Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3501
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT028798-1|ABI34179.1| 1567|Drosophila melanogaster LD03710p pro...    28   9.4  
AY052006-1|AAK93430.1| 1561|Drosophila melanogaster LD46954p pro...    28   9.4  
AE013599-2155|AAF58081.2| 1567|Drosophila melanogaster CG8370-PA...    28   9.4  

>BT028798-1|ABI34179.1| 1567|Drosophila melanogaster LD03710p protein.
          Length = 1567

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -3

Query: 486  APVPQIYCTALHYRNVIILHQMIEMLL*IEIAETLAVGGRRDNQPSP 346
            A +P+ YCT LH R+ + L++ +  L    +      G RR    SP
Sbjct: 875  AQLPEKYCTLLHVRSNLTLYEAV-WLQARAVQSQFRFGNRRPGAASP 920


>AY052006-1|AAK93430.1| 1561|Drosophila melanogaster LD46954p protein.
          Length = 1561

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -3

Query: 486  APVPQIYCTALHYRNVIILHQMIEMLL*IEIAETLAVGGRRDNQPSP 346
            A +P+ YCT LH R+ + L++ +  L    +      G RR    SP
Sbjct: 869  AQLPEKYCTLLHVRSNLTLYEAV-WLQARAVQSQFRFGNRRPGAASP 914


>AE013599-2155|AAF58081.2| 1567|Drosophila melanogaster CG8370-PA
            protein.
          Length = 1567

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -3

Query: 486  APVPQIYCTALHYRNVIILHQMIEMLL*IEIAETLAVGGRRDNQPSP 346
            A +P+ YCT LH R+ + L++ +  L    +      G RR    SP
Sbjct: 875  AQLPEKYCTLLHVRSNLTLYEAV-WLQARAVQSQFRFGNRRPGAASP 920


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,682,529
Number of Sequences: 53049
Number of extensions: 570126
Number of successful extensions: 1231
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)