Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3502
         (742 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119520-1|AAM50174.1|  667|Drosophila melanogaster GH14596p pro...    29   5.0  
AF246991-1|AAF64300.1| 1640|Drosophila melanogaster unknown prot...    29   5.0  
AE014296-64|AAF47364.2| 1773|Drosophila melanogaster CG7020-PA p...    29   5.0  
AY113361-1|AAM29366.1|  700|Drosophila melanogaster LD22577p pro...    29   8.8  
AF193553-1|AAF25197.1|  700|Drosophila melanogaster ubiquitin-li...    29   8.8  
AE014296-1376|AAF50484.2|  700|Drosophila melanogaster CG7528-PA...    29   8.8  

>AY119520-1|AAM50174.1|  667|Drosophila melanogaster GH14596p
           protein.
          Length = 667

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +2

Query: 8   WLPHPSNRNTLL-LHGRNRQGGDTYPCGLTRGLTTSNYANYNFAGFIFITRC 160
           W+  P N N    ++G      D +   L  G T+  YA   + GF+  T C
Sbjct: 434 WVQAPHNANGYFTIYGDETDYNDHFNAKLVTGATSELYARTGYLGFLRRTEC 485


>AF246991-1|AAF64300.1| 1640|Drosophila melanogaster unknown protein.
          Length = 1640

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +2

Query: 8    WLPHPSNRNTLL-LHGRNRQGGDTYPCGLTRGLTTSNYANYNFAGFIFITRC 160
            W+  P N N    ++G      D +   L  G T+  YA   + GF+  T C
Sbjct: 1407 WVQAPHNANGYFTIYGDETDYNDHFNAKLVTGATSELYARTGYLGFLRRTEC 1458


>AE014296-64|AAF47364.2| 1773|Drosophila melanogaster CG7020-PA
            protein.
          Length = 1773

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +2

Query: 8    WLPHPSNRNTLL-LHGRNRQGGDTYPCGLTRGLTTSNYANYNFAGFIFITRC 160
            W+  P N N    ++G      D +   L  G T+  YA   + GF+  T C
Sbjct: 1540 WVQAPHNANGYFTIYGDETDYNDHFNAKLVTGATSELYARTGYLGFLRRTEC 1591


>AY113361-1|AAM29366.1|  700|Drosophila melanogaster LD22577p
           protein.
          Length = 700

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 517 RFFQILNFKWLSCKVAKISLKPNA 588
           R F++L  KW  CK     L+PNA
Sbjct: 415 RAFKVLEAKWEQCKAVYARLRPNA 438


>AF193553-1|AAF25197.1|  700|Drosophila melanogaster ubiquitin-like
           protein activatingenzyme protein.
          Length = 700

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 517 RFFQILNFKWLSCKVAKISLKPNA 588
           R F++L  KW  CK     L+PNA
Sbjct: 415 RAFKVLEAKWEQCKAVYARLRPNA 438


>AE014296-1376|AAF50484.2|  700|Drosophila melanogaster CG7528-PA
           protein.
          Length = 700

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 517 RFFQILNFKWLSCKVAKISLKPNA 588
           R F++L  KW  CK     L+PNA
Sbjct: 415 RAFKVLEAKWEQCKAVYARLRPNA 438


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,660,728
Number of Sequences: 53049
Number of extensions: 674215
Number of successful extensions: 1093
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)