Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3538
         (676 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0265 + 15541329-15541568,15541653-15541901,15542172-155423...    29   3.4  
01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242           29   4.5  

>11_04_0265 +
           15541329-15541568,15541653-15541901,15542172-15542321,
           15542427-15542901,15543132-15543445,15543875-15543973,
           15544567-15544659,15544737-15544922
          Length = 601

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +2

Query: 515 CG--NSSQNCQTQASSFQIGRLHRSPKRLGIKGQKKVVKPVTKALKAQRK 658
           CG  NSS+  +      ++ + ++ P RLG  G    V+  TK ++  RK
Sbjct: 160 CGIINSSEELERSKKFLELAKKNKFPHRLGFAGYAPKVEQWTKEVEEMRK 209


>01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242
          Length = 417

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 116 VSQNTGTCPESSCACPETSC 175
           ++++  TCP + C CPE  C
Sbjct: 116 ITEHEKTCPHAPCFCPEPGC 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,190,452
Number of Sequences: 37544
Number of extensions: 92314
Number of successful extensions: 280
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 280
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)