Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3504
         (756 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003193-1|AAH03193.1|  524|Homo sapiens leucine rich repeat con...    32   2.6  
AL513211-2|CAI17359.1|  154|Homo sapiens leucine rich repeat con...    32   2.6  
AL513211-1|CAI17358.1|  524|Homo sapiens leucine rich repeat con...    32   2.6  
AL033384-1|CAI21666.1|  524|Homo sapiens leucine rich repeat con...    32   2.6  
AK021896-1|BAB13929.1|  197|Homo sapiens protein ( Homo sapiens ...    32   2.6  
AF359380-1|AAK72246.1|  524|Homo sapiens LANO adaptor protein pr...    32   2.6  
AF332199-1|AAK69623.1|  524|Homo sapiens leucine-rich repeats pr...    32   2.6  

>BC003193-1|AAH03193.1|  524|Homo sapiens leucine rich repeat
           containing 1 protein.
          Length = 524

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/52 (36%), Positives = 31/52 (59%)
 Frame = -3

Query: 568 FIRLLQNISIRNHLPQIPLS*YVSFHSALVYVLFCQQHLTKA*KNFTQLQNV 413
           F++L++    RN +P+IP S  +SF  AL    F    LT+  ++F +LQN+
Sbjct: 81  FMQLVELDVSRNEIPEIPES--ISFCKALQVADFSGNPLTRLPESFPELQNL 130


>AL513211-2|CAI17359.1|  154|Homo sapiens leucine rich repeat
           containing 1 protein.
          Length = 154

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/52 (36%), Positives = 31/52 (59%)
 Frame = -3

Query: 568 FIRLLQNISIRNHLPQIPLS*YVSFHSALVYVLFCQQHLTKA*KNFTQLQNV 413
           F++L++    RN +P+IP S  +SF  AL    F    LT+  ++F +LQN+
Sbjct: 81  FMQLVELDVSRNEIPEIPES--ISFCKALQVADFSGNPLTRLPESFPELQNL 130


>AL513211-1|CAI17358.1|  524|Homo sapiens leucine rich repeat
           containing 1 protein.
          Length = 524

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/52 (36%), Positives = 31/52 (59%)
 Frame = -3

Query: 568 FIRLLQNISIRNHLPQIPLS*YVSFHSALVYVLFCQQHLTKA*KNFTQLQNV 413
           F++L++    RN +P+IP S  +SF  AL    F    LT+  ++F +LQN+
Sbjct: 81  FMQLVELDVSRNEIPEIPES--ISFCKALQVADFSGNPLTRLPESFPELQNL 130


>AL033384-1|CAI21666.1|  524|Homo sapiens leucine rich repeat
           containing 1 protein.
          Length = 524

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/52 (36%), Positives = 31/52 (59%)
 Frame = -3

Query: 568 FIRLLQNISIRNHLPQIPLS*YVSFHSALVYVLFCQQHLTKA*KNFTQLQNV 413
           F++L++    RN +P+IP S  +SF  AL    F    LT+  ++F +LQN+
Sbjct: 81  FMQLVELDVSRNEIPEIPES--ISFCKALQVADFSGNPLTRLPESFPELQNL 130


>AK021896-1|BAB13929.1|  197|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11834 fis, clone HEMBA1006583, weakly similar to
           Drosophila melanogaster Scribble (scrib) mRNA. ).
          Length = 197

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/52 (36%), Positives = 31/52 (59%)
 Frame = -3

Query: 568 FIRLLQNISIRNHLPQIPLS*YVSFHSALVYVLFCQQHLTKA*KNFTQLQNV 413
           F++L++    RN +P+IP S  +SF  AL    F    LT+  ++F +LQN+
Sbjct: 81  FMQLVELDVSRNEIPEIPES--ISFCKALQVADFSGNPLTRLPESFPELQNL 130


>AF359380-1|AAK72246.1|  524|Homo sapiens LANO adaptor protein
           protein.
          Length = 524

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/52 (36%), Positives = 31/52 (59%)
 Frame = -3

Query: 568 FIRLLQNISIRNHLPQIPLS*YVSFHSALVYVLFCQQHLTKA*KNFTQLQNV 413
           F++L++    RN +P+IP S  +SF  AL    F    LT+  ++F +LQN+
Sbjct: 81  FMQLVELDVSRNEIPEIPES--ISFCKALQVADFSGNPLTRLPESFPELQNL 130


>AF332199-1|AAK69623.1|  524|Homo sapiens leucine-rich repeats
           protein protein.
          Length = 524

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/52 (36%), Positives = 31/52 (59%)
 Frame = -3

Query: 568 FIRLLQNISIRNHLPQIPLS*YVSFHSALVYVLFCQQHLTKA*KNFTQLQNV 413
           F++L++    RN +P+IP S  +SF  AL    F    LT+  ++F +LQN+
Sbjct: 81  FMQLVELDVSRNEIPEIPES--ISFCKALQVADFSGNPLTRLPESFPELQNL 130


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,278,483
Number of Sequences: 237096
Number of extensions: 1740579
Number of successful extensions: 2523
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2523
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)