Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3487
(405 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81033-2|CAB02725.1| 263|Caenorhabditis elegans Hypothetical pr... 43 7e-05
AJ011777-1|CAA09770.1| 263|Caenorhabditis elegans FOG-3 protein... 43 7e-05
U97405-3|AAB53008.1| 192|Caenorhabditis elegans Hypothetical pr... 31 0.31
U40798-2|AAQ01525.2| 389|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z81067-4|CAB02976.2| 632|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 28 2.9
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 28 2.9
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z54327-3|CAD36481.1| 596|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z54327-2|CAA91123.1| 658|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF480493-1|AAL84283.1| 596|Caenorhabditis elegans EFF-1B precur... 27 5.1
AF480492-1|AAL84282.1| 658|Caenorhabditis elegans EFF-1A precur... 27 5.1
Z54327-10|CAH04696.1| 596|Caenorhabditis elegans Hypothetical p... 27 6.8
U53332-5|AAK31535.2| 821|Caenorhabditis elegans Related to yeas... 26 9.0
DQ178636-1|ABD75715.1| 826|Caenorhabditis elegans vacuolar prot... 26 9.0
>Z81033-2|CAB02725.1| 263|Caenorhabditis elegans Hypothetical
protein C03C11.2 protein.
Length = 263
Score = 43.2 bits (97), Expect = 7e-05
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = +2
Query: 92 MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHW 223
M+ EV+ +NFV YL+ +PRR V IFG EL L F W
Sbjct: 1 MYTEVRELVNFVCRYLFGHIPRRPVGIFGAELGNYLVSHFSSTW 44
>AJ011777-1|CAA09770.1| 263|Caenorhabditis elegans FOG-3 protein
protein.
Length = 263
Score = 43.2 bits (97), Expect = 7e-05
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = +2
Query: 92 MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHW 223
M+ EV+ +NFV YL+ +PRR V IFG EL L F W
Sbjct: 1 MYTEVRELVNFVCRYLFGHIPRRPVGIFGAELGNYLVSHFSSTW 44
>U97405-3|AAB53008.1| 192|Caenorhabditis elegans Hypothetical
protein T09B4.6 protein.
Length = 192
Score = 31.1 bits (67), Expect = 0.31
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 92 MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKD 205
M +EVQ A+ F+ ++++ ++PR RV F L L +
Sbjct: 1 MILEVQEAVQFLSTFMFGRIPRSRVKSFCGHLSSLLSE 38
>U40798-2|AAQ01525.2| 389|Caenorhabditis elegans Hypothetical
protein R13A1.9 protein.
Length = 389
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 71 CSLVLPKMHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHW 223
C+ ++ +MHI + A +F + + K+ +N FGE+ D F G+W
Sbjct: 188 CNSIVWRMHIPLIPATSFFLYLGWMKVAEALLNPFGED-----DDDFEGNW 233
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 376 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 412
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 145 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 181
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 143 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 179
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 201 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 237
>Z81067-4|CAB02976.2| 632|Caenorhabditis elegans Hypothetical
protein F23A7.5 protein.
Length = 632
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 141 TISCQDGESTSSGKN*RRHSRTNSGVIGTRHRPCR 245
+I + +S S ++ RRHSR+ SG G+R R R
Sbjct: 577 SIEKRRSQSRSRSRDSRRHSRSRSGSRGSRRRSDR 611
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 376 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 412
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 145 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 181
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 143 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 179
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 17 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 127
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 201 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 237
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 27.5 bits (58), Expect = 3.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 293 HWIQWASSFQASERRAPARSVPGTND 216
HWI W+++F + R A ++P T D
Sbjct: 1526 HWILWSNTFANNSRSGIAVALPDTYD 1551
>Z54327-3|CAD36481.1| 596|Caenorhabditis elegans Hypothetical
protein C26D10.5b protein.
Length = 596
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -2
Query: 326 GHSRL--PRRSFKHWIQWASSFQASERRAPARSVPGTN 219
GH L P K WIQ A F +S R+A GTN
Sbjct: 348 GHFNLTRPLEVIKPWIQSARIFDSSLRQAVVTHAEGTN 385
>Z54327-2|CAA91123.1| 658|Caenorhabditis elegans Hypothetical
protein C26D10.5a protein.
Length = 658
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -2
Query: 326 GHSRL--PRRSFKHWIQWASSFQASERRAPARSVPGTN 219
GH L P K WIQ A F +S R+A GTN
Sbjct: 348 GHFNLTRPLEVIKPWIQSARIFDSSLRQAVVTHAEGTN 385
>AF480493-1|AAL84283.1| 596|Caenorhabditis elegans EFF-1B precursor
protein.
Length = 596
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -2
Query: 326 GHSRL--PRRSFKHWIQWASSFQASERRAPARSVPGTN 219
GH L P K WIQ A F +S R+A GTN
Sbjct: 348 GHFNLTRPLEVIKPWIQSARIFDSSLRQAVVTHAEGTN 385
>AF480492-1|AAL84282.1| 658|Caenorhabditis elegans EFF-1A precursor
protein.
Length = 658
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -2
Query: 326 GHSRL--PRRSFKHWIQWASSFQASERRAPARSVPGTN 219
GH L P K WIQ A F +S R+A GTN
Sbjct: 348 GHFNLTRPLEVIKPWIQSARIFDSSLRQAVVTHAEGTN 385
>Z54327-10|CAH04696.1| 596|Caenorhabditis elegans Hypothetical
protein C26D10.7 protein.
Length = 596
Score = 26.6 bits (56), Expect = 6.8
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -2
Query: 323 HSRL--PRRSFKHWIQWASSFQASERRAPARSVPGTN 219
H RL P K WIQ A F +S R+A GTN
Sbjct: 349 HFRLTRPLEVIKPWIQSARIFDSSLRQAVVTHAEGTN 385
>U53332-5|AAK31535.2| 821|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 35 protein.
Length = 821
Score = 26.2 bits (55), Expect = 9.0
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = -3
Query: 232 CRVPMTPEFVLECLL*FFPED 170
CR P++ E+++EC++ F +D
Sbjct: 269 CRDPISQEYLMECVIQVFADD 289
>DQ178636-1|ABD75715.1| 826|Caenorhabditis elegans vacuolar protein
sorting factor protein.
Length = 826
Score = 26.2 bits (55), Expect = 9.0
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = -3
Query: 232 CRVPMTPEFVLECLL*FFPED 170
CR P++ E+++EC++ F +D
Sbjct: 274 CRDPISQEYLMECVIQVFADD 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,399,426
Number of Sequences: 27780
Number of extensions: 223433
Number of successful extensions: 513
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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