Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3491
         (746 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical p...    29   3.5  
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF099920-9|AAK29849.1| 1222|Caenorhabditis elegans Transbilayer ...    28   6.1  
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    28   8.1  

>Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical
           protein F14F8.12 protein.
          Length = 329

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +2

Query: 149 LVLFFLLFYVITVINSTVHVIL 214
           ++LF +LFY++ ++  T HVIL
Sbjct: 76  ILLFIILFYILHILQQTFHVIL 97


>Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical
           protein F14F8.13 protein.
          Length = 328

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 158 FFLLFYVITVINSTVHVIL 214
           FF++FY++ V+  T HVIL
Sbjct: 106 FFIIFYILHVLQQTFHVIL 124


>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
           protein K09H11.3 protein.
          Length = 1085

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 126 LLIINGGMF*SMVSDLRNRPHVSRWVKLHEPQEPHLTPR 10
           +L++NG M     S L+  P V   +K   PQ P  TP+
Sbjct: 632 MLVLNGSMAVESTSMLKAEPLVMDSLKEESPQSPQKTPK 670


>AF099920-9|AAK29849.1| 1222|Caenorhabditis elegans Transbilayer
           amphipath transporters(subfamily iv p-type atpase)
           protein 2, isoform a protein.
          Length = 1222

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -2

Query: 139 IAKRFINN*RRYVLKHGFGFEKSTSCLKVGQTSRTSGTPF--NTTW 8
           I+ R +N  + YV+++G   E+  S +KVG   R     F  NT W
Sbjct: 112 ISDRNVNGRKSYVVRNGSLCEEDWSNVKVGDVIRMMSNQFVANTRW 157


>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
            mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 145  YPGTFLPIILRNNSNK*HGPRDIIKWAP 228
            YPG FLP+ILR+ +     P D  K AP
Sbjct: 3318 YPGNFLPLILRHGAK----PTDTPKQAP 3341


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,306,396
Number of Sequences: 27780
Number of extensions: 356376
Number of successful extensions: 743
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)