Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3576
(714 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 89 2e-18
01_01_1152 + 9170628-9171899 75 7e-14
04_04_0619 + 26652923-26653267,26653440-26654273 73 2e-13
11_02_0011 - 7337618-7338496,7338596-7338991 73 3e-13
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 71 9e-13
11_01_0767 + 6438648-6438809,6439146-6440000 68 6e-12
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 66 3e-11
11_02_0012 - 7346282-7347136,7347234-7347593 66 3e-11
11_01_0750 - 6315126-6315896,6316371-6316784 65 5e-11
11_02_0014 - 7352619-7352918,7353173-7353418 58 7e-09
11_01_0771 + 6453130-6454488 56 4e-08
05_06_0044 - 25150322-25151260 52 3e-07
08_01_0224 + 1789447-1789633,1789959-1790261,1793380-1793542,179... 30 2.1
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 2.8
02_01_0384 - 2781362-2782299,2782320-2782428 29 3.7
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 4.8
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361... 28 6.4
01_06_0373 - 28841462-28842850 28 8.5
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 89.4 bits (212), Expect = 2e-18
Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Frame = +2
Query: 155 KSVVLSAFSVLPPLAQLALASDGETHEELLKAIG---FPDDDAIRTE-----FASKSRDL 310
K++ +S S+ LA L + GET ++++ +G P A+ + A S
Sbjct: 32 KNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGPG 91
Query: 311 RSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEE 487
G +++ AN V+V +L +A V D + ++ + + F K A + IN+W E
Sbjct: 92 DDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFES 151
Query: 488 NTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
T RIKD + D++ AT VL NA+YFKG W SKFD R TSD FY+ + P M
Sbjct: 152 ATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFM 211
>01_01_1152 + 9170628-9171899
Length = 423
Score = 74.5 bits (175), Expect = 7e-14
Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Frame = +2
Query: 149 QGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPD-DDAIRTEFASKSRDLRSIKG 325
QG++ ++S S LA +A + GET ELL +G P + R+ LR +
Sbjct: 57 QGRNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPN 116
Query: 326 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNR 502
A V+V G L FA + + + + DF+ A+ +N +V + T
Sbjct: 117 TSF--ACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGL 174
Query: 503 IKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
I+D++ P+S+ S+T VL NA++FKG WS F T F++ ++ P M
Sbjct: 175 IRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFM 229
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 72.9 bits (171), Expect = 2e-13
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Frame = +2
Query: 143 IIQGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIK 322
I + + + S + LA LA +DGET +LL +G + A ++R+
Sbjct: 16 ITEQSNFMFSPLGLRAGLALLATGTDGETLRQLLAFLGSQHIHQLNAASAGLLAEMRAWP 75
Query: 323 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNT-VAAKSINDWVEENTNN 499
+L A ++V +L F + + +++DF AA +N ++ + TN
Sbjct: 76 --QLSFAAGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNG 133
Query: 500 RIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
R+ + ++P + S+T VL NA++FK W KF+ T R F+ + VP +
Sbjct: 134 RLNNTISPGTFGSSTKCVLANAMHFKATWGRKFESYDTQRRRFHRQDGTRVTVPFL 189
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 72.5 bits (170), Expect = 3e-13
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 5/185 (2%)
Frame = +2
Query: 143 IIQGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP--DD--DAIRTEFASKSRDL 310
+ K++V S S+ LA +A + G T +ELL +G DD +++R D
Sbjct: 27 VSSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADE 86
Query: 311 RSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAA-KSINDWVEE 487
+ G + A V+ + +L + + + + + +F + + K IN WV +
Sbjct: 87 SASGGPRVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSK 146
Query: 488 NTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
TN I +++ S+ TA VLVNAIYFKG WS+ F T+ F+ ++ VP M
Sbjct: 147 ATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFM 206
Query: 668 YKRGD 682
R D
Sbjct: 207 SSRED 211
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 70.9 bits (166), Expect = 9e-13
Identities = 31/75 (41%), Positives = 46/75 (61%)
Frame = +2
Query: 443 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDR 622
K A +N WVE+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D
Sbjct: 209 KAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDG 268
Query: 623 DFYVSKDKTIKVPMM 667
+F++ K+++ P M
Sbjct: 269 EFHLLDGKSVQAPFM 283
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +2
Query: 467 INDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDK 646
+N WV+ T+ IK++ P S++ T VL NA+YFKGAW+ KFD T D +F++ +
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGE 528
Query: 647 TIKVPMMYKR 676
+++ P M R
Sbjct: 529 SVQAPFMSTR 538
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 68.1 bits (159), Expect = 6e-12
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = +2
Query: 410 FNSDVQNIDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 586
+ +DF + V A K IN WV T N I +++ P+S S T V+ NAIYFKG W
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
Query: 587 SSKFDERLTSDRDFYVSKDKTIKVPMMYK-RGDY 685
+ FD+ T++R+F +++VP M + G Y
Sbjct: 102 LAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSY 135
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 66.1 bits (154), Expect = 3e-11
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +2
Query: 458 AKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVS 637
A +N WV+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D +F +
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLL 65
Query: 638 KDKTIKVPMM 667
K++ P M
Sbjct: 66 DGKSVLAPFM 75
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 65.7 bits (153), Expect = 3e-11
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 5/181 (2%)
Frame = +2
Query: 155 KSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP--DD--DAIRTEFASKSRDLRSIK 322
++VV S S+ LA +A + G T +EL+ +G DD +++R D
Sbjct: 31 RNVVFSPVSLYAALALVASGARGTTLDELVALLGAASLDDLEESVRRAVEVGLADESESG 90
Query: 323 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAA-KSINDWVEENTNN 499
G + A V+ HD E A+ + + + DF + ++ K IN WV + TN
Sbjct: 91 GPRVSYACGVW-HD-----ERLAL--KPAYRA----ADFQRQPKSSRKKINKWVSKATNK 138
Query: 500 RIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG 679
I++++ S+ TA VLVNAIYFKG WS+ F T+ F+ ++ P M R
Sbjct: 139 LIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFMSSRE 198
Query: 680 D 682
D
Sbjct: 199 D 199
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 65.3 bits (152), Expect = 5e-11
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Frame = +2
Query: 158 SVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDD----AIRTEFASKS-----RDL 310
+ +SA +V LA A + G T ++L+A+G A AS+ RD
Sbjct: 33 NAAVSAPAVHVSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANVASRVVKRVLRDR 92
Query: 311 RSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEE 487
+ G L A V+ L F ++ +V+ S + DF +K A IN WV++
Sbjct: 93 STSGGPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKD 152
Query: 488 NTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
+T + L+ ++ T VL +A+YF+G W + D R T+++ FY +++VP +
Sbjct: 153 STKGTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVPFV 212
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 58.0 bits (134), Expect = 7e-09
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +2
Query: 461 KSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSK 640
K IN+WV + TN I +++ S+ T VLVNAIYFKG WS F T+ F+
Sbjct: 88 KKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLD 147
Query: 641 DKTIKVPMMYKRGD 682
++ V M R D
Sbjct: 148 GSSVNVRFMRSRED 161
>11_01_0771 + 6453130-6454488
Length = 452
Score = 55.6 bits (128), Expect = 4e-08
Identities = 30/86 (34%), Positives = 42/86 (48%)
Frame = +2
Query: 374 LDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGV 553
+D ++ + + V ++ K A K IN W T I D++ P S+ TA V
Sbjct: 146 IDAFILLLDPSMIDQCVLDLVSEKAEEARKQINAWARRATGKLITDVLPPRSVGPETAVV 205
Query: 554 LVNAIYFKGAWSSKFDERLTSDRDFY 631
L NAIYFKG W F+E T + FY
Sbjct: 206 LGNAIYFKGKWDRPFNESDTERKPFY 231
>05_06_0044 - 25150322-25151260
Length = 312
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Frame = +2
Query: 350 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNRIKDL---- 514
V+V +L+ FA + VF + V++ + N AA++ IN+W T +KD+
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRS---AGNPAAARAEINEWFSSQTGGFVKDILSNS 59
Query: 515 VNPDSLSSATAG-------VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 667
++ D S G L N++YF W F LT + DF+VS D ++VP M
Sbjct: 60 IDDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFM 117
>08_01_0224 +
1789447-1789633,1789959-1790261,1793380-1793542,
1793561-1793597,1794305-1794925
Length = 436
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 346 VRHFKLNAFN*SKVTAFTREFCSYSIVVREADSFQKLFMGFTIRS 212
VRH ++ +N + + FC+Y+I + D KL G I+S
Sbjct: 130 VRHREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARGPPIKS 174
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +2
Query: 263 DDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 388
+++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 594 NEESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -1
Query: 333 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAER 166
S++P R+RL S +SG P +SSS SPS A RGG ++ R
Sbjct: 211 SASPASPSRTRLAPPRSPPAGGASGAPR--RSSSAASPSCAGVEGPRGGEVDDGRR 264
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 281 TEFASKSRDLRSIKGVELKMANKVYVHDG 367
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
>09_04_0752 +
19933604-19934278,19934679-19935387,19936118-19936161,
19936607-19936704,19937056-19937160,19937694-19937757,
19938316-19938885
Length = 754
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 321 LIDRRSRLLLANSVRIASSSGK 256
LIDRR RLL NS A++SGK
Sbjct: 643 LIDRRRRLLEVNSAVAAAASGK 664
>01_06_0373 - 28841462-28842850
Length = 462
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 164 VLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD 307
+L+ F LP L A+ GE EEL+ A G P A + RD
Sbjct: 125 ILAFFLYLPVLHAQTTANFGEMGEELVHAPGIPSFPATHSVLPLMERD 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,961,113
Number of Sequences: 37544
Number of extensions: 357287
Number of successful extensions: 991
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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