Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3547
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 171 6e-43
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 119 2e-27
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 113 1e-25
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 109 2e-24
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 108 4e-24
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 103 1e-22
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 96 3e-20
AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical ... 30 2.0
Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 28 6.0
Z82262-2|CAB05152.1| 248|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 171 bits (415), Expect = 6e-43
Identities = 80/181 (44%), Positives = 118/181 (65%)
Frame = +1
Query: 106 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYE 285
MSSIGTGYDL+AS FSPDGR+FQVEYA KAV+N+GT+I +RGK+GVV +KLI+SKLY
Sbjct: 1 MSSIGTGYDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYT 60
Query: 286 PGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYM 465
AN R+F+++++VG+AVAG D + A EA + Y P+P++ + V+ Y+
Sbjct: 61 DNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYI 120
Query: 466 HAYTLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGWRSRKSQTGSKNRDRKA 645
H +TL RP+G +W G ++++++PSG+++ Y W K + +K K
Sbjct: 121 HIHTL-GISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKL 179
Query: 646 K 648
K
Sbjct: 180 K 180
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +2
Query: 632 EIEKLKLGDLTVKELVREAARIIYLVHDELKDK 730
EIEKLK+ +L V +LV+EAARII +V DE KDK
Sbjct: 175 EIEKLKIEELDVNQLVKEAARIIMVVRDENKDK 207
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 119 bits (286), Expect = 2e-27
Identities = 59/155 (38%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 306
YD + + FSPDG +FQVEYA +AV+ T +G+RGKD +V VEK L + ++I
Sbjct: 4 YDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKI 63
Query: 307 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYS 486
ID+HV +A AGL +DAR +V+ AR E +Y+ PV + Y++ ++ +T
Sbjct: 64 HMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSP 123
Query: 487 AVRPYGCSVVMGTWTDYEG-PQMYMLDPSGVSFSY 588
RP+G S+++G + D++G P+++ +PSG + Y
Sbjct: 124 GRRPFGISMLIGGF-DHDGTPRLFKTEPSGAYYEY 157
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 113 bits (272), Expect = 1e-25
Identities = 52/160 (32%), Positives = 94/160 (58%), Gaps = 1/160 (0%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGA-NKR 303
YD + FSP+GR++QVEYA +A+ ++GT +G+ +G+V A E+ KL + ++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEK 64
Query: 304 IFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLY 483
++ + +++ VAG+ +DA ++ R A++YR+ YG +P++ L + + YT
Sbjct: 65 VYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQI 124
Query: 484 SAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGWRS 603
RP+G S++ W + G Q+Y DPSG +Y GW++
Sbjct: 125 GGKRPFGVSLLYIGWDKHYGYQLYQSDPSG---NYTGWKA 161
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 109 bits (263), Expect = 2e-24
Identities = 64/181 (35%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Frame = +1
Query: 115 IGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGA 294
+G Y S + FSP G++ Q+EYA AV+N +GLR KDGVV A E + S L +
Sbjct: 1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATEN-VGSVLTDD-- 57
Query: 295 NKRIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAY 474
++ I +H+G +G+ D R +V+ AR A Y YG +P L ++ M Y
Sbjct: 58 QPKVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEY 117
Query: 475 TLYSAVRPYGCSVVMGTWTDYEG-PQMYMLDPSGVSFSYFGWRSRKSQTGSKNRDRKAKT 651
T VRP+G S+++ W G P ++ DPSG +YF W++ T D AKT
Sbjct: 118 TQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSG---AYFAWKA----TALGKNDVNAKT 170
Query: 652 W 654
+
Sbjct: 171 F 171
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 108 bits (260), Expect = 4e-24
Identities = 58/153 (37%), Positives = 92/153 (60%), Gaps = 4/153 (2%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 306
YD + FSP+GR+FQVEYA +AV+ T IG++ +GV+ A EK TSKL A ++I
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKI 67
Query: 307 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAY---- 474
+D+H+G+ AGLI+D+R +VE A+ EA N+ Y + ++ + + V+ +
Sbjct: 68 SKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDD 127
Query: 475 TLYSAVRPYGCSVVMGTWTDYEGPQMYMLDPSG 573
S RP+G +++ D EG +++ LDPSG
Sbjct: 128 VKASMSRPFGVAMLF-AGVDQEGAKLFHLDPSG 159
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 103 bits (248), Expect = 1e-22
Identities = 48/151 (31%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Frame = +1
Query: 124 GYDLSASQFSPDGRVFQVEYAAKAVENSG-TVIGLRGKDGVVFAVEKLITSKLYEPGANK 300
G+D + FSP+GRV+QVEYA KA+ ++ T + ++G D V AV+K + L
Sbjct: 8 GFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVT 67
Query: 301 RIFHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTL 480
++ I + VG G+I DA+ ++ A+ EA++++ + G +P + L ++++ YT
Sbjct: 68 SVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQ 127
Query: 481 YSAVRPYGCSVVMGTWTDYEGPQMYMLDPSG 573
+ +R GC+++ ++ D +GP++Y +DP+G
Sbjct: 128 NAEMRSLGCALLFISYDDEKGPEVYRVDPAG 158
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 95.9 bits (228), Expect = 3e-20
Identities = 49/156 (31%), Positives = 83/156 (53%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 306
YD + +SP GR+ QVEYA +A++ +G++ + V K + L K++
Sbjct: 6 YDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDL--SSHQKKV 63
Query: 307 FHIDEHVGMAVAGLISDARQIVETARSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYS 486
+ ID H G+++AGL+SD R + ++E S++R Y VP+K L E + + + A T Y
Sbjct: 64 YEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYY 123
Query: 487 AVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFG 594
RP+G +++ + D +G + DPS S G
Sbjct: 124 GRRPFGVGILIAGY-DKDGAHIIQTDPSAEVVSMHG 158
>AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical
protein Y71H2AM.10 protein.
Length = 871
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = -2
Query: 392 ASERAVSTICLASDMSPATAMPTCSSIWNILLFAPGSYNFDV-INFSTANTTPS----FP 228
A + + C++SD + PTCSS++ + GS + V ++ TT S FP
Sbjct: 327 AEDVTTQSHCISSDANIIKVSPTCSSVYLDGSESNGSSDAQVYAHYLRYTTTYSFRVWFP 386
Query: 227 RRPITVPEFSTAFAAYSTWK 168
+ P+ + S+ + WK
Sbjct: 387 KLPLKIWMSSSTLSTIKNWK 406
>Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical
protein T21B10.2b protein.
Length = 337
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 82 KYIKQCVNMSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIG 222
KYI + I G D++AS+F DG+ + +++ A ++S + G
Sbjct: 132 KYIAELAGTGKISIGMDVAASEFFKDGK-YDLDFKNPASDSSKWLSG 177
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 481 YSAVRPYGCSVVMGTWTDYEGPQMYMLDPSGVSFSYFGWRSRKS 612
+SA+R Y D EG + ML P+G+ + WR S
Sbjct: 418 HSAIRRYSQRKKKAPLNDLEGGKCTMLSPTGLFAKFKNWRRGSS 461
>Z82262-2|CAB05152.1| 248|Caenorhabditis elegans Hypothetical
protein C43F9.5 protein.
Length = 248
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 443 MNEFQCTCTHTHYTVLFGHMVAQSLWAHGQTMKALRC 553
MN CT T YT G + A S GQT + RC
Sbjct: 143 MNGICCTTTGNEYTGSCGGLPAISACGTGQTCGSFRC 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,203,728
Number of Sequences: 27780
Number of extensions: 376294
Number of successful extensions: 945
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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