Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3561
         (372 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358275-1|AAQ88642.1|  453|Homo sapiens NL2 protein.                  30   2.1  
U77456-1|AAC50870.1|  375|Homo sapiens nucleosome assembly prote...    29   6.3  
BC022090-1|AAH22090.1|  375|Homo sapiens nucleosome assembly pro...    29   6.3  

>AY358275-1|AAQ88642.1|  453|Homo sapiens NL2 protein.
          Length = 453

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +1

Query: 109 KLFPTPSAIPQLWEK-LHENMSNTWNEFVSEYDPVESPRALKSMPGAFHVAGLLLISSVS 285
           + FP  SA  ++    L  +   TWN  V E   + +PR  K M GA      L++ + +
Sbjct: 5   RFFPAASATKRVLPPVLRVSSPRTWNPNVPESPRIPAPRLPKRMSGAPTAGAALMLCAAT 64

Query: 286 AL 291
           A+
Sbjct: 65  AV 66


>U77456-1|AAC50870.1|  375|Homo sapiens nucleosome assembly protein
           2 protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 88  TQQSPLTKLFPTPSAIPQLWEKLHENMSNTWNEFVSEYD 204
           T+++  T   P P  IP+ W  +  N+ +  +E V EYD
Sbjct: 144 TEKAAATAEEPDPKGIPEFWFTIFRNV-DMLSELVQEYD 181


>BC022090-1|AAH22090.1|  375|Homo sapiens nucleosome assembly
           protein 1-like 4 protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 88  TQQSPLTKLFPTPSAIPQLWEKLHENMSNTWNEFVSEYD 204
           T+++  T   P P  IP+ W  +  N+ +  +E V EYD
Sbjct: 144 TEKAAATAEEPDPKGIPEFWFTIFRNV-DMLSELVQEYD 181


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.314    0.128    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,488,700
Number of Sequences: 237096
Number of extensions: 1048206
Number of successful extensions: 1896
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1896
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)