Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3492
(555 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 72 2e-13
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 72 2e-13
U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical pr... 57 7e-09
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ... 51 6e-07
U42848-7|AAA83612.2| 567|Caenorhabditis elegans Hypothetical pr... 28 3.9
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 27 9.1
AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 72.1 bits (169), Expect = 2e-13
Identities = 47/181 (25%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Frame = +3
Query: 9 TPVSQEIAMTWSNFIKTLTHLNELRIPRQIRGS-NTQFIELHIFTDASQNAYGACAYIRT 185
T + ++ W IK + +++ +PRQ+ + + + + +F+DAS++ Y Y++
Sbjct: 1398 TKIPGKLLTAWKK-IKEMYRDDKITVPRQLTNDYDYESVNILVFSDASKDIYATTIYLQY 1456
Query: 186 YNLNTEITVRLLCAKSRVAPLK--TISIPRLELCGALLGARLYKKIINSLKLSFTNTCFW 359
+ ++LL +K+++ P T++IP++EL +GA L L+L F+
Sbjct: 1457 QYKDKPPVIQLLTSKNKIKPANCNTLTIPKMELLAINIGANLAYSTSEQLRLDVAEVIFF 1516
Query: 360 TDSTIVMGWIRMSPHLLKTFVQNRVTELNELTG-------DSVWLHVNSKNNPADLLSSR 518
TDS+ WI +S + +V NRV + ++ S + H +K+NPAD +++R
Sbjct: 1517 TDSSCASYWI-LSNKTTRQWVSNRVETIYQVKEKFATDGITSSFRHCPTKDNPAD-IATR 1574
Query: 519 G 521
G
Sbjct: 1575 G 1575
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 72.1 bits (169), Expect = 2e-13
Identities = 47/181 (25%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Frame = +3
Query: 9 TPVSQEIAMTWSNFIKTLTHLNELRIPRQIRGS-NTQFIELHIFTDASQNAYGACAYIRT 185
T + ++ W IK + +++ +PRQ+ + + + + +F+DAS++ Y Y++
Sbjct: 1398 TKIPGKLLTAWKK-IKEMYRDDKITVPRQLTNDYDYESVNILVFSDASKDIYATTIYLQY 1456
Query: 186 YNLNTEITVRLLCAKSRVAPLK--TISIPRLELCGALLGARLYKKIINSLKLSFTNTCFW 359
+ ++LL +K+++ P T++IP++EL +GA L L+L F+
Sbjct: 1457 QYKDKPPVIQLLTSKNKIKPANCNTLTIPKMELLAINIGANLAYSTSEQLRLDVAEVIFF 1516
Query: 360 TDSTIVMGWIRMSPHLLKTFVQNRVTELNELTG-------DSVWLHVNSKNNPADLLSSR 518
TDS+ WI +S + +V NRV + ++ S + H +K+NPAD +++R
Sbjct: 1517 TDSSCASYWI-LSNKTTRQWVSNRVETIYQVKEKFATDGITSSFRHCPTKDNPAD-IATR 1574
Query: 519 G 521
G
Sbjct: 1575 G 1575
>U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical protein
K06C4.15 protein.
Length = 1067
Score = 57.2 bits (132), Expect = 7e-09
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Frame = +3
Query: 78 LRIPRQIRGS-NTQFIELHIFTDASQNAYGACAYIR-TYNLNTEITVRLLCAKSRVAPLK 251
+ +PR++ + I+L IF+DASQ+ Y A AY +Y + + L+ +K+++ P K
Sbjct: 962 ITVPRRLTTDFEYKEIQLLIFSDASQDIYAAAAYAYFSYGDDRPPVISLITSKNKIKPSK 1021
Query: 252 TIS--IPRLELCGALLGARLYKKIINSLKLSFTNTCFWTDSTIVM 380
+ IP+LEL G +G+ L I+ L TN +TDS+ +
Sbjct: 1022 ETNWTIPKLELLGIEIGSNLASSIVKELSCKVTNIRLFTDSSCAL 1066
>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
protein ZC132.5 protein.
Length = 1277
Score = 50.8 bits (116), Expect = 6e-07
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Frame = +3
Query: 123 ELHIFTDASQNAYGACAYIRTYNLNTEITVRLLCAKSRVAPLK-TISIPRLELCGALLGA 299
E+ F DASQ A AC Y++ + V LL KS V LK +IP+LE+ +
Sbjct: 511 EIIAFADASQEAIAACIYVK-----NKYGVNLLFGKSNVKSLKEKWTIPKLEVQALKVAT 565
Query: 300 RLYKKIINSLK---LSFTNTCFWTDSTIVMGWIRMSPHLLKT--FVQNRVTEL---NEL- 452
+ +L+ + T ++DS I + W+R P + ++NR+ + NE
Sbjct: 566 DRALSTLTALQDGDIKVTKVILFSDSEITLAWLRSEPGKKEVGILIKNRIESIRKTNETM 625
Query: 453 --TGDSVWL-HVNSKNNPADLLSSRGGP 527
G V+ +VN+ NPAD L +RG P
Sbjct: 626 LQKGVQVFFGYVNTLENPAD-LRTRGLP 652
>U42848-7|AAA83612.2| 567|Caenorhabditis elegans Hypothetical
protein C31H1.8 protein.
Length = 567
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 42 SNFIKTLTHLNELRIPRQIRGSNTQFIELHIFTDASQNAYGACAYIRT-YNLNTEITVRL 218
S+++ + H ++ R++RG+ F+E+ ++ +Y + I + + N I V+
Sbjct: 243 SDYVYAIVHSRNEKLERRLRGAIDSFMEIESKIRQARISYVSSFTINSPHTPNVSIIVKF 302
Query: 219 LCAKSRVAPLKT 254
C K + KT
Sbjct: 303 CCLKPCNSDAKT 314
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +3
Query: 66 HLNELRIPRQIRGSNTQFIELHIFTDASQNAYGACAYIRTYNLNTEITVRLLCAK 230
++N R + G T+ + H F D + C Y + + N E+ LCAK
Sbjct: 284 NVNNRRKALIMAGRCTRCLGRHSFKDCRSAKFNVCMYCKDEDPNVELHNYGLCAK 338
>AC084161-1|ABD63205.1| 1375|Caenorhabditis elegans Hypothetical
protein Y92H12A.5 protein.
Length = 1375
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 353 FLDGFDYRNGLDTHVTSFI 409
+++GFDY+N HV SF+
Sbjct: 1002 WIEGFDYQNSRQNHVHSFL 1020
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,870,379
Number of Sequences: 27780
Number of extensions: 253829
Number of successful extensions: 552
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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