Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3521
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14634-1|AAA21559.1| 222|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical pr... 36 0.022
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 30 1.9
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 30 1.9
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 30 1.9
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 30 1.9
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 30 1.9
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 29 2.6
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 28 5.9
>U14634-1|AAA21559.1| 222|Caenorhabditis elegans Hypothetical
protein T15B12.1a protein.
Length = 222
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 644 FRRAGPDGLAFCALLHHFLPDAFDYFKTD 730
F + DG+AFCAL+H F P++FD+ K D
Sbjct: 138 FSSSWADGMAFCALIHRFAPNSFDFSKLD 166
>Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical
protein W04D2.1b protein.
Length = 894
Score = 36.3 bits (80), Expect = 0.022
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 638 RTFRRAGPDGLAFCALLHHFLPDAFDY 718
+ F + DGLAFCAL+H PD DY
Sbjct: 173 QNFHNSWKDGLAFCALIHRHRPDLLDY 199
>Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical
protein W04D2.1a protein.
Length = 920
Score = 36.3 bits (80), Expect = 0.022
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 638 RTFRRAGPDGLAFCALLHHFLPDAFDY 718
+ F + DGLAFCAL+H PD DY
Sbjct: 173 QNFHNSWKDGLAFCALIHRHRPDLLDY 199
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 638 RTFRRAGPDGLAFCALLHHFLPDAFDY 718
+ F + DGLAF AL+H PD DY
Sbjct: 182 KNFSTSWRDGLAFNALIHKHRPDLVDY 208
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 638 RTFRRAGPDGLAFCALLHHFLPDAFDY 718
+ F + DGLAF AL+H PD DY
Sbjct: 182 KNFSTSWRDGLAFNALIHKHRPDLVDY 208
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 638 RTFRRAGPDGLAFCALLHHFLPDAFDY 718
+ F + DGLAF AL+H PD DY
Sbjct: 182 KNFSTSWRDGLAFNALIHKHRPDLVDY 208
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 638 RTFRRAGPDGLAFCALLHHFLPDAFDY 718
+ F + DGLAF AL+H PD DY
Sbjct: 182 KNFSTSWRDGLAFNALIHKHRPDLVDY 208
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 638 RTFRRAGPDGLAFCALLHHFLPDAFDY 718
+ F + DGLAF AL+H PD DY
Sbjct: 182 KNFSTSWRDGLAFNALIHKHRPDLVDY 208
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 602 QNSTNSPKM*SWRTFRRAGPDGLAFCALLHHFLPDAFDYFKT 727
Q TN F ++ +GLA CA+LH + PD ++T
Sbjct: 342 QRVTNGYSHVKVNDFMKSWNNGLALCAVLHSYRPDLIGDYET 383
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 602 QNSTNSPKM*SWRTFRRAGPDGLAFCALLHHFLPDAFDYFKT 727
Q TN F ++ +GLA CA+LH + PD ++T
Sbjct: 342 QRVTNGYSHVKVNDFMKSWNNGLALCAVLHSYRPDLIGDYET 383
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = -1
Query: 460 CHRNFFFFARFGALPRRLARCLQRFCHRARACFLFGHECADACPQPTSLLVIATLVQEFP 281
C FF F F LP+ L C FC+ +C + D CP + + QE P
Sbjct: 34 CSICFFDFDDFQHLPKLLENCGHTFCY---SCLFDWLKSQDTCPMCREAV---NMTQEIP 87
Query: 280 EHAFVPAL 257
+ + A+
Sbjct: 88 TNVEILAV 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,837,582
Number of Sequences: 27780
Number of extensions: 222809
Number of successful extensions: 605
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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