Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3561
(372 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021175-3|CAA15963.2| 467|Caenorhabditis elegans Hypothetical ... 28 1.9
Z70269-2|CAA94224.1| 143|Caenorhabditis elegans Hypothetical pr... 27 3.2
AF003141-7|AAK21481.1| 411|Caenorhabditis elegans Hypothetical ... 27 5.7
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 26 9.9
U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant respons... 26 9.9
U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant respons... 26 9.9
U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant respons... 26 9.9
AL032627-16|CAD56606.1| 301|Caenorhabditis elegans Hypothetical... 26 9.9
AL032627-15|CAB63358.1| 278|Caenorhabditis elegans Hypothetical... 26 9.9
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 26 9.9
AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant respo... 26 9.9
>AL021175-3|CAA15963.2| 467|Caenorhabditis elegans Hypothetical
protein Y6E2A.4 protein.
Length = 467
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 67 DRMAQEYTQQSPL-TKLFPTPSAIPQLWEKLHENMSNTWNEFVSEYD 204
++ +T ++P+ +K+ TP + K HE+M N+ N+ + + D
Sbjct: 214 EKNGTNHTTKNPIPSKIIVTPQENDEAITKFHESMKNSENKIIRKID 260
>Z70269-2|CAA94224.1| 143|Caenorhabditis elegans Hypothetical
protein ZK1086.2 protein.
Length = 143
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 118 PTPSAIPQLWEKLHENMSNTWN--EFVSEY 201
PTP IP +WE+ E + N E+VS Y
Sbjct: 7 PTPCQIPPIWERNAEMFEDARNFIEYVSTY 36
>AF003141-7|AAK21481.1| 411|Caenorhabditis elegans Hypothetical
protein W02D3.2 protein.
Length = 411
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -3
Query: 232 FSKHEGFRRGRIQKRIRSMYSTYFHEAFPTI-EVWQKALEIISLKGF 95
FS + + + R + +YS + +E FP I ++ ++ +E++ GF
Sbjct: 349 FSGADAYEKIRAGASLVQLYSAFVYEGFPVIGKIKRELVELLRKDGF 395
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 26.2 bits (55), Expect = 7.5
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -2
Query: 314 FDFXLSSLKA--LTLDINSRPATWNAPGMLFKARGLSTGSYSETNSFHVFDIFS*SF 150
F F LS+ K + DIN RP T + + + G+S S + + VF + F
Sbjct: 8 FKFPLSTFKIDLINFDINGRPTTTDTFSKMAPSDGMSFDSAHQKRTEGVFQSLAKGF 64
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 25.8 bits (54), Expect = 9.9
Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Frame = +1
Query: 10 GAKSINIGDLLLVE-QLKQTDRMAQEYTQQSPLTKLFPTPSAIPQLWEKLHENMSNTWNE 186
G +++GD+L + ++ D M + +++ PT L+E+LH ++ W
Sbjct: 539 GFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDPIPTKMCRTVLYEELHSRGTSNWGY 598
Query: 187 FVSEYDPVESPRALKSMPGAFHVAGLLLISSVS---ALRELNXKSNGQKQS 330
+ Y +SP L + + L ++ + L +N ++ K+S
Sbjct: 599 VIEGYP--KSPDQLVDLEHSLQRTDLAILIDCTEQFCLEVINKRNRENKRS 647
>U49954-5|AAA93427.2| 445|Caenorhabditis elegans Odorant response
abnormal protein4, isoform a protein.
Length = 445
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 154 LHENMSNTWNEFVSEYDPVESPRALKSMPGAFHVAGLLLIS 276
L EN + + E+ + R L+ +PG HV G+ S
Sbjct: 60 LEENATESSKMLEDEWMSDHAERLLRMLPGGIHVVGIAWFS 100
>U49954-4|AAN84809.1| 473|Caenorhabditis elegans Odorant response
abnormal protein4, isoform c protein.
Length = 473
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 154 LHENMSNTWNEFVSEYDPVESPRALKSMPGAFHVAGLLLIS 276
L EN + + E+ + R L+ +PG HV G+ S
Sbjct: 90 LEENATESSKMLEDEWMSDHAERLLRMLPGGIHVVGIAWFS 130
>U49954-3|AAN84808.1| 475|Caenorhabditis elegans Odorant response
abnormal protein4, isoform b protein.
Length = 475
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 154 LHENMSNTWNEFVSEYDPVESPRALKSMPGAFHVAGLLLIS 276
L EN + + E+ + R L+ +PG HV G+ S
Sbjct: 92 LEENATESSKMLEDEWMSDHAERLLRMLPGGIHVVGIAWFS 132
>AL032627-16|CAD56606.1| 301|Caenorhabditis elegans Hypothetical
protein Y41C4A.12b protein.
Length = 301
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/68 (20%), Positives = 28/68 (41%)
Frame = +1
Query: 43 LVEQLKQTDRMAQEYTQQSPLTKLFPTPSAIPQLWEKLHENMSNTWNEFVSEYDPVESPR 222
+V++L + + +PL P ++ + M+N + E V YD R
Sbjct: 34 IVQKLSTIRKEVERSAAPTPLLLTPPGSCGSGSIYSDISSEMTNVYTEAVEAYDQQIYSR 93
Query: 223 ALKSMPGA 246
++ + GA
Sbjct: 94 CVRLVEGA 101
>AL032627-15|CAB63358.1| 278|Caenorhabditis elegans Hypothetical
protein Y41C4A.12a protein.
Length = 278
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/68 (20%), Positives = 28/68 (41%)
Frame = +1
Query: 43 LVEQLKQTDRMAQEYTQQSPLTKLFPTPSAIPQLWEKLHENMSNTWNEFVSEYDPVESPR 222
+V++L + + +PL P ++ + M+N + E V YD R
Sbjct: 34 IVQKLSTIRKEVERSAAPTPLLLTPPGSCGSGSIYSDISSEMTNVYTEAVEAYDQQIYSR 93
Query: 223 ALKSMPGA 246
++ + GA
Sbjct: 94 CVRLVEGA 101
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 25.8 bits (54), Expect = 9.9
Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Frame = +1
Query: 10 GAKSINIGDLLLVE-QLKQTDRMAQEYTQQSPLTKLFPTPSAIPQLWEKLHENMSNTWNE 186
G +++GD+L + ++ D M + +++ PT L+E+LH ++ W
Sbjct: 539 GFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDPIPTKMCRTVLYEELHSRGTSNWGY 598
Query: 187 FVSEYDPVESPRALKSMPGAFHVAGLLLISSVS---ALRELNXKSNGQKQS 330
+ Y +SP L + + L ++ + L +N ++ K+S
Sbjct: 599 VIEGYP--KSPDQLVDLEHSLQRTDLAILIDCTEQFCLEVINKRNRENKRS 647
>AF055911-1|AAC39022.1| 445|Caenorhabditis elegans odorant response
protein ODR-4 protein.
Length = 445
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 154 LHENMSNTWNEFVSEYDPVESPRALKSMPGAFHVAGLLLIS 276
L EN + + E+ + R L+ +PG HV G+ S
Sbjct: 60 LEENATESSKMLEDEWMSDHAERLLRMLPGGIHVVGIAWFS 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.128 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,603,522
Number of Sequences: 27780
Number of extensions: 170328
Number of successful extensions: 415
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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