Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3497
(690 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0387 + 24869594-24871480 31 1.1
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 29 3.5
06_01_0356 + 2557127-2557193,2557272-2557315,2557433-2557528,255... 29 3.5
03_01_0148 + 1174097-1174289,1174539-1174672,1174760-1175098 29 3.5
04_04_1475 + 33856351-33856582,33857614-33857781,33858156-338582... 29 4.6
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 29 4.6
08_01_0423 + 3740344-3740408,3740949-3741015,3742110-3742218,374... 28 6.1
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 28 6.1
01_02_0053 + 10673264-10674510,10674552-10674576,10674802-106748... 28 6.1
11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363 28 8.0
10_08_0645 - 19562886-19564484 28 8.0
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 28 8.0
04_04_0090 - 22747049-22747282,22747438-22747847,22748562-227487... 28 8.0
04_04_0078 + 22573413-22573554,22573637-22573959,22574681-225753... 28 8.0
01_01_0272 - 2249662-2249721,2250110-2250335,2250419-2250615,225... 28 8.0
>04_04_0387 + 24869594-24871480
Length = 628
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -2
Query: 689 EEMLDEEEGDDSQFKDEDNEEGEPKGKKAK 600
+E ++E+ Q +DED ++ P+G+ AK
Sbjct: 558 QEQTEDEDEQQEQIEDEDEQQESPRGRSAK 587
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 689 EEMLDEEEGDDSQFKDEDNEEGEPKGKKAKMS 594
EE DEE+ DD +D G+ +GK+ ++S
Sbjct: 337 EEYSDEEDSDDEGTEDMGGGGGDERGKRKRLS 368
>06_01_0356 +
2557127-2557193,2557272-2557315,2557433-2557528,
2559259-2559351,2559450-2559540,2559617-2559678,
2559754-2559938,2560022-2560199,2560293-2560336,
2560440-2560635,2560728-2560745,2560955-2561005
Length = 374
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2
Query: 677 DEEEGDDSQFKDEDNEEGEPKGKK 606
DEEE ++ + +DED+EE + K KK
Sbjct: 328 DEEEEEEDEDEDEDDEEEKSKPKK 351
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 689 EEMLDEEEGDDSQFKDEDNEEGEPKGKKA 603
+E +EEE D+ + +D++ E+ +PK K A
Sbjct: 326 DEDEEEEEEDEDEDEDDEEEKSKPKKKSA 354
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 677 DEEEGDDSQFKDEDNEEGEPKGKKAKMS 594
DE+E ++ + +DED ++ E K K K S
Sbjct: 326 DEDEEEEEEDEDEDEDDEEEKSKPKKKS 353
>03_01_0148 + 1174097-1174289,1174539-1174672,1174760-1175098
Length = 221
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 677 DEEEGDDSQFKDEDNEEGEPKGKKAKMS 594
DEE+ DD + +DED E+G + +K S
Sbjct: 51 DEEDDDDDEDEDEDGEQGAIGNEGSKQS 78
>04_04_1475 +
33856351-33856582,33857614-33857781,33858156-33858261,
33858391-33858442,33858525-33858642,33858736-33858766,
33858962-33858985,33859075-33859199,33860087-33860168,
33860319-33860441,33860539-33860592,33860669-33860738,
33861276-33861309,33861824-33862170
Length = 521
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 689 EEMLDEEEGDDSQFKDEDNEEGEPKGKKAK 600
+++ + EE DD + +D+E GE KG K +
Sbjct: 434 KDVSESEEDDDEEDDSDDDENGEIKGGKGR 463
>03_02_0924 +
12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -2
Query: 689 EEMLDEE-EGDDSQFKDEDNEEG-EPKGKKAKMS 594
EE DEE E D+ +ED E+G EPK +K K S
Sbjct: 79 EEYSDEEGEDDEDDEGEEDEEDGSEPKRRKEKGS 112
>08_01_0423 +
3740344-3740408,3740949-3741015,3742110-3742218,
3742320-3742447,3742899-3743324
Length = 264
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 677 DEEEGDDSQFKDEDNEEGEPKGK 609
+EEE D+ +DED EEG+ G+
Sbjct: 224 EEEEEDNDDDEDEDEEEGQEDGE 246
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -2
Query: 677 DEEEGDDSQFKDEDNEEGEPKGKKAK 600
+EEE ++ K E+N+E PK KKA+
Sbjct: 236 EEEEVSEADKKVEENKEETPKNKKAR 261
>01_02_0053 +
10673264-10674510,10674552-10674576,10674802-10674886,
10675074-10675084
Length = 455
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2
Query: 674 EEEGDDSQFKDEDNEEGE 621
EEEG D +D+D+EEGE
Sbjct: 397 EEEGTDESDEDDDSEEGE 414
>11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363
Length = 394
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 689 EEMLDEEEGDDSQFKDEDNEEGE 621
E+ DE+E DD + +DED +E E
Sbjct: 371 EDNEDEDEDDDDEDEDEDEDEDE 393
>10_08_0645 - 19562886-19564484
Length = 532
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 499 GDGTTSPKWVSRRFVH 546
GDG SPKW S F H
Sbjct: 186 GDGAPSPKWTSAPFTH 201
>08_02_1277 +
25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -2
Query: 689 EEMLDEEEGDDSQFKDEDNEEGEPKG 612
EE +D+++ DDS D+D+++ + G
Sbjct: 279 EEQVDDDDNDDSDDDDDDDDDDDDDG 304
>04_04_0090 -
22747049-22747282,22747438-22747847,22748562-22748757,
22749511-22749583,22749673-22749753,22749855-22749940,
22750050-22750126,22750313-22750409,22751025-22752020,
22752882-22752926
Length = 764
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 434 SYN*LGWSHPRLHNLDIIIPKMATVRLAQNGSPG-GLFISWHSSWAMQLCLWHYSTFSLF 610
S+ LGW P +I + + A N S G GL S+ LC + Y TF+ +
Sbjct: 590 SWGPLGWVIPG----EIFPVDIRSAGQAMNVSIGLGLTFVQTQSFLAMLCRFRYGTFAYY 645
Query: 611 CPWVHLL 631
WV ++
Sbjct: 646 AAWVAVM 652
>04_04_0078 +
22573413-22573554,22573637-22573959,22574681-22575313,
22575383-22575838
Length = 517
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 434 SYN*LGWSHPRLHNLDIIIPKMATVRLAQNGSPG-GLFISWHSSWAMQLCLWHYSTFSLF 610
S+ LGW P +I + + A N S G GL S+ LC + Y TF+ +
Sbjct: 407 SWGPLGWVIPG----EIFPVDIRSAGQAMNVSIGLGLTFVQTQSFLAMLCRFRYGTFAYY 462
Query: 611 CPWVHLL 631
WV ++
Sbjct: 463 AAWVAVM 469
>01_01_0272 -
2249662-2249721,2250110-2250335,2250419-2250615,
2250707-2250955,2251047-2251176,2251473-2251564,
2251735-2251855,2251940-2252028,2252149-2252271,
2252379-2252506,2253039-2253147,2253701-2254000
Length = 607
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 677 DEEEGDDSQFKDEDNEEGEPKGKKAKMS 594
D EE + D+D E EP GK+ ++S
Sbjct: 50 DAEEEGSGEVDDDDGEAAEPSGKEEEVS 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,661,066
Number of Sequences: 37544
Number of extensions: 294351
Number of successful extensions: 1226
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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