Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3548
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80447-10|AAB37814.1| 477|Caenorhabditis elegans Hypothetical p... 73 2e-13
Z70306-4|CAH04694.1| 363|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U42437-4|AAA83498.2| 349|Caenorhabditis elegans Hypothetical pr... 61 9e-10
Z70306-5|CAO82011.1| 337|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical ... 50 2e-06
U28944-12|AAA68371.2| 363|Caenorhabditis elegans Hypothetical p... 33 0.21
AF100659-8|AAC68966.1| 688|Caenorhabditis elegans Hypothetical ... 33 0.28
Z50863-1|CAA90736.3| 353|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z92784-3|CAB07194.1| 318|Caenorhabditis elegans Hypothetical pr... 30 1.5
U80448-2|AAB37816.1| 321|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 28 6.0
AC024808-3|AAK29925.1| 183|Caenorhabditis elegans Hypothetical ... 28 6.0
Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical pr... 28 7.9
AL021472-4|CAA16301.1| 149|Caenorhabditis elegans Hypothetical ... 28 7.9
AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein. 28 7.9
>U80447-10|AAB37814.1| 477|Caenorhabditis elegans Hypothetical
protein F55F8.9 protein.
Length = 477
Score = 73.3 bits (172), Expect = 2e-13
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Frame = +3
Query: 99 LAKGISMVVLFCASMICGLIPQIIARKFRW--LSVEDAGTFKSTNRVVMTLLSFGGGVLL 272
+ K + M V+F ++I GL P + K R + + + K + V+ L F GGV L
Sbjct: 5 ILKLVLMFVMFSLTVIVGLSPLKVLHKLRHEAATAQSSSKHKHVSLVLCLLTCFSGGVFL 64
Query: 273 STTFMHVMPEVQENIENLQARNILQEFDFSLTPLLTCCGFFIMYLIEELVHIYI 434
+T F+H+ PE++EN+E L + + D+ + LL+C GFF+++ +EE+V + I
Sbjct: 65 ATCFLHLFPELRENLETLDTVHNFR-IDYPVGELLSCLGFFLIFFLEEVVIMII 117
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 657 LRGLLIVLALSVHELFEGLTVGLEN 731
+R + VLAL +H + EGL G+++
Sbjct: 303 VRSITFVLALGIHSIIEGLAFGVQS 327
>Z70306-4|CAH04694.1| 363|Caenorhabditis elegans Hypothetical
protein C06G8.3b protein.
Length = 363
Score = 66.1 bits (154), Expect = 2e-11
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 2/219 (0%)
Frame = +3
Query: 84 TDGIVLA-KGISMVVLFCASMICGLIPQIIARKFRWLSVEDAGTFKSTNRVVMTLLSFGG 260
T+G LA + + +VL + + G P ++ ++ G ++ + + L F G
Sbjct: 2 TEGGYLALQSVLALVLLVVTAVAGSAPLLLLT-----FLKKKGKDQNDSGWLSYLSCFSG 56
Query: 261 GVLLSTTFMHVMPEVQENI-ENLQARNILQEFDFSLTPLLTCCGFFIMYLIEELVHIYIH 437
GV ++T F+ VMP VQ+ E L+ N+ EF + L C GFF +YLIEE+
Sbjct: 57 GVFMATCFLDVMPHVQQTYGEILETYNV--EFRLPMNQLFICVGFFFVYLIEEITAKVFG 114
Query: 438 HREKNNGQTDLLVRNLSVRKSRCTEGHSNEAKNSTESGIESPXXXXXXXXXXXXXXXXXX 617
+ + + ++K + T E N + S E+
Sbjct: 115 SGGHGHSHGPPIPLTVDIKKEKVTRVQLIE--NGSSSSPET--LMIPIDSRTRHSLVVEE 170
Query: 618 XMPIQVGDDVTSALRGLLIVLALSVHELFEGLTVGLENS 734
P V D+ + L+ L +A+S H L EG +G+++S
Sbjct: 171 TAPWVVSDEKRNLLKSLTFAIAMSFHSLLEGFALGVQDS 209
>U42437-4|AAA83498.2| 349|Caenorhabditis elegans Hypothetical
protein F30B5.7 protein.
Length = 349
Score = 60.9 bits (141), Expect = 9e-10
Identities = 49/203 (24%), Positives = 81/203 (39%)
Frame = +3
Query: 126 LFCASMICGLIPQIIARKFRWLSVEDAGTFKSTNRVVMTLLSFGGGVLLSTTFMHVMPEV 305
+F + G++P I R + E + S L F GGV L+T F+ ++P +
Sbjct: 15 MFVVTAAIGIVPLFIVRVMKRSQNESEQGYLSY------LTCFAGGVFLATCFLDIIPHI 68
Query: 306 QENIENLQARNILQEFDFSLTPLLTCCGFFIMYLIEELVHIYIHHREKNNGQTDLLVRNL 485
E E L L + F+ +TCCGFF +Y IEE NGQ +
Sbjct: 69 NEGYEELMETYDLN-WHFAYPQFVTCCGFFFIYFIEEFTTFVF-----GNGQQPGHGHSH 122
Query: 486 SVRKSRCTEGHSNEAKNSTESGIESPXXXXXXXXXXXXXXXXXXXMPIQVGDDVTSALRG 665
S+ K N+ +++ + V D+ ++ L+
Sbjct: 123 SLNK-------GNKITTTSDGRLSPGMPKERKGSVNITNLRMEEASTWVVSDEKSNILKS 175
Query: 666 LLIVLALSVHELFEGLTVGLENS 734
L +A+S H L EG +G+++S
Sbjct: 176 LTFAVAMSFHSLLEGFALGVQDS 198
>Z70306-5|CAO82011.1| 337|Caenorhabditis elegans Hypothetical
protein C06G8.3c protein.
Length = 337
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Frame = +3
Query: 84 TDGIVLA-KGISMVVLFCASMICGLIPQIIARKFRWLSVEDAGTFKSTNRVVMTLLSFGG 260
T+G LA + + +VL + + G P ++ ++ G ++ + + L F G
Sbjct: 2 TEGGYLALQSVLALVLLVVTAVAGSAPLLLLT-----FLKKKGKDQNDSGWLSYLSCFSG 56
Query: 261 GVLLSTTFMHVMPEVQENI-ENLQARNILQEFDFSLTPLLTCCGFFIMYLIEEL 419
GV ++T F+ VMP VQ+ E L+ N+ EF + L C GFF +YLIEE+
Sbjct: 57 GVFMATCFLDVMPHVQQTYGEILETYNV--EFRLPMNQLFICVGFFFVYLIEEI 108
>AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical
protein Y54G9A.4 protein.
Length = 319
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Frame = +3
Query: 99 LAKGISMVVLFCASMICGLIPQIIARKFRWLSVEDAGTFKSTNRVVMTLLSFGGGVLLST 278
L K I + V+ ++I GL+P + +L+ + + ++ ++ F GGV LS
Sbjct: 5 LLKWIMLGVMALMTIIFGLLP---IKVISYLNTTKSAIHQHSSLILSLFSCFAGGVFLSV 61
Query: 279 TFMHVMPEVQENIENLQARNILQEFDFSLTPLLTCCGFFIMYLIEELVHIYIHHREKNNG 458
F+ ++P+ E E++Q D+ L+ GFF +YL EEL + + ++
Sbjct: 62 CFLDMLPDCLEAWESVQTDTNYTS-DYPFVQLIALLGFFFVYLTEELSSVICNVGHGHSH 120
Query: 459 QTD-LLVRNLSVRKSR 503
D ++ N++ ++R
Sbjct: 121 SNDPIMESNVTFPRAR 136
>U28944-12|AAA68371.2| 363|Caenorhabditis elegans Hypothetical
protein C18A3.2 protein.
Length = 363
Score = 33.1 bits (72), Expect = 0.21
Identities = 30/164 (18%), Positives = 71/164 (43%), Gaps = 5/164 (3%)
Frame = +3
Query: 261 GVLLSTTFMHVMPEVQENIENLQA-RNILQEFDF-SLTPLLTCCGFFIMYLIEELVHIYI 434
GV ++T F+ ++P V+ +L+ + I+ + + T L GF I+ + E+++H
Sbjct: 50 GVFIATCFLGLVPHVRHQEMHLRGNQTIVDSYGWIPSTDQLVIIGFLIILITEQIIHGIG 109
Query: 435 H---HREKNNGQTDLLVRNLSVRKSRCTEGHSNEAKNSTESGIESPXXXXXXXXXXXXXX 605
H + ++G + L + S++ ++ + E + ++
Sbjct: 110 HSIGNGHSHSGHSPLATSD-SIKMNKFHDEEEGE-DHVPLVAMDDDADEIIFRQNTSPHH 167
Query: 606 XXXXXMPIQVGDDVTSALRGLLIVLALSVHELFEGLTVGLENST 737
+ + +R ++L +SVH FEG+ +G++N +
Sbjct: 168 HAPSSGHCRTAPGGSMNIRVWFLLLGMSVHSFFEGVALGVQNDS 211
>AF100659-8|AAC68966.1| 688|Caenorhabditis elegans Hypothetical
protein F58E2.3 protein.
Length = 688
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 244 CSPSEAVCCSQRLSCTSCLKSKRTLKICKRGTFSKNLISH 363
C V S+ L CTS S+ ++K+ G KN++SH
Sbjct: 296 CEELRNVQSSKELECTSLCTSELSIKVLHNGLLMKNILSH 335
>Z50863-1|CAA90736.3| 353|Caenorhabditis elegans Hypothetical
protein C14H10.1 protein.
Length = 353
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 243 LLSFGGGVLLSTTFMHVMPEVQENIEN 323
LL F G LL+ F+H++PE E+ EN
Sbjct: 150 LLGFAIGSLLADVFLHLLPEAYESNEN 176
>Z92784-3|CAB07194.1| 318|Caenorhabditis elegans Hypothetical
protein F31C3.4 protein.
Length = 318
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +3
Query: 636 GDDVT--SALRGLLIVLALSVHELFEGLTVGL 725
GD+ S++ ++VLALSVH LFEGL++ +
Sbjct: 156 GDEAAAQSSIGVAMLVLALSVHALFEGLSLAV 187
>U80448-2|AAB37816.1| 321|Caenorhabditis elegans Hypothetical
protein F59A3.4 protein.
Length = 321
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 660 RGLLIVLALSVHELFEGLTVGL 725
R LL++LA++VH + EGL VG+
Sbjct: 172 RILLLILAVTVHNIPEGLAVGV 193
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -2
Query: 299 RHDVHESR*EQHTASEGEQSHHHPVRRLERPRVFYGEPSKLSRDDL 162
+H +H +QH AS Q HHP R P Y +PS + L
Sbjct: 92 QHQLHHQN-QQHQASTSTQQFHHPQR---PPPPQYDQPSSSTGSSL 133
>AC024808-3|AAK29925.1| 183|Caenorhabditis elegans Hypothetical
protein Y53G8AM.6 protein.
Length = 183
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2
Query: 497 LAHAQISDQ*ICLSIILLSVMNVYVHQFFYQI 402
LA Q+S + +C+ I+L V NV+VH +Y +
Sbjct: 46 LASFQVSIE-VCVRILLSLVHNVFVHASYYNV 76
>Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical
protein DY3.7 protein.
Length = 922
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 244 CSPSEAVCCSQRLSCTSCLKSKRTLKICKRGTFSKNL 354
CSPS+ CC+ T L K KIC++ + NL
Sbjct: 564 CSPSQGYCCNPD---TCSLHGKNEEKICRQESECSNL 597
>AL021472-4|CAA16301.1| 149|Caenorhabditis elegans Hypothetical
protein Y17D7B.4 protein.
Length = 149
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 247 SPSEAVCCSQRLSCTSCLKSKRTLKICKRGT 339
+PS+AVC + C + ++ T CK GT
Sbjct: 74 TPSQAVCNVSNVDCGTYVRGPETWSSCKLGT 104
>AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein.
Length = 922
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 244 CSPSEAVCCSQRLSCTSCLKSKRTLKICKRGTFSKNL 354
CSPS+ CC+ T L K KIC++ + NL
Sbjct: 564 CSPSQGYCCNPD---TCSLHGKNEEKICRQESECSNL 597
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,008,865
Number of Sequences: 27780
Number of extensions: 365891
Number of successful extensions: 1132
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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