Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3553
         (519 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122262-1|AAM52774.1| 1544|Drosophila melanogaster SD13096p pro...    28   6.6  
AE014134-2941|AAF53675.2| 1365|Drosophila melanogaster CG10231-P...    28   6.6  
AF004674-1|AAB61467.1|  714|Drosophila melanogaster GPRK2 protein.     28   8.7  
AE014297-4747|AAF57152.1|  714|Drosophila melanogaster CG17998-P...    28   8.7  

>AY122262-1|AAM52774.1| 1544|Drosophila melanogaster SD13096p protein.
          Length = 1544

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 322  AQELATDNRNSISTMSELLAYSIISNTQSHYSSNLFLHNH 441
            AQEL  D++    T + L   + + N  SH+ ++   HNH
Sbjct: 1392 AQELDLDSKTRNGTHAALCKSTPVINNHSHHHNHSHSHNH 1431


>AE014134-2941|AAF53675.2| 1365|Drosophila melanogaster CG10231-PA
            protein.
          Length = 1365

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 322  AQELATDNRNSISTMSELLAYSIISNTQSHYSSNLFLHNH 441
            AQEL  D++    T + L   + + N  SH+ ++   HNH
Sbjct: 1215 AQELDLDSKTRNGTHAALCKSTPVINNHSHHHNHSHSHNH 1254


>AF004674-1|AAB61467.1|  714|Drosophila melanogaster GPRK2 protein.
          Length = 714

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +1

Query: 187 RCLSVTTGFPDSDLILPLNFDLLSQGQQKTDSGDK 291
           +C+ V  G+PD  ++  LN DL++Q + K +SG K
Sbjct: 229 KCVHVG-GYPDELVLDVLNDDLIAQVRNKLNSGGK 262


>AE014297-4747|AAF57152.1|  714|Drosophila melanogaster CG17998-PA
           protein.
          Length = 714

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +1

Query: 187 RCLSVTTGFPDSDLILPLNFDLLSQGQQKTDSGDK 291
           +C+ V  G+PD  ++  LN DL++Q + K +SG K
Sbjct: 229 KCVPVG-GYPDELVLDVLNDDLIAQVRNKLNSGGK 262


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,769,100
Number of Sequences: 53049
Number of extensions: 418180
Number of successful extensions: 1053
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)