Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3507
         (512 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens ...    30   5.5  
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    29   9.5  

>AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46559 fis, clone THYMU3040126. ).
          Length = 303

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
 Frame = -1

Query: 488 HYLIRAYNTIYFVITGNMWLTYYHTYNVHNAKTFVYIYTILHAVYYYCTC---CMLTSRI 318
           H  I  Y  +Y  I  + ++ + H Y   +    +++Y  ++   Y CTC   C+ T   
Sbjct: 22  HTYIYTYTCMYVCIYSHTYI-HTHVYVCVHIHICIHMYMCVYTHIYACTCVCVCVHTHTY 80

Query: 317 CILCFISVTGSYLNI 273
             +C    T  Y+++
Sbjct: 81  TCICVCVHTHIYIHM 95


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = -1

Query: 479 IRAYNTIYFVITGNMWLTYYHTYNVHNAKTFVYIYTILHAVYYYCTCCMLTSRICILCFI 300
           +RAY   Y  I  +M++ + H Y    A   ++IYT +HA  Y CT      RICI  +I
Sbjct: 1   MRAYVYSYARICMHMYI-HIHAY----ACMCIFIYTHMHACVYSCT------RICIHMYI 49


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,930,610
Number of Sequences: 237096
Number of extensions: 1162601
Number of successful extensions: 2672
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2670
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)