFEYGGFPPEPNYLLLGDYVD 425
R +LS + +++P+ +CGDIHGQ++DL+ LF GG P+ NYL +GDYVD
Sbjct: 94 RRKYLSGIGMKPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVD 146
>03_01_0473 -
3639533-3639598,3639848-3639955,3640037-3640126,
3640203-3640394,3640952-3641018,3641472-3641512,
3641762-3641779,3641984-3642055,3642154-3642237,
3642296-3642373,3642703-3642759,3643374-3643469
Length = 322
Score = 62.5 bits (145), Expect = 1e-10
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +3
Query: 297 LELEAPLKMCGDIHGQYYDLLRLFEYGGFPPEPNYLLLGDYVD 425
L +++P+ +CGDIHGQ++DL+ LF GG P+ NYL +GDYVD
Sbjct: 77 LPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVD 119
>09_02_0241 +
6179869-6180116,6180406-6180436,6182038-6182190,
6182921-6182983,6183396-6183664,6184055-6184133,
6184213-6184263
Length = 297
Score = 56.4 bits (130), Expect = 9e-09
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +3
Query: 321 MCGDIHGQYYDLLRLFEYGGFPPEPNYLLLGDYVD 425
+CGDIHGQ+YD+ LF+ GG P+ NYL LGD+VD
Sbjct: 94 ICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVD 128
Score = 32.3 bits (70), Expect = 0.17
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 228 LTEIEIKGLCLKSREIFLSQPILLELEAPL 317
LTE E+K LCLK+ EI + + + ++AP+
Sbjct: 19 LTEAEVKALCLKAMEILVEESNVQRVDAPV 48
>05_02_0083 +
6450694-6450766,6451391-6451560,6451633-6451704,
6451893-6452043,6452709-6452817,6452906-6453023,
6453214-6453361,6453520-6453768,6454209-6454334,
6454474-6454574,6454728-6454802,6455160-6455219
Length = 483
Score = 56.4 bits (130), Expect = 9e-09
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
Frame = +3
Query: 252 LCLKSREIFLSQPILLELEAP----LKMCGDIHGQYYDLLRLFEYGGFPPEPN-YLLLGD 416
+ L++ ++ S P L+++ P +CGD+HGQY+DLL +F+ G P E N YL GD
Sbjct: 197 IVLQTVQLLRSVPSLVDVNVPDGSHFTVCGDVHGQYFDLLNIFKLNGLPSEENPYLFNGD 256
Query: 417 YVD 425
+VD
Sbjct: 257 FVD 259
>08_02_1232 +
25429955-25430392,25430885-25431388,25432657-25432803,
25432999-25433106,25433242-25433331
Length = 428
Score = 36.3 bits (80), Expect = 0.010
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 327 GDIHGQYYDLLRLFEYGGFPPEPN-YLLLGDYVD 425
GD+HGQ +D++ L GFP + ++ GDYVD
Sbjct: 97 GDVHGQLHDVIFLLRDAGFPSDDRVFVFNGDYVD 130
>12_01_0671 -
5702051-5702159,5702493-5703216,5703910-5704476,
5704654-5704873,5705303-5707207
Length = 1174
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 243 FLFPSTEHSYQASHLVLLSNFFITLSHV*LICVSVCH 133
FL ST+ S + VL++ +L+H+ + C+ CH
Sbjct: 840 FLQDSTQRSNYSEQKVLVNGNLESLAHIWMRCIENCH 876
>02_02_0059 -
6432945-6433115,6433975-6434061,6434585-6434787,
6435281-6435392,6435473-6435517,6435622-6435726,
6435946-6435996,6436026-6436103,6437258-6437313,
6437784-6437853,6438288-6438392,6438525-6438637,
6439354-6439534,6439635-6440390
Length = 710
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +3
Query: 327 GDIHGQYYDLLRLFEYGG---FPPEPNY 401
G +HG+ Y F YGG +PP PNY
Sbjct: 69 GMLHGEPYPPPDRFGYGGGRGYPPPPNY 96
>08_02_1159 +
24773328-24773994,24775430-24775558,24776080-24776220,
24777393-24777487,24777545-24778606
Length = 697
Score = 27.1 bits (57), Expect = 6.3
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -1
Query: 313 GASSSSSIGC-DKNISLDFKHSPLISISVN*TFIPGFSP-RTS**FFYYVI 167
G S S IGC + +I++ H P+ SIS N PG P FF Y++
Sbjct: 83 GNGSCSGIGCCEASIAM---HIPVYSISANQVVDPGAGPDPNEPNFFVYIV 130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,576,660
Number of Sequences: 37544
Number of extensions: 220710
Number of successful extensions: 416
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -