Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3554
(545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 52 2e-07
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 40 0.002
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 40 0.002
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 36 0.014
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 36 0.025
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 35 0.044
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 35 0.044
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 32 0.31
U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical pr... 31 0.54
U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical pr... 31 0.54
AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein. 31 0.54
Z99283-5|CAE46680.1| 308|Caenorhabditis elegans Hypothetical pr... 30 0.95
Z99283-4|CAB16534.1| 342|Caenorhabditis elegans Hypothetical pr... 30 0.95
Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 29 1.7
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 29 1.7
U00051-12|AAU05571.1| 659|Caenorhabditis elegans Hypothetical p... 29 2.9
U00051-11|AAM29695.1| 683|Caenorhabditis elegans Hypothetical p... 29 2.9
U00051-10|AAM29694.1| 657|Caenorhabditis elegans Hypothetical p... 29 2.9
Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 28 5.0
U42839-3|AAC69014.1| 152|Caenorhabditis elegans Hypothetical pr... 28 5.0
U41992-3|AAL02507.1| 134|Caenorhabditis elegans Hypothetical pr... 28 5.0
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 5.0
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 27 8.8
L17337-3|AAA28222.1| 331|Caenorhabditis elegans Hypothetical pr... 27 8.8
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 27 8.8
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 27 8.8
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 52.4 bits (120), Expect = 2e-07
Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 2/132 (1%)
Frame = +1
Query: 106 QESFKCPDDFGFYPHHISCDKYWKCDNG-VAELKTCGNGLAFDATDSKYLTENCDYLHNV 282
Q +F + G Y + C +C G + E +C + LAF+ LT CDY V
Sbjct: 1178 QSAFCDGKEDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFNQ-----LTGKCDYPQKV 1232
Query: 283 E-CGERTQLEPPISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 459
C Q + CS D N C+VF+ C G C G ++ VC
Sbjct: 1233 SGCENHGQ-----TNGECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVC 1287
Query: 460 MWADQVPECKNE 495
W VP C +
Sbjct: 1288 DWPSAVPSCSGQ 1299
Score = 45.2 bits (102), Expect = 3e-05
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 28/147 (19%)
Frame = +1
Query: 166 KYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-ECGER-TQLEPPISTP---H 330
KY +C NG A ++ CG L F+ T+ C Y V ECG + + P I+TP
Sbjct: 707 KYIQCSNGAAIVRRCGESLYFNEA-----TQECTYRDEVPECGSQGSTSSPVITTPGQDQ 761
Query: 331 CSRLYGIFPDE----------NKC-------------DVFWNCWNGEASRYQCSPGLAYD 441
S YGI D+ ++C + C + AS +C L +D
Sbjct: 762 SSNYYGIPSDDVPSTTQTPVGDRCAYVASGLFDLGCSQKYIQCSDSAASVRECEGSLYFD 821
Query: 442 RESRVCMWADQVPECKNEEVAKXIXLP 522
S+ C + D+V +C+ +V+ +P
Sbjct: 822 ERSQSCRFRDEVFKCQTADVSSSSTVP 848
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 42.3 bits (95), Expect = 2e-04
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = +1
Query: 169 YWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-ECGERTQLEPPISTPHCSRLY 345
++ C G+A + C L F+ S +CD+ NV +C E++ E P +C +
Sbjct: 194 FFSCSEGIAHRRNCPANLVFNPAIS-----SCDWPKNVMDCSEKS--EKP---QNCGEVD 243
Query: 346 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNE 495
G F F C NG C GL + ++++C + V EC E
Sbjct: 244 GYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDLE 293
Score = 38.3 bits (85), Expect = 0.004
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 7/133 (5%)
Frame = +1
Query: 121 CPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-EC--- 288
C + G++ + C NG+ + C +GL F + + CDY NV EC
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKN-----QMCDYEWNVDECDLE 293
Query: 289 --GERTQLEPPISTPHCSRL-YGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 459
G + + C+ + G++ + V +C NG + ++C P L ++ S +C
Sbjct: 294 SSGFMENYKASEALTPCTNMDNGLYALDCTPRVL-SCQNGRENIFECPPSLVFNENSLIC 352
Query: 460 MWADQVPECKNEE 498
+ + +C E+
Sbjct: 353 DYPETSLKCCMED 365
Score = 31.1 bits (67), Expect = 0.54
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 379 FWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNE 495
F C +GEA C L Y + C W V EC E
Sbjct: 42 FLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEE 80
Score = 30.7 bits (66), Expect = 0.72
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 1/123 (0%)
Frame = +1
Query: 121 CPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERT 300
CP+D ++ + CD W+ + V E G F S + + + GE +
Sbjct: 55 CPEDLVYHKNLEFCD--WR--HNVFECGEEGEENEFSGDGSGESSGDEEITFGDSSGESS 110
Query: 301 QLEPPISTPHCSRLY-GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQV 477
E + C L G++ + C +G CS L YD ++ C W +
Sbjct: 111 GDE--LLENVCESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMI 168
Query: 478 PEC 486
EC
Sbjct: 169 DEC 171
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Frame = +1
Query: 136 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-ECGERTQLEP 312
G +P+ + + C G+A + C L F+ T L CD+ +V EC
Sbjct: 253 GIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPT---ILV--CDWPRDVAECAGL----- 302
Query: 313 PISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECK 489
P P C G F F C NG A C GL + + C + V EC+
Sbjct: 303 PTPQPTCEE-DGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQ 360
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 379 FWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNE 495
++ C A C L YD +S+ C+W V ECK +
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKED 193
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +1
Query: 325 PHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPEC 486
P C + GI P+ F C G A C L ++ VC W V EC
Sbjct: 245 PTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Frame = +1
Query: 136 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-ECGERTQLEP 312
G +P+ + + C G+A + C L F+ T L CD+ +V EC
Sbjct: 253 GIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPT---ILV--CDWPRDVAECAGL----- 302
Query: 313 PISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECK 489
P P C G F F C NG A C GL + + C + V EC+
Sbjct: 303 PTPQPTCEE-DGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQ 360
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 379 FWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNE 495
++ C A C L YD +S+ C+W V ECK +
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKED 193
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +1
Query: 325 PHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPEC 486
P C + GI P+ F C G A C L ++ VC W V EC
Sbjct: 245 PTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 36.3 bits (80), Expect = 0.014
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Frame = +1
Query: 121 CPDDFGFYPHHISCD-KYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGER 297
CPD G Y + C KY +C N V ++C GL FD ++ E H G+R
Sbjct: 43 CPDGDGLYA--VGCSSKYLQCVNNVEYEQSCPEGLYFDRLLAR--CERRSSNHLCATGDR 98
Query: 298 TQL---EPPISTPHCSRLYGIFP-DENKC-DVFWNCWNGEASRYQC 420
L + +S RL G + D+ C + ++ C NG + +C
Sbjct: 99 VTLNVRQKAVSINCVGRLSGDYALDKTVCNENYYQCANGISYMRKC 144
Score = 36.3 bits (80), Expect = 0.014
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 352 FPDENKCD-VFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPEC 486
F D KC FW C NG+ R C L Y + +C + + V +C
Sbjct: 211 FTDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDC 256
Score = 30.3 bits (65), Expect = 0.95
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 388 CWNGEASRYQCSPGLAYDRESRVCMWADQVPECK 489
C G + C+PGL Y+ ++ +C + V CK
Sbjct: 909 CMQGRSLISSCAPGLFYNEKNGMCAYKHTVDTCK 942
Score = 30.3 bits (65), Expect = 0.95
Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 5/127 (3%)
Frame = +1
Query: 136 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDY-LHNVECGERTQLE- 309
G+Y S Y+ C + +C N L F +E C + + EC T L+
Sbjct: 961 GYYSAGCS-SYYFSCIDEQIRKMSCPNSLKFSKE-----SEKCVFPIDAKECSIATTLDR 1014
Query: 310 --PPISTPHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVP 480
P + + C+ R G+ + + C NG A C L Y+ +++ C +
Sbjct: 1015 TPPAVPSDFCTIRSNGLHHLKMCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNK 1074
Query: 481 ECKNEEV 501
+C N+ +
Sbjct: 1075 DCGNDYI 1081
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +1
Query: 142 YPHHISCDKY-WKCDNGVAELKTCGNGLAFDATDSKYLTEN-CDYLHNV-ECGERTQLEP 312
+ ++ C Y W+C NG KTC L + L +N CD+ +V +C E E
Sbjct: 211 FTDNVKCSPYFWQCSNGKLFRKTCPEKLIY------VLDQNLCDFPESVKDCPEYNGSET 264
Query: 313 PISTP 327
P
Sbjct: 265 SYRAP 269
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 133 FGFYPHHISCDKYWKCDNGVAELKTCGNGLAFD 231
FG H S + CDNGV + C + L FD
Sbjct: 360 FGIKECHAS---FLSCDNGVGRVIQCADNLVFD 389
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 35.5 bits (78), Expect = 0.025
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 15/123 (12%)
Frame = +1
Query: 136 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTEN----CDYLHNVECGERTQ 303
GFYP+ +C + C + + +C +GL + A+ KY T + C T+
Sbjct: 487 GFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSAS-LKYCTTSTASGCSVTTTRAPTTTTK 545
Query: 304 LEPPISTP-----------HCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRES 450
P ++T C++ G F + C F C NG + ++C GL++ ++
Sbjct: 546 SAPTVTTTTRAPTTTTPAFKCTK-DGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADT 604
Query: 451 RVC 459
+C
Sbjct: 605 MMC 607
Score = 35.5 bits (78), Expect = 0.025
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 112 SFKCPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDA 234
+FKC D GF+ C K+ +C NG++ C NGL+F A
Sbjct: 563 AFKCTKD-GFFGVPSDCLKFIRCVNGISYNFECPNGLSFHA 602
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +2
Query: 287 AERGHSLSPQSPL---LTVRDCTASSLMKTSATFSG--TAGTEKPPAISAAPDLPTTESP 451
+ + +S+S S L +++ CT S+ S T + T T+ P ++ PTT +P
Sbjct: 503 SSKSYSMSCPSGLQYSASLKYCTTSTASGCSVTTTRAPTTTTKSAPTVTTTTRAPTTTTP 562
Query: 452 ASAC 463
A C
Sbjct: 563 AFKC 566
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.044
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 385 NCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEV 501
NC NG+ + + C GL + E C ADQ+ EC V
Sbjct: 543 NCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQTTV 581
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 373 DVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKN 492
D + C NG QC LA+D +C + VPEC N
Sbjct: 229 DHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPECTN 268
Score = 30.3 bits (65), Expect = 0.95
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 136 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-EC 288
GFY D Y C NG C LAFD +++ + CDY+ NV EC
Sbjct: 220 GFYSFGECSDHYTACSNGYLIPMQCPARLAFD--EARVI---CDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.044
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 385 NCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEV 501
NC NG+ + + C GL + E C ADQ+ EC V
Sbjct: 543 NCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQTTV 581
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 373 DVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKN 492
D + C NG QC LA+D +C + VPEC N
Sbjct: 229 DHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPECTN 268
Score = 30.3 bits (65), Expect = 0.95
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 136 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-EC 288
GFY D Y C NG C LAFD +++ + CDY+ NV EC
Sbjct: 220 GFYSFGECSDHYTACSNGYLIPMQCPARLAFD--EARVI---CDYVMNVPEC 266
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 31.9 bits (69), Expect = 0.31
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 385 NCWNGEASRYQCSPGLAYDRESRVCMW 465
N + G R C+PG +D +S+VC+W
Sbjct: 299 NLFCGRWQRMPCAPGTVFDVQSQVCVW 325
>U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical
protein W01C8.5b protein.
Length = 323
Score = 31.1 bits (67), Expect = 0.54
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +1
Query: 247 YLTENCDYLHNVECGERTQLEPPISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQC-S 423
YL N Y NVE G R ++ P + P LY I DEN F EA R S
Sbjct: 149 YLMRNVTYNFNVE-GGREKMIPELYNP----LY-IGDDEN--GGFSELSQNEAERVTIHS 200
Query: 424 PGLAYDRESRVCMWADQVPECKNE 495
PGL +C+W + NE
Sbjct: 201 PGLIESNTGPLCIWMHNKDKAANE 224
>U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical
protein W01C8.5a protein.
Length = 511
Score = 31.1 bits (67), Expect = 0.54
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +1
Query: 247 YLTENCDYLHNVECGERTQLEPPISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQC-S 423
YL N Y NVE G R ++ P + P LY I DEN F EA R S
Sbjct: 337 YLMRNVTYNFNVE-GGREKMIPELYNP----LY-IGDDEN--GGFSELSQNEAERVTIHS 388
Query: 424 PGLAYDRESRVCMWADQVPECKNE 495
PGL +C+W + NE
Sbjct: 389 PGLIESNTGPLCIWMHNKDKAANE 412
>AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein.
Length = 511
Score = 31.1 bits (67), Expect = 0.54
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +1
Query: 247 YLTENCDYLHNVECGERTQLEPPISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQC-S 423
YL N Y NVE G R ++ P + P LY I DEN F EA R S
Sbjct: 337 YLMRNVTYNFNVE-GGREKMIPELYNP----LY-IGDDEN--GGFSELSQNEAERVTIHS 388
Query: 424 PGLAYDRESRVCMWADQVPECKNE 495
PGL +C+W + NE
Sbjct: 389 PGLIESNTGPLCIWMHNKDKAANE 412
>Z99283-5|CAE46680.1| 308|Caenorhabditis elegans Hypothetical
protein Y70C5C.6b protein.
Length = 308
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 106 GPQLRRGRPLTLINTSNTYCELSPWHE 26
GP P+T T N YC LS WHE
Sbjct: 51 GPCSSLDTPITSRQTPNLYCVLSNWHE 77
>Z99283-4|CAB16534.1| 342|Caenorhabditis elegans Hypothetical
protein Y70C5C.6a protein.
Length = 342
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 106 GPQLRRGRPLTLINTSNTYCELSPWHE 26
GP P+T T N YC LS WHE
Sbjct: 85 GPCSSLDTPITSRQTPNLYCVLSNWHE 111
>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
protein B0365.1 protein.
Length = 1099
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 305 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESP 451
L P + T T L+ TAGTE+PPA S AP+ T E P
Sbjct: 433 LKPMPTVPTAPQTTGQFLLSPERN---TAGTERPPA-SPAPNTSTIEHP 477
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 331 CSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 459
C + D + CD +C GEA Y C+ Y + R C
Sbjct: 1236 CVSMSSCLDDRSLCDENADCVPGEAGHYVCNCHYGYHGDGRSC 1278
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = -3
Query: 462 HADAGLSVVGKSGAALIAGGFSVPAVPENVALVFIREDAVQSRTVRSGDWGLKLCPLSAL 283
H AG S + S LIA G +P N + + A Q R SGD L + LS
Sbjct: 66 HGSAGPSPISHSQPCLIASGSRSSDIPPNESK--MSTSAYQRRASASGDQALDVPTLSQT 123
Query: 282 N 280
N
Sbjct: 124 N 124
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 151 HISCDKYWKCDNGVAELKTCGNGLAFDAT 237
H +K+WKC+ G + TC +DAT
Sbjct: 29 HFDSNKFWKCEGGRWIVVTCQINYFYDAT 57
Score = 29.1 bits (62), Expect = 2.2
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +1
Query: 136 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFD 231
G+ P +C +++C +G+ ++CG G +D
Sbjct: 164 GYKPDVYNCKNFYQCASGLWTQRSCGEGTIWD 195
>U00051-12|AAU05571.1| 659|Caenorhabditis elegans Hypothetical
protein F42G9.6c protein.
Length = 659
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 407 PAISAAPDLPTTESPASACGLIKFRSAKTKK*PNXXCCPXPP 532
P ISA+PD PTT SA L+ R++ P P PP
Sbjct: 539 PRISASPDSPTTPDIESA--LLTRRNSYGASDPTSEASPTPP 578
>U00051-11|AAM29695.1| 683|Caenorhabditis elegans Hypothetical
protein F42G9.6b protein.
Length = 683
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 407 PAISAAPDLPTTESPASACGLIKFRSAKTKK*PNXXCCPXPP 532
P ISA+PD PTT SA L+ R++ P P PP
Sbjct: 563 PRISASPDSPTTPDIESA--LLTRRNSYGASDPTSEASPTPP 602
>U00051-10|AAM29694.1| 657|Caenorhabditis elegans Hypothetical
protein F42G9.6a protein.
Length = 657
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 407 PAISAAPDLPTTESPASACGLIKFRSAKTKK*PNXXCCPXPP 532
P ISA+PD PTT SA L+ R++ P P PP
Sbjct: 537 PRISASPDSPTTPDIESA--LLTRRNSYGASDPTSEASPTPP 576
>Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical
protein B0393.5 protein.
Length = 1106
Score = 28.3 bits (60), Expect = 3.8
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = +1
Query: 160 CDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHCSR 339
CD+ KC NGV TC G D Y + C+ + C + + I + C+
Sbjct: 376 CDQNAKCSNGVC---TCSEGFTGDGFRC-YDVDECE-IPGAVCRDHSICSNTIGSFECTC 430
Query: 340 LYGIFPDENKCDVFWNC 390
G ++ KC+ C
Sbjct: 431 HGGYRFEDGKCEDVDEC 447
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 367 KCDVFWNCWNGEASRYQCSPGLAYDRESRVC 459
+CDV C+NG Y C G +++ R+C
Sbjct: 1593 QCDVSKFCFNGTNDNYICQNGGRCNKDLRLC 1623
>U42839-3|AAC69014.1| 152|Caenorhabditis elegans Hypothetical
protein F11C7.2 protein.
Length = 152
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +1
Query: 382 WNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVAKXI 513
W W A PG Y SRVC+ + C + + K I
Sbjct: 20 WTDWGAWADTCVNCPGATYRGRSRVCIPGADMSGCTGDRLEKEI 63
>U41992-3|AAL02507.1| 134|Caenorhabditis elegans Hypothetical
protein F32E10.8 protein.
Length = 134
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 115 FKCPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKY 249
F+C D + CDKY C +G E + C L T Y
Sbjct: 90 FRCTDSSSCIAPNRVCDKYKDCRDGSDERENCNQPLGTPNTTVIY 134
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
Frame = +1
Query: 190 VAELKTCGNGLAFDATDSKYLTEN-----CDYLHNVE--CGERTQLEP 312
+ E +TCG+ ++F A KYL++ D + +++ C E ++++P
Sbjct: 69 IIECRTCGHSISFHAEPLKYLSQEDLDTYTDQISDLQTCCSELSEIDP 116
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 311 PQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTES 448
PQ P+L R TAS++ T+ + + G P S P +P S
Sbjct: 218 PQPPVLPQRSKTASAVATTTTNPTTSNGAPPPVPGSKGPPVPPKPS 263
>L17337-3|AAA28222.1| 331|Caenorhabditis elegans Hypothetical
protein ZK686.3 protein.
Length = 331
Score = 27.1 bits (57), Expect = 8.8
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -3
Query: 474 LISPHADAGLSVVGKSGAALIAGGFSVPAVPENVALVFI--REDAVQSRTVRSGDWGLKL 301
+ +P+ + G + LIA + V + +A+ FI E A QS + + G KL
Sbjct: 226 ITNPNTKEPSFIHGSTQFQLIAETYIVGLLYALIAIGFICVNEAADQSNSKDRKNAGKKL 285
Query: 300 CPLSALNV-VKVVAVLGQV 247
PLS LN+ +A+ G V
Sbjct: 286 NPLSLLNIPTNTLAIAGLV 304
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 311 PQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTES 448
PQ P+L R TAS++ T+ + + G P S P +P S
Sbjct: 218 PQPPVLPQRSKTASAVATTTTNPTTSNGAPPPVPGSKGPPVPPKPS 263
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 311 PQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTES 448
PQ P+L R TAS++ T+ + + G P S P +P S
Sbjct: 218 PQPPVLPQRSKTASAVATTTTNPTTSNGAPPPVPGSKGPPVPPKPS 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,619,969
Number of Sequences: 27780
Number of extensions: 263787
Number of successful extensions: 1047
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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