Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3517
         (691 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071401-1|AAL49023.1|  592|Drosophila melanogaster RE48767p pro...    30   3.4  
AE014296-978|AAF50762.2|  592|Drosophila melanogaster CG10590-PA...    30   3.4  
BT025958-1|ABG02202.1|  500|Drosophila melanogaster IP15793p pro...    29   6.0  
AF500096-1|AAM18530.1|  500|Drosophila melanogaster peptidoglyca...    29   6.0  
AE014296-1610|AAF50302.3|  500|Drosophila melanogaster CG4432-PA...    29   6.0  

>AY071401-1|AAL49023.1|  592|Drosophila melanogaster RE48767p
           protein.
          Length = 592

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 552 YYCRYIYGFFV*LADLLLLRTPSIMINCNTFSLRTRGLRW 433
           Y   Y+YGF + +  +L + T  + I C  F L     RW
Sbjct: 478 YKIYYVYGFMLLVFSILTVVTVCVTIVCTYFLLNAEDYRW 517


>AE014296-978|AAF50762.2|  592|Drosophila melanogaster CG10590-PA
           protein.
          Length = 592

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 552 YYCRYIYGFFV*LADLLLLRTPSIMINCNTFSLRTRGLRW 433
           Y   Y+YGF + +  +L + T  + I C  F L     RW
Sbjct: 478 YKIYYVYGFMLLVFSILTVVTVCVTIVCTYFLLNAEDYRW 517


>BT025958-1|ABG02202.1|  500|Drosophila melanogaster IP15793p
           protein.
          Length = 500

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 437 RKPRVRRLKVLQLIIIDGVRSKSKSASY 520
           RKP  R+L+  QL++ +GVR K  + +Y
Sbjct: 441 RKPNERQLEACQLLLQEGVRLKKLTTNY 468


>AF500096-1|AAM18530.1|  500|Drosophila melanogaster peptidoglycan
           recognition protein-LC isoform x protein.
          Length = 500

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 437 RKPRVRRLKVLQLIIIDGVRSKSKSASY 520
           RKP  R+L+  QL++ +GVR K  + +Y
Sbjct: 441 RKPNERQLEACQLLLQEGVRLKKLTTNY 468


>AE014296-1610|AAF50302.3|  500|Drosophila melanogaster CG4432-PA,
           isoform A protein.
          Length = 500

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 437 RKPRVRRLKVLQLIIIDGVRSKSKSASY 520
           RKP  R+L+  QL++ +GVR K  + +Y
Sbjct: 441 RKPNERQLEACQLLLQEGVRLKKLTTNY 468


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,625,561
Number of Sequences: 53049
Number of extensions: 491443
Number of successful extensions: 1005
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)