Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3567
(738 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 126 3e-30
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 126 3e-30
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 126 3e-30
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 126 3e-30
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 126 3e-30
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 84 2e-17
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 46 4e-06
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 44 3e-05
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 30 0.30
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 29 0.52
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 28 1.2
SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr... 27 2.8
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 27 2.8
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 27 3.7
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 26 6.4
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 25 8.5
SPCC1442.07c |||ubiquitin/metalloprotease fusion protein|Schizos... 25 8.5
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 8.5
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 126 bits (304), Expect = 3e-30
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -2
Query: 470 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 291
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 290 IQKESTLHMVLRLRGG 243
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 126 bits (304), Expect = 3e-30
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -2
Query: 470 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 291
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 290 IQKESTLHMVLRLRGG 243
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 126 bits (304), Expect = 3e-30
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -2
Query: 470 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 291
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 290 IQKESTLHMVLRLRGG 243
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 126 bits (304), Expect = 3e-30
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -2
Query: 470 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 291
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 290 IQKESTLHMVLRLRGG 243
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 126 bits (304), Expect = 3e-30
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -2
Query: 470 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 291
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 290 IQKESTLHMVLRLRGG 243
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 126 bits (304), Expect = 3e-30
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -2
Query: 470 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 291
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 290 IQKESTLHMVLRLRGG 243
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 126 bits (304), Expect = 3e-30
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -2
Query: 470 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 291
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 290 IQKESTLHMVLRLRGG 243
IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 126 bits (304), Expect = 3e-30
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -2
Query: 470 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 291
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 290 IQKESTLHMVLRLRGG 243
IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 126 bits (304), Expect = 3e-30
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = -2
Query: 470 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 291
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 290 IQKESTLHMVLRLRGG 243
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 84.2 bits (199), Expect = 2e-17
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = -2
Query: 470 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 291
M I +KTLTGK I + +P + V+ +K+++ +KEG+P QQRLI+AGKQ+ D K Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 290 IQKESTLHMVLRLRGG 243
++ S LH+VL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 46.4 bits (105), Expect = 4e-06
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = -2
Query: 470 MQIFIKTLTGKTITAETEPAET-VADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 294
M + K L + A+T +++LK+KI ++ V++Q+LI++G+ L D KT+ +Y
Sbjct: 1 MNLTFKNLQQQKFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEY 60
Query: 293 NIQKE 279
NI+++
Sbjct: 61 NIKEQ 65
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 43.6 bits (98), Expect = 3e-05
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = -2
Query: 470 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 291
+ + IK + + +V LK+ IA + ++QRLI+AG+ L+D +++ Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 290 IQKESTLHMVLRL 252
IQ ++H+V L
Sbjct: 64 IQDGHSIHLVKTL 76
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 30.3 bits (65), Expect = 0.30
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 469 IFTLSLINDNGCCECALASTAGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 639
+F L LI D+G + L +++ A DT+T +Y + +DF R +L G+ +
Sbjct: 8 LFKLLLIGDSGVGKSCL------LLRFADDTYTESYISTIGVDFKIRTFELEGKTVK 58
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 29.5 bits (63), Expect = 0.52
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -2
Query: 467 QIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMAD--Y 294
+I + T+ K + +TV +LK+ IA P D+ +LI AG+ L + + + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 293 NIQKESTLHMVL 258
+ T H+V+
Sbjct: 65 DATDLVTFHLVI 76
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 23 EYVPTSISGSKKRKNSVPAKQRSSIKNRRNTT 118
EY+P SI G+K K + K+ IKN + T
Sbjct: 472 EYLPDSIKGTKFYKLPIELKEDEEIKNLKTDT 503
>SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 178
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 26 YVPTS--ISGSKKRKNSVPAKQRSSIKNRRNTTAAPTLLMVSDNTQD 160
Y PT + +K N+V +K+ S + +NT A PT + +N +D
Sbjct: 60 YRPTKKELKKAKMNGNAVNSKELSPNTDNQNTPAGPTKHSLDENEKD 106
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = -2
Query: 410 ETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLR 255
E ++D +IAD D++++I+A + + + +AD+N H +L+
Sbjct: 534 ELLSDHNFEIADLRDELQDKEQIIYALRYAQKQRDIADFNQSLAKFPHKILK 585
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 26.6 bits (56), Expect = 3.7
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +2
Query: 20 TEYVPTSISGSKKRKNSVPAKQRSSIKNRRNTT------AAPTLLMVSDNTQDTNMSE*I 181
T VP++ SG KK ++S A + KN+ N A P LL+ +N ++ SE +
Sbjct: 646 TPAVPSAKSGLKKDQSSEVANKDVVSKNKDNIAILADREARPQLLLDDNNDSSSSSSEHL 705
Query: 182 KNF 190
+F
Sbjct: 706 ISF 708
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.8 bits (54), Expect = 6.4
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 333 RKDKSLLIYGHTFFIGNFLLEIGHRLCGFRFGGNGFARQCFD 458
RK+ +YGH F F + LCG F N QC D
Sbjct: 396 RKESVHEVYGHKFLQHQFYQIMRCALCG-EFLKNAAGMQCID 436
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 25.4 bits (53), Expect = 8.5
Identities = 24/95 (25%), Positives = 46/95 (48%)
Frame = -2
Query: 542 TIPPAVEARAHSQQPLSFISDSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV 363
T+ ++ + S+ L+ I ++ +I K+L + +TE A+ +A + +KI E
Sbjct: 403 TLNRNIKVTSQSKDSLTSIVGDLESKI--KSLHESVSSLDTERADLLAKINEKIESLELE 460
Query: 362 PVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVL 258
DQQ+ +L KT + N + +S L +L
Sbjct: 461 KHDQQKKRLTYSEL-FHKTQ-ELNEELQSCLQKIL 493
>SPCC1442.07c |||ubiquitin/metalloprotease fusion
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 282
Score = 25.4 bits (53), Expect = 8.5
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -2
Query: 443 GKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHM 264
G I +TV D K+K+ + V +L++ G L D + D ++ ES +
Sbjct: 9 GNVIALSFNENDTVLDAKEKLGQEIDVSPSLIKLLYKG-NLSDDSHLQDV-VKNESKIMC 66
Query: 263 VLR 255
++R
Sbjct: 67 LIR 69
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 474 KNANIHQNIDGQNHYRRNGTRRDGGRSQAKN 382
K+ N Q+I G+++ R+N GRS N
Sbjct: 1518 KDKNKRQDISGESNSRQNNAISRAGRSNGSN 1548
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,107,899
Number of Sequences: 5004
Number of extensions: 63950
Number of successful extensions: 185
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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