Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3547
(738 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 217 1e-56
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 208 3e-54
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 136 2e-32
06_01_0539 + 3869156-3869908 134 5e-32
06_01_0529 + 3831100-3831852 134 5e-32
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 121 7e-28
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 116 1e-26
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 115 5e-26
06_01_0479 + 3419657-3420337 108 5e-24
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 87 1e-17
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 79 6e-17
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380... 70 2e-12
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 53 3e-07
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209... 40 0.003
02_05_0884 - 32483735-32483866,32484417-32484491,32484707-324847... 38 0.006
08_02_0230 - 14572854-14574632 31 0.72
11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361... 31 1.3
08_02_1498 + 27553449-27553730,27553834-27553946,27554063-275541... 30 1.7
03_02_0472 - 8737955-8738580,8738704-8738767,8739090-8739239,873... 30 2.2
01_07_0124 + 41212728-41212922,41215156-41215210,41215336-412171... 30 2.2
06_01_1007 + 7846266-7846526,7848368-7848420,7849231-7849432,784... 29 2.9
02_05_0902 + 32620668-32621209,32621847-32622258,32622471-326226... 29 2.9
06_02_0303 + 14022428-14022652,14023247-14024159,14024310-140247... 29 5.1
10_01_0108 + 1337009-1338190 28 6.7
01_06_1116 + 34629592-34630578,34631058-34631686,34632589-34632679 28 6.7
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 217 bits (529), Expect = 1e-56
Identities = 98/174 (56%), Positives = 133/174 (76%)
Frame = +1
Query: 106 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYE 285
MSSIGTGYDLS + FSPDGRVFQVEYA KAV+NSGTV+G++ KDG+V VEKL+TSK+
Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQVEYAGKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMIL 60
Query: 286 PGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYM 465
G+N+R+ + H G+AVAGL +D RQIV A+SEA++Y YG P+P+K L +RV+ Y+
Sbjct: 61 KGSNRRLHSVHRHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPMPVKELADRVASYV 120
Query: 466 HAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGWRSRKSQTGSK 627
H TLY +RP+GC V++G + D +GPQ+YM++PSG+S+ YFG K + +K
Sbjct: 121 HLCTLYWWLRPFGCGVILGGY-DRDGPQLYMIEPSGLSYKYFGAALGKGRQAAK 173
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +2
Query: 632 EIEKLKLGDLTVKELVREAARIIYLVHDELKDKQF 736
EIEKL L +LT +E + E A+IIY VHDE KDK F
Sbjct: 202 EIEKLNLSELTCREGIVEVAKIIYGVHDEAKDKDF 236
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 208 bits (509), Expect = 3e-54
Identities = 102/189 (53%), Positives = 134/189 (70%), Gaps = 8/189 (4%)
Frame = +1
Query: 106 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYE 285
MSSIGTGYDLS + FSPDGRVFQVEYA KAV+NSGTV+G++ KDG+V VEKL+TSK+
Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMML 60
Query: 286 PGANKRIFHIDEHVG--------MAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYL 441
G+N+RI + H G MAVAGL +D RQIV A+SEA++Y YG P+ +K L
Sbjct: 61 EGSNRRIHSVHWHSGLDIILINVMAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKEL 120
Query: 442 NERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGWRSRKSQTG 621
+RV+ Y+H TLY +RP+GC V++G + D +GPQ+YM++PSGVS+ YFG K +
Sbjct: 121 ADRVASYVHLCTLYWWLRPFGCGVILGGY-DRDGPQLYMIEPSGVSYKYFGAALGKGRQA 179
Query: 622 SKNRDRKAK 648
+K K K
Sbjct: 180 AKTEIEKLK 188
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2
Query: 629 TEIEKLKLGDLTVKELVREAARIIYLVHDELKDKQF 736
TEIEKLKL +LT +E + E A+IIY VHDE KDK F
Sbjct: 182 TEIEKLKLSELTCREGIVEVAKIIYGVHDEAKDKAF 217
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 136 bits (328), Expect = 2e-32
Identities = 72/175 (41%), Positives = 108/175 (61%), Gaps = 3/175 (1%)
Frame = +1
Query: 121 TGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANK 300
T YD + FSP+GR+FQVEYA +A++ T IGL+ KDGVV AVEK +TS L EP + +
Sbjct: 19 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVE 78
Query: 301 RIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERV---SMYMHA 471
+I IDEH+G A++GLI+DAR +VE AR E N+R YG P+ ++ + + ++
Sbjct: 79 KIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGE 138
Query: 472 YTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGWRSRKSQTGSKNRD 636
S RP+G S+++ D GP +Y DPSG +++ ++ +GS+ D
Sbjct: 139 GDEESMSRPFGVSLLI-AGHDENGPSLYYTDPSG---TFWQCNAKAIGSGSEGAD 189
>06_01_0539 + 3869156-3869908
Length = 250
Score = 134 bits (325), Expect = 5e-32
Identities = 63/160 (39%), Positives = 99/160 (61%), Gaps = 1/160 (0%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KR 303
YD + FSP+GR++QVEYA +A+ N+G+ +G+ DGVV EK +TSKL + + ++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEK 64
Query: 304 IFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLY 483
++ ID H+ AVAG++SDA ++ TAR A Y Y P+P++ L + + YT +
Sbjct: 65 MYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQF 124
Query: 484 SAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGWRS 603
+RP+G S + W + G Q+YM DPSG +Y GW++
Sbjct: 125 GGLRPFGVSFLFAGWDKHHGFQLYMSDPSG---NYSGWKA 161
>06_01_0529 + 3831100-3831852
Length = 250
Score = 134 bits (325), Expect = 5e-32
Identities = 63/160 (39%), Positives = 99/160 (61%), Gaps = 1/160 (0%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KR 303
YD + FSP+GR++QVEYA +A+ N+G+ +G+ DGVV EK +TSKL + + ++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEK 64
Query: 304 IFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLY 483
++ ID H+ AVAG++SDA ++ TAR A Y Y P+P++ L + + YT +
Sbjct: 65 MYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQF 124
Query: 484 SAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGWRS 603
+RP+G S + W + G Q+YM DPSG +Y GW++
Sbjct: 125 GGLRPFGVSFLFAGWDKHHGFQLYMSDPSG---NYSGWKA 161
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 121 bits (291), Expect = 7e-28
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 1/169 (0%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 306
YD + + FSPDG +FQVEYA +AV +G+RG D VV VEK T KL + + ++I
Sbjct: 74 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKI 133
Query: 307 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYS 486
+D H+ +A AGL +DAR ++ AR E ++R PV ++Y+ ++ YT
Sbjct: 134 ASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSG 193
Query: 487 AVRPYGCSVVMGTWTDY-EGPQMYMLDPSGVSFSYFGWRSRKSQTGSKN 630
VRP+G S ++ + Y E P +Y DPSG ++ W++ + S +
Sbjct: 194 GVRPFGLSTLIVGFDPYTEKPALYQTDPSG---TFSAWKANATGRNSNS 239
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 116 bits (280), Expect = 1e-26
Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 1/169 (0%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 306
YD + + FSPDG +FQVEYA +AV +G+RG D VV VEK T KL + + ++I
Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKI 63
Query: 307 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYS 486
+D H+ +A AGL +DAR ++ AR E ++R V ++Y+ ++ YT
Sbjct: 64 ASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSG 123
Query: 487 AVRPYGCSVVMGTWTDY-EGPQMYMLDPSGVSFSYFGWRSRKSQTGSKN 630
VRP+G S ++ + Y + P +Y DPSG ++ W++ + S +
Sbjct: 124 GVRPFGLSTLIVGFDPYTDKPALYQTDPSG---TFSAWKANATGRNSNS 169
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 115 bits (276), Expect = 5e-26
Identities = 56/158 (35%), Positives = 97/158 (61%), Gaps = 1/158 (0%)
Frame = +1
Query: 118 GTGYDLSASQFSPDGRVFQVEYAAKAVENSG-TVIGLRGKDGVVFAVEKLITSKLYEPGA 294
G GYD + FSP+GR++QVEYA KAV+++G T IG+RGKD V +K + KL + +
Sbjct: 6 GAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTS 65
Query: 295 NKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAY 474
+F I +++G+ GL +DAR +V AR+EA+ +R ++G +P+ L + ++ Y
Sbjct: 66 VTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVY 125
Query: 475 TLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSY 588
T ++ +RP G ++ + + + Q++ DP+G F +
Sbjct: 126 TQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGH 163
>06_01_0479 + 3419657-3420337
Length = 226
Score = 108 bits (259), Expect = 5e-24
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Frame = +1
Query: 190 KAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KRIFHIDEHVGMAVAGLISDARQ 366
+A+ N+G+ +G+ DGVV EK +TSKL + + ++++ ID H+ AVAG++SDA
Sbjct: 2 EAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANI 61
Query: 367 IVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGP 546
++ TAR A Y Y P+P++ L + + YT + +RP+G S + W + G
Sbjct: 62 LLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF 121
Query: 547 QMYMLDPSGVSFSYFGWRS 603
Q+YM DPSG +Y GW++
Sbjct: 122 QLYMSDPSG---NYSGWKA 137
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 87.4 bits (207), Expect = 1e-17
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 23/182 (12%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGK-----------------------D 237
Y S + FSP G++ Q+E+A AV + T +G++G +
Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKGASREAIPSLYFYCVMRIEKGRGAAN 65
Query: 238 GVVFAVEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYG 417
GVV A EK + S L + + ++I + ++G+ +G+ D R +V +R +A Y Y
Sbjct: 66 GVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYK 125
Query: 418 SPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGW 597
+P+ L + M +T VRP+G S+++ + D GPQ+Y +DPSG SYF W
Sbjct: 126 ETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDD-NGPQLYQVDPSG---SYFSW 181
Query: 598 RS 603
++
Sbjct: 182 KA 183
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 78.6 bits (185), Expect(2) = 6e-17
Identities = 40/123 (32%), Positives = 68/123 (55%)
Frame = +1
Query: 235 DGVVFAVEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQY 414
+GVV A EK + S L + + ++I + ++G+ +G+ D R +V +R +A Y Y
Sbjct: 102 NGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLY 161
Query: 415 GSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFG 594
+P+ L + M +T VRP+G S+++ + D GPQ+Y +DPSG SYF
Sbjct: 162 KETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDD-NGPQLYQVDPSG---SYFS 217
Query: 595 WRS 603
W++
Sbjct: 218 WKA 220
Score = 26.6 bits (56), Expect(2) = 6e-17
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 151 SPDGRVFQVEYAAKAVENSGTVIGLR 228
SP G++ Q+E+A AV + T +G++
Sbjct: 44 SPSGKLVQIEHALTAVGSGQTSLGIK 69
>07_03_1256 -
25237465-25237590,25237833-25237918,25238025-25238083,
25238516-25238612,25239582-25239663,25239752-25240096
Length = 264
Score = 69.7 bits (163), Expect = 2e-12
Identities = 39/139 (28%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Frame = +1
Query: 178 EYAAKAVENSG-TVIGLRGKDGVVFAVEKLITSKLYEPGANKRIFHIDEHVGMAVAGLIS 354
+YA AV+ +G T +G+RG D V + KL++P +F I + +G+ G+
Sbjct: 85 DYAFNAVKLAGITSVGVRGDDSVYVLTHRK-EDKLHDPTTITNLFAITDRIGLLATGMPG 143
Query: 355 DARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYG-CSVVMGTWT 531
D R I + AR+ A+ +R ++G + L + ++ T ++ +RPYG S++ G
Sbjct: 144 DGRAIAQEARNAAAEFRFKWGYKMSPCMLAQWIADRAQIRTQHAQIRPYGVVSMIFGIDE 203
Query: 532 DYEGPQMYMLDPSGVSFSY 588
+ P+++ DP+G F++
Sbjct: 204 EKGTPELFTCDPAGQFFAH 222
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/89 (30%), Positives = 47/89 (52%)
Frame = +1
Query: 190 KAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQI 369
+AV+ +GLR + V A S+L +++F + +H G+A+AGL +D R +
Sbjct: 2 EAVKQGSACVGLRSRTHAVLAAANKAASEL--SSHQRKVFRVADHAGVALAGLTADGRVL 59
Query: 370 VETARSEASNYRSQYGSPVPLKYLNERVS 456
RSE N+ Y +P+P+ L R++
Sbjct: 60 SRFLRSECINHAFVYDAPLPVSRLALRLA 88
>06_01_0285 -
2090427-2090558,2091045-2091119,2091334-2091407,
2091792-2091903,2092036-2092108,2092291-2092346,
2092679-2092755,2093384-2093525
Length = 246
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +1
Query: 211 TVIGLRGKDGVVFAVEKLITSKLYEPG-ANKRIFHIDEHVGMAVAGLISDARQIVETARS 387
T++G+ GVV A + ++ +Y A+ +I + ++V + +G +D + I E R
Sbjct: 27 TIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQVISEYVRY 86
Query: 388 EASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDP 567
+ Q G P +K + + AY + ++ +++G W YEG Q++ +
Sbjct: 87 FLHQHTIQLGQPATVKVAANLIRLL--AYQNKNMLQ---AGMIVGGWDKYEGGQIFSVPL 141
Query: 568 SG 573
G
Sbjct: 142 GG 143
>02_05_0884 -
32483735-32483866,32484417-32484491,32484707-32484780,
32485180-32485291,32485476-32485548,32485674-32485729,
32486046-32486122,32486799-32486940
Length = 246
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +1
Query: 211 TVIGLRGKDGVVFAVEKLITSKLYEPG-ANKRIFHIDEHVGMAVAGLISDARQIVETARS 387
T++G+ GVV A + ++ +Y A+ +I + ++V + +G +D + I + R
Sbjct: 27 TIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYICRSGSAADTQVISDYVRY 86
Query: 388 EASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDP 567
+ Q G P +K + + AY + ++ +++G W YEG Q++ +
Sbjct: 87 FLHQHTIQLGQPATVKVAANLIRLL--AYQNKNMLQ---AGMIVGGWDKYEGGQIFSVPL 141
Query: 568 SG 573
G
Sbjct: 142 GG 143
>08_02_0230 - 14572854-14574632
Length = 592
Score = 31.5 bits (68), Expect = 0.72
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 610 SQTGSKNRDRKAKTWRPHSEGAC 678
+Q G+ + +RK TWR HS GAC
Sbjct: 502 NQDGTDHINRKIATWRTHSAGAC 524
>11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,
3611984-3612217,3614113-3614138,3614446-3614633,
3615707-3617670,3617938-3618423,3618527-3618894
Length = 2207
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 82 KYIKQCVNMSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTV-IGLRGKDGVVFAV 255
+ I C + S G + +F P G ++QV Y+ A ENS T GL + +V +
Sbjct: 1957 RIITACSTVDSKGNDFKALIYEFMPRGDLYQVLYSTCADENSSTSHFGLAQRVSIVMDI 2015
>08_02_1498 +
27553449-27553730,27553834-27553946,27554063-27554129,
27554310-27554402,27554516-27554659,27554860-27554954,
27555120-27555412,27555514-27555632,27555742-27556094,
27556177-27556286,27556403-27556512,27556802-27557671
Length = 882
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -3
Query: 529 SMCP*RLSNHMAEQHCIVCMRACTLKLVHLNTSVVLDCHTEICSLTPLNEQSRQFVLH 356
++C LSNH ++ V R + + S++ DC T + S +N Q Q H
Sbjct: 412 NVCVAFLSNHNTKEDGTVTFRGQKYFVARRSISILADCKTVVFSTQHVNSQHNQRTFH 469
>03_02_0472 -
8737955-8738580,8738704-8738767,8739090-8739239,
8739311-8739422,8739686-8739708
Length = 324
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 1/107 (0%)
Frame = +1
Query: 382 RSEASNYR-SQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMYM 558
R S+YR S+Y S P +Y ER Y H+ + Y R Y S +++ PQ
Sbjct: 209 RRSYSSYRGSRYRSRSPYRYRRERSCSYDHSVSPYYR-RCYSPSARGRSYSRSVSPQRSY 267
Query: 559 LDPSGVSFSYFGWRSRKSQTGSKNRDRKAKTWRPHSEGACERSR*NY 699
G S + + + R + + HS + SR +Y
Sbjct: 268 SHSCSPDSQRSGSYSPRKRYSERKPSRSRSSGKRHSRESYSHSRSSY 314
>01_07_0124 +
41212728-41212922,41215156-41215210,41215336-41217128,
41217363-41217521,41217883-41218054,41218173-41218471,
41219060-41219368
Length = 993
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 443 MNEFQCTCTHTHYTVLFGHMVAQSLWAHG--QTM 538
M C CT T+ HMV + +WA G QTM
Sbjct: 451 MGSASCICTDKTGTLTTNHMVVEKIWASGAAQTM 484
>06_01_1007 +
7846266-7846526,7848368-7848420,7849231-7849432,
7849526-7849609,7850005-7850188,7850605-7850741,
7850875-7850939,7851093-7851762
Length = 551
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2
Query: 479 YTVLFGHMVAQSLWAHG 529
YT L GH V QS WAHG
Sbjct: 427 YTELPGHSVVQSRWAHG 443
>02_05_0902 +
32620668-32621209,32621847-32622258,32622471-32622675,
32622712-32622806,32622945-32623557,32623652-32623820,
32624392-32624749,32625226-32625336,32626207-32626561,
32627262-32627484,32627837-32628058,32628628-32628781
Length = 1152
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -2
Query: 254 TANTTPSFPRRPITVPEFSTAFAAYSTWKTRPS 156
+++++ FP P++ PE S+A AA S W + PS
Sbjct: 32 SSSSSSLFPLFPLSAPEESSAPAAGSQWLSNPS 64
>06_02_0303 +
14022428-14022652,14023247-14024159,14024310-14024700,
14024949-14025206,14025284-14025394,14025486-14025564,
14025842-14026027
Length = 720
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 415 GSPVPLKYLNERVSMYMHAYT 477
G P+P++Y NER ++HA T
Sbjct: 123 GKPIPMEYHNERARNWVHART 143
>10_01_0108 + 1337009-1338190
Length = 393
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 502 GCSVVMGTWTDYEGPQMYML 561
GCS+++ TW D G ++ ML
Sbjct: 106 GCSIILDTWLDENGRRLMML 125
>01_06_1116 + 34629592-34630578,34631058-34631686,34632589-34632679
Length = 568
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 335 AMPTCSSIWNILLFAPGSYN-FDVINFSTANTTPSFPRRPITVPEFSTAFAAYSTW 171
A+P S IW LL A + N FD++ ++ P P S +A+ S W
Sbjct: 396 AIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQW 451
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,473,156
Number of Sequences: 37544
Number of extensions: 409892
Number of successful extensions: 1080
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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