Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3498
         (740 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016278-1|AAH16278.1|   94|Homo sapiens LOH3CR2A protein protein.     31   4.3  
AF086709-1|AAD45398.1|   94|Homo sapiens NAG-7 protein protein.        31   4.3  

>BC016278-1|AAH16278.1|   94|Homo sapiens LOH3CR2A protein protein.
          Length = 94

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = -3

Query: 609 HLSHTQYKRDKFLLWIIKLQNKFP*HIRSTMTLDETFDLFVRILIILLHVSQSPG 445
           HL +  + R  FL+W++   N +  H+R   TL    +   ++ ++LL V QSPG
Sbjct: 27  HLLNQPFSRGSFLIWLLLCWNSWY-HLR---TLRRQANQANKLSMMLLRVKQSPG 77


>AF086709-1|AAD45398.1|   94|Homo sapiens NAG-7 protein protein.
          Length = 94

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = -3

Query: 609 HLSHTQYKRDKFLLWIIKLQNKFP*HIRSTMTLDETFDLFVRILIILLHVSQSPG 445
           HL +  + R  FL+W++   N +  H+R   TL    +   ++ ++LL V QSPG
Sbjct: 27  HLLNQPFSRGSFLIWLLLCWNSWY-HLR---TLRRQANQANKLSMMLLRVKQSPG 77


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,662,764
Number of Sequences: 237096
Number of extensions: 2270189
Number of successful extensions: 3473
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3473
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)