Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3497
         (690 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK057442-1|BAB71488.1|  556|Homo sapiens protein ( Homo sapiens ...    31   3.9  
BC032639-1|AAH32639.1| 1220|Homo sapiens eukaryotic translation ...    31   5.1  
AL133563-1|CAB63717.1| 1132|Homo sapiens hypothetical protein pr...    31   5.1  
AJ006776-1|CAB44357.1| 1220|Homo sapiens IF2 protein protein.          31   5.1  
AC018690-1|AAY24313.1|  728|Homo sapiens unknown protein.              31   5.1  
AB018284-1|BAA34461.2| 1222|Homo sapiens KIAA0741 protein protein.     31   5.1  
BC018670-1|AAH18670.1|  658|Homo sapiens Unknown (protein for IM...    30   6.8  
BC003380-1|AAH03380.1|  268|Homo sapiens acidic (leucine-rich) n...    30   6.8  
AY057381-1|AAL25814.1|  266|Homo sapiens lecuine-rich acidic pro...    30   6.8  
AL138795-4|CAI22808.1|  268|Homo sapiens acidic (leucine-rich) n...    30   6.8  
AL138795-3|CAI22809.1|  136|Homo sapiens acidic (leucine-rich) n...    30   6.8  
AL138795-1|CAI22806.1|  220|Homo sapiens acidic (leucine-rich) n...    30   6.8  
AK223469-1|BAD97189.1|  266|Homo sapiens acidic (leucine-rich) n...    30   6.8  
AK095228-1|BAC04505.1|  218|Homo sapiens protein ( Homo sapiens ...    30   6.8  
AK092672-1|BAC03942.1|  268|Homo sapiens  mRNA.  protein.              30   6.8  
L21693-1|AAB08706.1|  110|Homo sapiens prothymosin alpha protein.      30   8.9  
J04802-1|AAA63242.1|  110|Homo sapiens protein ( Human prothymos...    30   8.9  
AL354830-1|CAH71127.1|  110|Homo sapiens protein ( Human DNA seq...    30   8.9  

>AK057442-1|BAB71488.1|  556|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32880 fis, clone TESTI2004122. ).
          Length = 556

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = -3

Query: 667 KEMILSSRMKIMKKVNPRAKKRKCRIMPKAKLHRPRRMPRNEQTAWRP 524
           +E +LS   K+ ++  PR K R  R M     H P+R PR E T  +P
Sbjct: 496 EEQLLSEAGKVDREGTPR-KPRSHRSMGVRMEHSPQRPPRTEPTGSQP 542


>BC032639-1|AAH32639.1| 1220|Homo sapiens eukaryotic translation
           initiation factor 5B protein.
          Length = 1220

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -2

Query: 689 EEMLDEEEGDDSQFKDEDNEEGEPKGKK 606
           EE  +EEE +D + ++E+ EEGE +G +
Sbjct: 534 EEEEEEEEEEDEESEEEEEEEGESEGSE 561


>AL133563-1|CAB63717.1| 1132|Homo sapiens hypothetical protein
           protein.
          Length = 1132

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -2

Query: 689 EEMLDEEEGDDSQFKDEDNEEGEPKGKK 606
           EE  +EEE +D + ++E+ EEGE +G +
Sbjct: 446 EEEEEEEEEEDEESEEEEEEEGESEGSE 473


>AJ006776-1|CAB44357.1| 1220|Homo sapiens IF2 protein protein.
          Length = 1220

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -2

Query: 689 EEMLDEEEGDDSQFKDEDNEEGEPKGKK 606
           EE  +EEE +D + ++E+ EEGE +G +
Sbjct: 534 EEEEEEEEEEDEESEEEEEEEGESEGSE 561


>AC018690-1|AAY24313.1|  728|Homo sapiens unknown protein.
          Length = 728

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -2

Query: 689 EEMLDEEEGDDSQFKDEDNEEGEPKGKK 606
           EE  +EEE +D + ++E+ EEGE +G +
Sbjct: 42  EEEEEEEEEEDEESEEEEEEEGESEGSE 69


>AB018284-1|BAA34461.2| 1222|Homo sapiens KIAA0741 protein protein.
          Length = 1222

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -2

Query: 689 EEMLDEEEGDDSQFKDEDNEEGEPKGKK 606
           EE  +EEE +D + ++E+ EEGE +G +
Sbjct: 536 EEEEEEEEEEDEESEEEEEEEGESEGSE 563


>BC018670-1|AAH18670.1|  658|Homo sapiens Unknown (protein for
           IMAGE:4104653) protein.
          Length = 658

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 689 EEMLDEEEGDDSQFKDEDNEEGEPKGKKAK 600
           E+  +EEE ++ +  DE  E+GE + KK K
Sbjct: 625 EDGFEEEEEEEEEMTDESEEDGEEQKKKKK 654


>BC003380-1|AAH03380.1|  268|Homo sapiens acidic (leucine-rich)
           nuclear phosphoprotein 32 family, member E protein.
          Length = 268

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 677 DEEEGDDSQFKDEDNEEGEPKG 612
           D+E+GD+   ++E+NE G P+G
Sbjct: 162 DDEDGDEDDEEEEENEAGPPEG 183


>AY057381-1|AAL25814.1|  266|Homo sapiens lecuine-rich acidic
           protein-like protein protein.
          Length = 266

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 677 DEEEGDDSQFKDEDNEEGEPKG 612
           D+E+GD+   ++E+NE G P+G
Sbjct: 162 DDEDGDEDDEEEEENEAGPPEG 183


>AL138795-4|CAI22808.1|  268|Homo sapiens acidic (leucine-rich)
           nuclear phosphoprotein 32 family, member E protein.
          Length = 268

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 677 DEEEGDDSQFKDEDNEEGEPKG 612
           D+E+GD+   ++E+NE G P+G
Sbjct: 162 DDEDGDEDDEEEEENEAGPPEG 183


>AL138795-3|CAI22809.1|  136|Homo sapiens acidic (leucine-rich)
           nuclear phosphoprotein 32 family, member E protein.
          Length = 136

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 677 DEEEGDDSQFKDEDNEEGEPKG 612
           D+E+GD+   ++E+NE G P+G
Sbjct: 30  DDEDGDEDDEEEEENEAGPPEG 51


>AL138795-1|CAI22806.1|  220|Homo sapiens acidic (leucine-rich)
           nuclear phosphoprotein 32 family, member E protein.
          Length = 220

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 677 DEEEGDDSQFKDEDNEEGEPKG 612
           D+E+GD+   ++E+NE G P+G
Sbjct: 114 DDEDGDEDDEEEEENEAGPPEG 135


>AK223469-1|BAD97189.1|  266|Homo sapiens acidic (leucine-rich)
           nuclear phosphoprotein 32 family, member E variant
           protein.
          Length = 266

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 677 DEEEGDDSQFKDEDNEEGEPKG 612
           D+E+GD+   ++E+NE G P+G
Sbjct: 162 DDEDGDEDDEEEEENEAGPPEG 183


>AK095228-1|BAC04505.1|  218|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37909 fis, clone CTONG1000022, highly similar to
           Mus musculus cerebellar postnatal development protein-1
           (Cpd1) ).
          Length = 218

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 677 DEEEGDDSQFKDEDNEEGEPKG 612
           D+E+GD+   ++E+NE G P+G
Sbjct: 114 DDEDGDEDDEEEEENEAGPPEG 135


>AK092672-1|BAC03942.1|  268|Homo sapiens  mRNA.  protein.
          Length = 268

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -2

Query: 677 DEEEGDDSQFKDEDNEEGEPKG 612
           D+E+GD+   ++E+NE G P+G
Sbjct: 162 DDEDGDEDDEEEEENEAGPPEG 183


>L21693-1|AAB08706.1|  110|Homo sapiens prothymosin alpha protein.
          Length = 110

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 689 EEMLDEEEGD-DSQFKDEDNEEGEPKGKKA 603
           EE  +EEEGD + +  DED E   P GK+A
Sbjct: 61  EEEEEEEEGDGEEEDGDEDEEAESPTGKRA 90


>J04802-1|AAA63242.1|  110|Homo sapiens protein ( Human
           prothymosin-alpha pseudogene, complete sequence. ).
          Length = 110

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 689 EEMLDEEEGD-DSQFKDEDNEEGEPKGKKA 603
           EE  +EEEGD + +  DED E   P GK+A
Sbjct: 61  EEEEEEEEGDGEEEDGDEDQEAQSPTGKRA 90


>AL354830-1|CAH71127.1|  110|Homo sapiens protein ( Human DNA
           sequence from clone RP11-193G17 on chromosome 13
           Contains the gene for a novel protein similar to
           prothymosin.  ).
          Length = 110

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 689 EEMLDEEEGD-DSQFKDEDNEEGEPKGKKA 603
           EE  +EEEGD + +  DED E   P GK+A
Sbjct: 61  EEEEEEEEGDGEEEDGDEDEEAESPTGKRA 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,369,313
Number of Sequences: 237096
Number of extensions: 1665586
Number of successful extensions: 6694
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6335
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)