Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3475
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 173 9e-44
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 173 9e-44
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 173 9e-44
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 173 9e-44
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 163 1e-40
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 151 3e-37
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 58 7e-09
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 57 9e-09
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 57 9e-09
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 55 4e-08
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 55 4e-08
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 55 4e-08
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 55 4e-08
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 53 2e-07
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 53 2e-07
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 46 2e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 45 4e-05
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 44 7e-05
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 44 7e-05
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 44 7e-05
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 44 7e-05
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 44 7e-05
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 44 7e-05
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 44 7e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 44 1e-04
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 44 1e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 43 2e-04
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 42 5e-04
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 41 9e-04
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 38 0.005
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 38 0.006
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 38 0.006
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 38 0.006
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 38 0.006
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 38 0.006
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 37 0.011
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 37 0.011
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 37 0.011
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 37 0.014
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 36 0.018
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 36 0.018
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 36 0.018
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 36 0.032
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 36 0.032
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 36 0.032
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 35 0.056
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 35 0.056
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 34 0.075
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 34 0.099
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 34 0.099
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 34 0.099
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 33 0.23
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 33 0.23
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 33 0.23
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 33 0.23
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 33 0.23
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 33 0.23
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 33 0.23
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 33 0.23
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 32 0.30
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 32 0.30
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.40
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 32 0.40
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.40
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.40
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 32 0.40
AF077546-4|AAC26317.2| 704|Caenorhabditis elegans Hypothetical ... 31 0.70
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.92
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 31 0.92
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 31 0.92
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 31 0.92
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 3.7
U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un... 29 3.7
U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un... 29 3.7
U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. 29 3.7
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 3.7
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 29 3.7
AF022977-3|AAB88609.1| 554|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81146-3|CAB03524.1| 496|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81142-8|CAO82053.1| 370|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 28 6.5
AC024859-7|AAK29968.1| 550|Caenorhabditis elegans Hypothetical ... 28 6.5
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (... 28 6.5
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ... 28 6.5
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 27 8.6
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 27 8.6
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 27 8.6
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 27 8.6
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 27 8.6
AF000194-1|AAK39376.4| 386|Caenorhabditis elegans Hypothetical ... 27 8.6
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 27 8.6
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 27 8.6
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 173 bits (421), Expect = 9e-44
Identities = 92/203 (45%), Positives = 121/203 (59%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
D T KSKGYGFVSY K+ EAE AI MNGQWLG R+IRTNWATRKP + + +
Sbjct: 56 DTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKS 115
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIRFSTKES 362
+DE+YNQ+S N +VY G + + LTE+ +++ F FG I E+R+FK +GYAF++F K++
Sbjct: 116 YDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDA 174
Query: 363 ATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPFGTAYTASGVPPASY 542
A AIV ++N D+ GQ V+CSWGK G G T +G Y S S
Sbjct: 175 AAKAIVQMNNQDVGGQLVRCSWGK----------TGDTGKTPGGSYGYGYGNSSSGGNSQ 224
Query: 543 WYNTYPQQIGGFLXGGPRRAGVH 611
Y+ Y GG GG + G H
Sbjct: 225 PYSGYG---GGGAYGGGQGGGGH 244
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Frame = +3
Query: 225 VYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD------KGYAFIRFSTKESATHAIVAV 386
V+ G L++ + + +++ FQPFG + + +V +D KGY F+ + +E A AI +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 387 HNTDINGQPVKCSWG-KESGD 446
+ + + ++ +W ++ GD
Sbjct: 84 NGQWLGRRTIRTNWATRKPGD 104
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 173 bits (421), Expect = 9e-44
Identities = 92/203 (45%), Positives = 121/203 (59%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
D T KSKGYGFVSY K+ EAE AI MNGQWLG R+IRTNWATRKP + + +
Sbjct: 66 DTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKS 125
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIRFSTKES 362
+DE+YNQ+S N +VY G + + LTE+ +++ F FG I E+R+FK +GYAF++F K++
Sbjct: 126 YDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDA 184
Query: 363 ATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPFGTAYTASGVPPASY 542
A AIV ++N D+ GQ V+CSWGK G G T +G Y S S
Sbjct: 185 AAKAIVQMNNQDVGGQLVRCSWGK----------TGDTGKTPGGSYGYGYGNSSSGGNSQ 234
Query: 543 WYNTYPQQIGGFLXGGPRRAGVH 611
Y+ Y GG GG + G H
Sbjct: 235 PYSGYG---GGGAYGGGQGGGGH 254
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Frame = +3
Query: 225 VYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD------KGYAFIRFSTKESATHAIVAV 386
V+ G L++ + + +++ FQPFG + + +V +D KGY F+ + +E A AI +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 387 HNTDINGQPVKCSWG-KESGD 446
+ + + ++ +W ++ GD
Sbjct: 94 NGQWLGRRTIRTNWATRKPGD 114
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 173 bits (421), Expect = 9e-44
Identities = 92/203 (45%), Positives = 121/203 (59%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
D T KSKGYGFVSY K+ EAE AI MNGQWLG R+IRTNWATRKP + + +
Sbjct: 169 DTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKS 228
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIRFSTKES 362
+DE+YNQ+S N +VY G + + LTE+ +++ F FG I E+R+FK +GYAF++F K++
Sbjct: 229 YDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDA 287
Query: 363 ATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPFGTAYTASGVPPASY 542
A AIV ++N D+ GQ V+CSWGK G G T +G Y S S
Sbjct: 288 AAKAIVQMNNQDVGGQLVRCSWGK----------TGDTGKTPGGSYGYGYGNSSSGGNSQ 337
Query: 543 WYNTYPQQIGGFLXGGPRRAGVH 611
Y+ Y GG GG + G H
Sbjct: 338 PYSGYG---GGGAYGGGQGGGGH 357
Score = 56.0 bits (129), Expect = 2e-08
Identities = 34/146 (23%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Frame = +3
Query: 30 YGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSS 209
Y FV + +A A+ +MN + L R ++ NWA +P ++++++
Sbjct: 86 YAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAV-EPGQQQSKIDT------------- 131
Query: 210 ASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD------KGYAFIRFSTKESATH 371
+ V+ G L++ + + +++ FQPFG + + +V +D KGY F+ + +E A
Sbjct: 132 TRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAER 191
Query: 372 AIVAVHNTDINGQPVKCSWG-KESGD 446
AI ++ + + ++ +W ++ GD
Sbjct: 192 AIEQMNGQWLGRRTIRTNWATRKPGD 217
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +3
Query: 222 TVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKG---YAFIRFSTKESATHAIVAVHN 392
T+Y G L + +TE+ + F G++ + +V D YAF+ FS A+ A+ ++
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNK 106
Query: 393 TDINGQPVKCSWGKESG 443
+ + +K +W E G
Sbjct: 107 RLLLDREMKVNWAVEPG 123
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 173 bits (421), Expect = 9e-44
Identities = 92/203 (45%), Positives = 121/203 (59%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
D T KSKGYGFVSY K+ EAE AI MNGQWLG R+IRTNWATRKP + + +
Sbjct: 137 DTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKS 196
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIRFSTKES 362
+DE+YNQ+S N +VY G + + LTE+ +++ F FG I E+R+FK +GYAF++F K++
Sbjct: 197 YDEIYNQTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDA 255
Query: 363 ATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPFGTAYTASGVPPASY 542
A AIV ++N D+ GQ V+CSWGK G G T +G Y S S
Sbjct: 256 AAKAIVQMNNQDVGGQLVRCSWGK----------TGDTGKTPGGSYGYGYGNSSSGGNSQ 305
Query: 543 WYNTYPQQIGGFLXGGPRRAGVH 611
Y+ Y GG GG + G H
Sbjct: 306 PYSGYG---GGGAYGGGQGGGGH 325
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Frame = +3
Query: 225 VYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD------KGYAFIRFSTKESATHAIVAV 386
V+ G L++ + + +++ FQPFG + + +V +D KGY F+ + +E A AI +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 387 HNTDINGQPVKCSWG-KESGD 446
+ + + ++ +W ++ GD
Sbjct: 165 NGQWLGRRTIRTNWATRKPGD 185
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 163 bits (395), Expect = 1e-40
Identities = 87/192 (45%), Positives = 111/192 (57%), Gaps = 18/192 (9%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNE------- 161
D T K KGYGFVSY ++ +AE AI MNG WLG R+IRTNWATRKP
Sbjct: 166 DNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDEDGERGGDRGDR 225
Query: 162 -----------LNSKPLTFDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEI 308
N T+DE++NQ++A N +VY G + L E+ +++ F FG I E+
Sbjct: 226 RGGGGGGRDRYHNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEV 284
Query: 309 RVFKDKGYAFIRFSTKESATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTA 488
R FK +GYAF++F TKESA AIV ++N DI GQ V+CSWGK SGD +G GG
Sbjct: 285 RTFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSWGK-SGDSGKPSERGSGGGGG 343
Query: 489 YSPFGTAYTASG 524
+G Y SG
Sbjct: 344 SGNYGYGYGNSG 355
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 6/150 (4%)
Frame = +3
Query: 30 YGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSS 209
Y FV + ++A A+ S NG+ L + + WA P E SKP T +
Sbjct: 80 YAFVEFSDHNQATLALQSHNGRELLEKEMHVTWAFE--PREPGENRSKPETSRHFH---- 133
Query: 210 ASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD------KGYAFIRFSTKESATH 371
V+ G L + + +++ F FG + E ++ +D KGY F+ + +E A
Sbjct: 134 -----VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAER 188
Query: 372 AIVAVHNTDINGQPVKCSWGKESGDPNNSQ 461
AI ++ + + ++ +W D + +
Sbjct: 189 AIDEMNGAWLGRRTIRTNWATRKPDEDGER 218
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/85 (20%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 222 TVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD---KGYAFIRFSTKESATHAIVAVHN 392
T++ L +T+E + F G + + ++ + YAF+ FS AT A+ + +
Sbjct: 41 TLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQSHNG 100
Query: 393 TDINGQPVKCSWGKESGDPNNSQAQ 467
++ + + +W E +P ++++
Sbjct: 101 RELLEKEMHVTWAFEPREPGENRSK 125
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 151 bits (367), Expect = 3e-37
Identities = 68/152 (44%), Positives = 99/152 (65%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
D QT KSKGYGFVS+ K AE+AI MNG+W+G R++RTNWA RK +E N LT
Sbjct: 169 DVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARK----NSEENRDKLT 224
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIRFSTKES 362
F++V+N + A N +VY G ++ T+ ++ F +G I E+R+FK + YAF+R+ KE
Sbjct: 225 FEQVFNSTKADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKEC 284
Query: 363 ATHAIVAVHNTDINGQPVKCSWGKESGDPNNS 458
AT AI+ ++ ++ G V+CSWG+ PN +
Sbjct: 285 ATKAIMEMNGKEMAGNQVRCSWGRTQAVPNQA 316
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Frame = +3
Query: 225 VYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD------KGYAFIRFSTKESATHAIVAV 386
V+ G L+ ++ EL++ TF FG + E +V +D KGY F+ F K++A +AI +
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 387 HNTDINGQPVKCSWGKESGDPNN 455
+ I + V+ +W N
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEEN 219
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 57.6 bits (133), Expect = 7e-09
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKN-ELNSKPLTFDEVY 197
SKGYGFV + + A++AI +NG L + + +P A +N EL F VY
Sbjct: 159 SKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVG--KFQPRAQRNRELGETAKQFTNVY 216
Query: 198 NQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVF----KDKGYAFIRFSTKESA 365
++ + +E ++K F FG I V K KG+ F+ F+ E A
Sbjct: 217 VKNFGDH-----------YNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEA 265
Query: 366 THAIVAVHNTDINGQPVK 419
A+ A+H++ I G +K
Sbjct: 266 ETAVQALHDSTIEGTDLK 283
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/148 (20%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVY 197
KSKG+GFV++ EAE+A+ +++ + ++ + + + ++ K +
Sbjct: 250 KSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAE 309
Query: 198 NQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKES 362
+Y L + ++ ++K F+ +G I +V D KG+ F+ F E
Sbjct: 310 RMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEE 369
Query: 363 ATHAIVAVHNTDINGQPVKCSWGKESGD 446
AT A+ +++ + +P+ + G+ D
Sbjct: 370 ATSAVTEMNSKMVCSKPLYVAIGQRKED 397
Score = 49.6 bits (113), Expect = 2e-06
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
D T S GY +V++ + ++AE A+ +MN + L + +R W+ R P
Sbjct: 66 DNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDP------------- 112
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRF 347
+S A N ++ L + + + TF FG I +V D KGY F+ F
Sbjct: 113 ---AMRRSGAGN--IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHF 167
Query: 348 STKESATHAIVAVHNTDINGQPV 416
T+E+A +AI V+ + G+ V
Sbjct: 168 ETEEAAQNAIQKVNGMLLAGKKV 190
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +3
Query: 204 SSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESA 365
SS + ++Y G L + E ++ + F G + IRV +D GYA++ F A
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 366 THAIVAVHNTDINGQPVKCSWGK 434
A+ ++ ++G+P++ W +
Sbjct: 87 ERAMDTMNFEALHGKPMRIMWSQ 109
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 57.2 bits (132), Expect = 9e-09
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKN-ELNSKPLTFDEVY 197
SKGYGFV + + A++AI +NG L + + +P A +N EL F VY
Sbjct: 96 SKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVG--KFQPRAQRNRELGETAKQFTNVY 153
Query: 198 NQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVF----KDKGYAFIRFSTKESA 365
++ + +E ++K F FG I V K KG+ F+ F+ E A
Sbjct: 154 VKNFGDH-----------YNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEA 202
Query: 366 THAIVAVHNTDINGQPVK 419
A+ A+H++ I G +K
Sbjct: 203 ETAVQALHDSTIEGTDLK 220
Score = 53.2 bits (122), Expect = 2e-07
Identities = 37/186 (19%), Positives = 78/186 (41%), Gaps = 5/186 (2%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVY 197
KSKG+GFV++ EAE+A+ +++ + ++ + + + ++ K +
Sbjct: 187 KSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAE 246
Query: 198 NQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKES 362
+Y L + ++ ++K F+ +G I +V D KG+ F+ F E
Sbjct: 247 RMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEE 306
Query: 363 ATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPFGTAYTASGVPPASY 542
AT A+ +++ + +P+ + + D + QL + VP A+
Sbjct: 307 ATSAVTEMNSKMVCSKPLYVAIAQRKED-----RRAQLASQYMQRLASMRMHGNVPGAAM 361
Query: 543 WYNTYP 560
+ T P
Sbjct: 362 YNPTQP 367
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 57.2 bits (132), Expect = 9e-09
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKN-ELNSKPLTFDEVY 197
SKGYGFV + + A++AI +NG L + + +P A +N EL F VY
Sbjct: 159 SKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVG--KFQPRAQRNRELGETAKQFTNVY 216
Query: 198 NQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVF----KDKGYAFIRFSTKESA 365
++ + +E ++K F FG I V K KG+ F+ F+ E A
Sbjct: 217 VKNFGDH-----------YNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEA 265
Query: 366 THAIVAVHNTDINGQPVK 419
A+ A+H++ I G +K
Sbjct: 266 ETAVQALHDSTIEGTDLK 283
Score = 53.2 bits (122), Expect = 2e-07
Identities = 37/186 (19%), Positives = 78/186 (41%), Gaps = 5/186 (2%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVY 197
KSKG+GFV++ EAE+A+ +++ + ++ + + + ++ K +
Sbjct: 250 KSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAE 309
Query: 198 NQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKES 362
+Y L + ++ ++K F+ +G I +V D KG+ F+ F E
Sbjct: 310 RMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEE 369
Query: 363 ATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPFGTAYTASGVPPASY 542
AT A+ +++ + +P+ + + D + QL + VP A+
Sbjct: 370 ATSAVTEMNSKMVCSKPLYVAIAQRKED-----RRAQLASQYMQRLASMRMHGNVPGAAM 424
Query: 543 WYNTYP 560
+ T P
Sbjct: 425 YNPTQP 430
Score = 49.6 bits (113), Expect = 2e-06
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
D T S GY +V++ + ++AE A+ +MN + L + +R W+ R P
Sbjct: 66 DNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDP------------- 112
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRF 347
+S A N ++ L + + + TF FG I +V D KGY F+ F
Sbjct: 113 ---AMRRSGAGN--IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHF 167
Query: 348 STKESATHAIVAVHNTDINGQPV 416
T+E+A +AI V+ + G+ V
Sbjct: 168 ETEEAAQNAIQKVNGMLLAGKKV 190
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +3
Query: 204 SSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESA 365
SS + ++Y G L + E ++ + F G + IRV +D GYA++ F A
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 366 THAIVAVHNTDINGQPVKCSWGK 434
A+ ++ ++G+P++ W +
Sbjct: 87 ERAMDTMNFEALHGKPMRIMWSQ 109
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPL- 179
D T S GY +V++ + ++AE A+ +MN + L + +R W+ R P ++ + +
Sbjct: 66 DNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIK 125
Query: 180 TFDEVY--------------NQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVF 317
D+V+ +++ VY +E ++K F FG I V
Sbjct: 126 NLDKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM 185
Query: 318 ----KDKGYAFIRFSTKESATHAIVAVHNTDINGQPVK 419
K KG+ F+ F+ E A A+ A+H++ I G +K
Sbjct: 186 TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLK 223
Score = 53.2 bits (122), Expect = 2e-07
Identities = 37/186 (19%), Positives = 78/186 (41%), Gaps = 5/186 (2%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVY 197
KSKG+GFV++ EAE+A+ +++ + ++ + + + ++ K +
Sbjct: 190 KSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAE 249
Query: 198 NQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKES 362
+Y L + ++ ++K F+ +G I +V D KG+ F+ F E
Sbjct: 250 RMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEE 309
Query: 363 ATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPFGTAYTASGVPPASY 542
AT A+ +++ + +P+ + + D + QL + VP A+
Sbjct: 310 ATSAVTEMNSKMVCSKPLYVAIAQRKED-----RRAQLASQYMQRLASMRMHGNVPGAAM 364
Query: 543 WYNTYP 560
+ T P
Sbjct: 365 YNPTQP 370
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +3
Query: 204 SSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESA 365
SS + ++Y G L + E ++ + F G + IRV +D GYA++ F A
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 366 THAIVAVHNTDINGQPVKCSWGK 434
A+ ++ ++G+P++ W +
Sbjct: 87 ERAMDTMNFEALHGKPMRIMWSQ 109
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 55.2 bits (127), Expect = 4e-08
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
D T +S GYGFV+Y+++ +A A++S NG L +++I+ ++A P N+
Sbjct: 76 DKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYA-----RPSND------- 123
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD------KGYAFIR 344
Q SN +Y G+ +T ++ F+PFG I R+ D KG F+R
Sbjct: 124 ------QIKGSN--LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVR 175
Query: 345 FSTKESATHAIVAVHNTDING 407
F K+ A AI ++ + +G
Sbjct: 176 FDKKDEADVAIKTLNGSIPSG 196
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Frame = +3
Query: 240 LTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESATHAIVAVHNTDI 401
L G+T+E ++ F G I+ ++ +DK GY F+ + +E A A+ + + +
Sbjct: 49 LPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRL 108
Query: 402 NGQPVKCSWGKESGD 446
+ +K S+ + S D
Sbjct: 109 QNKTIKVSYARPSND 123
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/77 (23%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +3
Query: 204 SSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKESAT 368
S + ++ L++ + L+ + F FG I +++ +D KGYAF+ S A
Sbjct: 369 SDTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAY 428
Query: 369 HAIVAVHNTDINGQPVK 419
+A+++++ T++ G+ ++
Sbjct: 429 NAMLSLNGTNLAGKTLQ 445
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 12 TLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKP 143
T + KGY FVS +EA +A+ S+NG L ++++ + + P
Sbjct: 410 TQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQVVFKSSTP 453
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 55.2 bits (127), Expect = 4e-08
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTN-WATRKPPAPKNELNSKPL 179
DP T K + FV Y A A SMNGQ LG R+++ N ++ P+N ++P+
Sbjct: 136 DPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPI 195
Query: 180 TFDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFK------DKGYAFI 341
++ + + VY + L+E ++ F+ FG I + ++ + +G+ ++
Sbjct: 196 I--DMVQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYL 253
Query: 342 RFSTKESATHAIVAVHNTDINGQ 410
F+ S + AI ++ D+ GQ
Sbjct: 254 EFNNLTSQSEAIAGMNMFDLGGQ 276
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Frame = +3
Query: 189 EVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD------KGYAFIRFS 350
++Y+Q+ + +Y G ++ + E+++++ F PFG I+ I + D K +AF+ +
Sbjct: 92 QMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Query: 351 TKESATHAIVAVHNTDINGQPVK 419
E+A A +++ + G+ +K
Sbjct: 152 VPEAALLAQESMNGQMLGGRNLK 174
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 55.2 bits (127), Expect = 4e-08
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTN-WATRKPPAPKNELNSKPL 179
DP T K + FV Y A A SMNGQ LG R+++ N ++ P+N ++P+
Sbjct: 136 DPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPI 195
Query: 180 TFDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFK------DKGYAFI 341
++ + + VY + L+E ++ F+ FG I + ++ + +G+ ++
Sbjct: 196 I--DMVQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYL 253
Query: 342 RFSTKESATHAIVAVHNTDINGQ 410
F+ S + AI ++ D+ GQ
Sbjct: 254 EFNNLTSQSEAIAGMNMFDLGGQ 276
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Frame = +3
Query: 189 EVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD------KGYAFIRFS 350
++Y+Q+ + +Y G ++ + E+++++ F PFG I+ I + D K +AF+ +
Sbjct: 92 QMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Query: 351 TKESATHAIVAVHNTDINGQPVK 419
E+A A +++ + G+ +K
Sbjct: 152 VPEAALLAQESMNGQMLGGRNLK 174
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 55.2 bits (127), Expect = 4e-08
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTN-WATRKPPAPKNELNSKPL 179
DP T K + FV Y A A SMNGQ LG R+++ N ++ P+N ++P+
Sbjct: 136 DPATGHHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPI 195
Query: 180 TFDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFK------DKGYAFI 341
++ + + VY + L+E ++ F+ FG I + ++ + +G+ ++
Sbjct: 196 I--DMVQKDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYL 253
Query: 342 RFSTKESATHAIVAVHNTDINGQ 410
F+ S + AI ++ D+ GQ
Sbjct: 254 EFNNLTSQSEAIAGMNMFDLGGQ 276
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Frame = +3
Query: 189 EVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD------KGYAFIRFS 350
++Y+Q+ + +Y G ++ + E+++++ F PFG I+ I + D K +AF+ +
Sbjct: 92 QMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Query: 351 TKESATHAIVAVHNTDINGQPVK 419
E+A A +++ + G+ +K
Sbjct: 152 VPEAALLAQESMNGQMLGGRNLK 174
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSK-PL 179
DP T S+G+GFV++ AESA+ + LG +++ + K P+ +++S P
Sbjct: 83 DPNTKHSRGFGFVTFASIFSAESAMNDRPHK-LGGKTVDS-----KRAIPREQMSSMIPP 136
Query: 180 TFDEVYNQSSASNCTVYCGGLTTGL-TEELMQKTFQPFGTIQEIRVF-KDKGYAFIRFST 353
F + A C + G+T G+ + + ++ F+ FGT+ ++ + + +G F+ +
Sbjct: 137 PF---FETDPAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYED 193
Query: 354 KESATHAIVAVHNT 395
KESA + HN+
Sbjct: 194 KESADRCL--AHNS 205
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSK-PL 179
DP T S+G+GFV++ AESA+ + LG +++ + K P+ +++S P
Sbjct: 103 DPNTKHSRGFGFVTFASIFSAESAMNDRPHK-LGGKTVDS-----KRAIPREQMSSMIPP 156
Query: 180 TFDEVYNQSSASNCTVYCGGLTTGL-TEELMQKTFQPFGTIQEIRVF-KDKGYAFIRFST 353
F + A C + G+T G+ + + ++ F+ FGT+ ++ + + +G F+ +
Sbjct: 157 PF---FETDPAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYED 213
Query: 354 KESATHAIVAVHNT 395
KESA + HN+
Sbjct: 214 KESADRCL--AHNS 225
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSK-PL 179
DP T S+G+GFV++ AESA+ + LG +++ + K P+ +++S P
Sbjct: 104 DPNTKHSRGFGFVTFASIFSAESAMNDRPHK-LGGKTVDS-----KRAIPREQMSSMIPP 157
Query: 180 TFDEVYNQSSASNCTVYCGGLTTGL-TEELMQKTFQPFGTIQEIRVF-KDKGYAFIRFST 353
F + A C + G+T G+ + + ++ F+ FGT+ ++ + + +G F+ +
Sbjct: 158 PF---FETDPAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYED 214
Query: 354 KESATHAIVAVHNT 395
KESA + HN+
Sbjct: 215 KESADRCL--AHNS 226
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 51.2 bits (117), Expect = 6e-07
Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 6/194 (3%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKN-ELNSKPLTFDEV 194
K KG+GFV++ + A A+ +N L + + + + ++ EL K +
Sbjct: 276 KPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQE 335
Query: 195 YNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKE 359
Q +Y + L ++ ++ F FGTI +V D KG+ F+ F E
Sbjct: 336 RVQ-RYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPE 394
Query: 360 SATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPFGTAYTASGVPPAS 539
AT A+ +++ I +P+ + + D A + A G ASGVP +
Sbjct: 395 EATAAVTDMNSKMIGAKPLYVALAQRKEDRRAQLASQYMQRLATLRMG--QQASGVPAMT 452
Query: 540 YWYNTYPQQIGGFL 581
Y P Q G F+
Sbjct: 453 QLYQ--PGQQGYFV 464
Score = 48.0 bits (109), Expect = 6e-06
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYN 200
S GY +V++ + ++AE A+ +MN + + R +R W+ R P A +
Sbjct: 97 SLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARR--------------- 141
Query: 201 QSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKESA 365
A N ++ L + + + TF FG I +V D KGY F+ F T+ SA
Sbjct: 142 ---AGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSA 198
Query: 366 THAIVAVHNTDINGQPV 416
AI V+ ++ + V
Sbjct: 199 QTAIEKVNGMLLSDKKV 215
Score = 45.2 bits (102), Expect = 4e-05
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPK-NELNSKPLTFDEVY 197
SKGYGFV + + A++AI +NG L + + +P A + EL L + V+
Sbjct: 184 SKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV--GKFQPRAQRMKELGESGLKYTNVF 241
Query: 198 NQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKES 362
++ + L +E + F FG I V D KG+ F+ F+ +++
Sbjct: 242 VKNFGEH-----------LDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDA 290
Query: 363 ATHAIVAVHNTDINGQPVKCS 425
A A+ ++++ + G K S
Sbjct: 291 AGQAVEKLNDSILEGTDCKLS 311
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +3
Query: 213 SNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESATHA 374
S ++Y G L ++E ++ + F G + IRV +D GYA++ F A A
Sbjct: 55 SMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERA 114
Query: 375 IVAVHNTDINGQPVKCSWGK 434
+ ++ I+G+P++ W +
Sbjct: 115 LDTMNFEVIHGRPMRIMWSQ 134
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 51.2 bits (117), Expect = 6e-07
Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 6/194 (3%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKN-ELNSKPLTFDEV 194
K KG+GFV++ + A A+ +N L + + + + ++ EL K +
Sbjct: 276 KPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQE 335
Query: 195 YNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKE 359
Q +Y + L ++ ++ F FGTI +V D KG+ F+ F E
Sbjct: 336 RVQ-RYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPE 394
Query: 360 SATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPFGTAYTASGVPPAS 539
AT A+ +++ I +P+ + + D A + A G ASGVP +
Sbjct: 395 EATAAVTDMNSKMIGAKPLYVALAQRKEDRRAQLASQYMQRLATLRMG--QQASGVPAMT 452
Query: 540 YWYNTYPQQIGGFL 581
Y P Q G F+
Sbjct: 453 QLYQ--PGQQGYFV 464
Score = 48.0 bits (109), Expect = 6e-06
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYN 200
S GY +V++ + ++AE A+ +MN + + R +R W+ R P A +
Sbjct: 97 SLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARR--------------- 141
Query: 201 QSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKESA 365
A N ++ L + + + TF FG I +V D KGY F+ F T+ SA
Sbjct: 142 ---AGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSA 198
Query: 366 THAIVAVHNTDINGQPV 416
AI V+ ++ + V
Sbjct: 199 QTAIEKVNGMLLSDKKV 215
Score = 45.2 bits (102), Expect = 4e-05
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPK-NELNSKPLTFDEVY 197
SKGYGFV + + A++AI +NG L + + +P A + EL L + V+
Sbjct: 184 SKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV--GKFQPRAQRMKELGESGLKYTNVF 241
Query: 198 NQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKES 362
++ + L +E + F FG I V D KG+ F+ F+ +++
Sbjct: 242 VKNFGEH-----------LDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDA 290
Query: 363 ATHAIVAVHNTDINGQPVKCS 425
A A+ ++++ + G K S
Sbjct: 291 AGQAVEKLNDSILEGTDCKLS 311
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +3
Query: 213 SNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESATHA 374
S ++Y G L ++E ++ + F G + IRV +D GYA++ F A A
Sbjct: 55 SMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERA 114
Query: 375 IVAVHNTDINGQPVKCSWGK 434
+ ++ I+G+P++ W +
Sbjct: 115 LDTMNFEVIHGRPMRIMWSQ 134
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 46.0 bits (104), Expect = 2e-05
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 7/200 (3%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
DP T +++G+GF++++ S + + + + L + I A K K +K
Sbjct: 79 DPATKRARGFGFITFVDPSSVDKVLNNREHE-LDGKKIDPKVAFPKRTQAKLVTKTK--- 134
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIR 344
V+ GGL+ T E M++ F+ +G +++ + DK G+ F+
Sbjct: 135 -------------KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVT 181
Query: 345 FSTKESATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPFGTAYTASG 524
F + E A + +H +ING+ V+C + P QL + + Y G
Sbjct: 182 FDSDEVA-DKVCEIHFHEINGKMVEC----KKAQPKEVMLPVQLNKSRAAAARNLY---G 233
Query: 525 VPPASYW-YNTYPQQIGGFL 581
+PP + Y Y + GG L
Sbjct: 234 MPPETLLAYAQYLPRFGGNL 253
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 46.0 bits (104), Expect = 2e-05
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 7/200 (3%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
DP T +++G+GF++++ S + + + + L + I A K K +K
Sbjct: 79 DPATKRARGFGFITFVDPSSVDKVLNNREHE-LDGKKIDPKVAFPKRTQAKLVTKTK--- 134
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIR 344
V+ GGL+ T E M++ F+ +G +++ + DK G+ F+
Sbjct: 135 -------------KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVT 181
Query: 345 FSTKESATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPFGTAYTASG 524
F + E A + +H +ING+ V+C + P QL + + Y G
Sbjct: 182 FDSDEVA-DKVCEIHFHEINGKMVEC----KKAQPKEVMLPVQLNKSRAAAARNLY---G 233
Query: 525 VPPASYW-YNTYPQQIGGFL 581
+PP + Y Y + GG L
Sbjct: 234 MPPETLLAYAQYLPRFGGNL 253
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +3
Query: 222 TVYCGGLTTGLTEELMQKTFQPFGTIQEIRV------FKDKGYAFIRFSTKESATHAIVA 383
T+Y GG T +TE+++ F PFG + I + K +G+ F+ F E A AI
Sbjct: 12 TLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDN 71
Query: 384 VHNTDINGQPVKCSWGKESGDPNNSQ 461
++ +++ G+ ++ ++ + SQ
Sbjct: 72 MNESELFGKTIRVNFARPPKATERSQ 97
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
D ++ K +G+GFV + +A AI +MN L ++IR N+A +PP E + KP+
Sbjct: 45 DYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFA--RPP-KATERSQKPVW 101
Query: 183 FDE 191
D+
Sbjct: 102 ADD 104
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 44.8 bits (101), Expect = 5e-05
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Frame = +3
Query: 99 LGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSSASNCTVYCGGLTTG----LTEEL 266
L ++IR + P + LN + + + + T+Y G L +TE+
Sbjct: 196 LSRQNIRDRYYGTNDPVAEKILN-RAAAAPTLSPPADTTITTLYIGNLGPSGAQQVTEKD 254
Query: 267 MQKTFQPFGTIQEIRVFKDKGYAFIRFSTKESATHAIVAVHN-TDINGQPVKCSWGK 434
+ F +G I+ +RV +KG AFI F+T+E+A A N T I G+ + WG+
Sbjct: 255 LNDFFYQYGDIRCLRVLTEKGCAFIEFTTREAAERAAERSFNKTFIKGKRLTIRWGE 311
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = +3
Query: 186 DEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIRFSTKESA 365
DEV + C ++ G L + E +++ F P G I E KG+AF+R T+ A
Sbjct: 105 DEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-YLSGKGFAFLRLDTRAHA 163
Query: 366 THAIVAVHNTDINGQPVK 419
A A+ I+G+ V+
Sbjct: 164 ESAKEAIDGRIIHGRQVR 181
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 15 LKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELN 167
L KG+ F+ ++ AESA +++G+ + R +R +A EL+
Sbjct: 147 LSGKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELS 197
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = +3
Query: 186 DEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIRFSTKESA 365
DEV + C ++ G L + E +++ F P G I E KG+AF+R T+ A
Sbjct: 105 DEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-YLSGKGFAFLRLDTRAHA 163
Query: 366 THAIVAVHNTDINGQPVK 419
A A+ I+G+ V+
Sbjct: 164 ESAKEAIDGRIIHGRQVR 181
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 15 LKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELN 167
L KG+ F+ ++ AESA +++G+ + R +R +A EL+
Sbjct: 147 LSGKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELS 197
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 44.4 bits (100), Expect = 7e-05
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
DP T +S+G+GFV++ K+E ++A+ I K P+++ N
Sbjct: 57 DPTTKRSRGFGFVTFSGKTEVDAAMKQR------PHIIDGKTVDPKRAVPRDDKNR---- 106
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIR 344
++S+ S +Y G+ TE+++ + F +GT+ + + DK G+ F+
Sbjct: 107 -----SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 161
Query: 345 FSTKESATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQ 467
F +S ++ + +NG +C K S+AQ
Sbjct: 162 FDDHDSVDQCVLQKSHM-VNGH--RCDVRKGLSKDEMSKAQ 199
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 44.4 bits (100), Expect = 7e-05
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
DP T +S+G+GFV++ K+E ++A+ I K P+++ N
Sbjct: 19 DPTTKRSRGFGFVTFSGKTEVDAAMKQR------PHIIDGKTVDPKRAVPRDDKNR---- 68
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIR 344
++S+ S +Y G+ TE+++ + F +GT+ + + DK G+ F+
Sbjct: 69 -----SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 123
Query: 345 FSTKESATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQ 467
F +S ++ + +NG +C K S+AQ
Sbjct: 124 FDDHDSVDQCVLQKSHM-VNGH--RCDVRKGLSKDEMSKAQ 161
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 44.4 bits (100), Expect = 7e-05
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
DP T +S+G+GFV++ K+E ++A+ I K P+++ N
Sbjct: 19 DPTTKRSRGFGFVTFSGKTEVDAAMKQR------PHIIDGKTVDPKRAVPRDDKNR---- 68
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIR 344
++S+ S +Y G+ TE+++ + F +GT+ + + DK G+ F+
Sbjct: 69 -----SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 123
Query: 345 FSTKESATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQ 467
F +S ++ + +NG +C K S+AQ
Sbjct: 124 FDDHDSVDQCVLQKSHM-VNGH--RCDVRKGLSKDEMSKAQ 161
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 44.4 bits (100), Expect = 7e-05
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
DP T +S+G+GFV++ K+E ++A+ I K P+++ N
Sbjct: 57 DPTTKRSRGFGFVTFSGKTEVDAAMKQR------PHIIDGKTVDPKRAVPRDDKNR---- 106
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIR 344
++S+ S +Y G+ TE+++ + F +GT+ + + DK G+ F+
Sbjct: 107 -----SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 161
Query: 345 FSTKESATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQ 467
F +S ++ + +NG +C K S+AQ
Sbjct: 162 FDDHDSVDQCVLQKSHM-VNGH--RCDVRKGLSKDEMSKAQ 199
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 44.4 bits (100), Expect = 7e-05
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
DP T +S+G+GFV++ K+E ++A+ I K P+++ N
Sbjct: 57 DPTTKRSRGFGFVTFSGKTEVDAAMKQR------PHIIDGKTVDPKRAVPRDDKNR---- 106
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIR 344
++S+ S +Y G+ TE+++ + F +GT+ + + DK G+ F+
Sbjct: 107 -----SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 161
Query: 345 FSTKESATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQ 467
F +S ++ + +NG +C K S+AQ
Sbjct: 162 FDDHDSVDQCVLQKSHM-VNGH--RCDVRKGLSKDEMSKAQ 199
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 43.6 bits (98), Expect = 1e-04
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Frame = +3
Query: 225 VYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKESA------TH 371
++ GG T TE +++ F+ F ++++++ K KGY FI F T++ A T
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIRKLTP 127
Query: 372 AIVAVHNTDINGQPVKCSWGKESGDPNNSQAQ-GQLGGTAYSPFGTAYTASGVPPASYWY 548
+ + +N P S P+ + A QL + PF A AS P + Y Y
Sbjct: 128 KQLEFRSRKLNLGPAIRKINSNSFQPSYAIATPSQLVAASPGPFSYAIPASPSPYSGYSY 187
Query: 549 NTYPQ 563
PQ
Sbjct: 188 PASPQ 192
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 43.6 bits (98), Expect = 1e-04
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Frame = +3
Query: 225 VYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKESA------TH 371
++ GG T TE +++ F+ F ++++++ K KGY FI F T++ A T
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIRKLTP 128
Query: 372 AIVAVHNTDINGQPVKCSWGKESGDPNNSQAQ-GQLGGTAYSPFGTAYTASGVPPASYWY 548
+ + +N P S P+ + A QL + PF A AS P + Y Y
Sbjct: 129 KQLEFRSRKLNLGPAIRKINSNSFQPSYAIATPSQLVAASPGPFSYAIPASPSPYSGYSY 188
Query: 549 NTYPQ 563
PQ
Sbjct: 189 PASPQ 193
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Frame = +3
Query: 201 QSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD------KGYAFIRFSTKES 362
Q S V+ + TE+ + F +G I+ I + D KGYA + + T++
Sbjct: 49 QRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKE 108
Query: 363 ATHAIVAVHNTDINGQPVKCSW 428
A AI ++TD+ GQ VK W
Sbjct: 109 ANEAIDQSNDTDLLGQNVKVDW 130
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNW 128
D +T KGY V Y + EA AI N L ++++ +W
Sbjct: 89 DRRTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQNVKVDW 130
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Frame = +3
Query: 222 TVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESATHAIVA 383
+VY G TEE + F G I +R+ D+ G+AFI F+ + SA A+
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 384 VHNTDINGQPVK 419
++ + NG+P++
Sbjct: 66 MNGAEFNGRPLR 77
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 41.5 bits (93), Expect = 5e-04
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
D T +G+GFV ++ + +A+ AI +N L + I+ N A+
Sbjct: 47 DRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKAS---------------- 90
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEI-RVFKD------KGYAFI 341
+ ++ ++ G L + E+L+ TF FG I ++ ++ +D KG+AFI
Sbjct: 91 ---AHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFI 147
Query: 342 RFSTKESATHAIVAVHNTDINGQPVKCSW 428
F++ E++ A+ A++ + + + S+
Sbjct: 148 NFASFEASDTALEAMNGQFLCNRAITVSY 176
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = +3
Query: 216 NCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESATHAI 377
+ T+Y GGL ++E ++ + G + + + KD+ G+ F+ F +E A +AI
Sbjct: 12 DATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAI 71
Query: 378 VAVHNTDINGQPVK 419
++ + G+P+K
Sbjct: 72 KILNMIKLYGKPIK 85
Score = 35.9 bits (79), Expect = 0.024
Identities = 13/40 (32%), Positives = 29/40 (72%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRK 140
SKG+ F+++ +++A+ +MNGQ+L +R+I ++A ++
Sbjct: 141 SKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKR 180
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 41.5 bits (93), Expect = 5e-04
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLT 182
D T +G+GFV ++ + +A+ AI +N L + I+ N A+
Sbjct: 57 DRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKAS---------------- 100
Query: 183 FDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEI-RVFKD------KGYAFI 341
+ ++ ++ G L + E+L+ TF FG I ++ ++ +D KG+AFI
Sbjct: 101 ---AHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFI 157
Query: 342 RFSTKESATHAIVAVHNTDINGQPVKCSW 428
F++ E++ A+ A++ + + + S+
Sbjct: 158 NFASFEASDTALEAMNGQFLCNRAITVSY 186
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = +3
Query: 216 NCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESATHAI 377
+ T+Y GGL ++E ++ + G + + + KD+ G+ F+ F +E A +AI
Sbjct: 22 DATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAI 81
Query: 378 VAVHNTDINGQPVK 419
++ + G+P+K
Sbjct: 82 KILNMIKLYGKPIK 95
Score = 35.9 bits (79), Expect = 0.024
Identities = 13/40 (32%), Positives = 29/40 (72%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRK 140
SKG+ F+++ +++A+ +MNGQ+L +R+I ++A ++
Sbjct: 151 SKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKR 190
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +3
Query: 225 VYCGGLTTGLTEELMQKTFQPFGTIQEIRVF------KDKGYAFIRFSTKESATHAIVAV 386
V+CG L +++EL+ K F+ + + Q+ +V K KGY F+ F E A+ +
Sbjct: 205 VFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREM 264
Query: 387 HNTDINGQPVK 419
+ +P+K
Sbjct: 265 DGKYVGNRPIK 275
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
+ +T KSKGYGFVS+ + A+ M+G+++G+R I+
Sbjct: 237 ESRTNKSKGYGFVSFRDSEDYVRAMREMDGKYVGNRPIK 275
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/107 (22%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Frame = +3
Query: 213 SNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESATHA 374
++CT+Y G L+ E+ + + F G ++ + + D+ G+ F+ + T+E A A
Sbjct: 35 TSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELA 94
Query: 375 IVAVHNTDINGQPVKCSWGKESGDPNNSQ-AQGQLGGTAYSPFGTAY 512
+ + NT ++ + ++ W ++G Q +G+ GG + Y
Sbjct: 95 LQNISNTRMDDRVIRADW--DAGFIEGRQYGRGKHGGQVRDEYRKDY 139
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +3
Query: 276 TFQPFGTIQEIRVFKDKG------YAFIRFSTKESATHAIVAVHNTDINGQPVKCSWGKE 437
TF PFG I +VF DK + F+ + +SAT+AI A++ I + +K +
Sbjct: 354 TFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD 413
Query: 438 SGDPNN 455
G+P N
Sbjct: 414 RGNPYN 419
Score = 35.5 bits (78), Expect = 0.032
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
D T SK +GFVSY A +AI++MNG +GS+ ++
Sbjct: 369 DKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 407
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +3
Query: 276 TFQPFGTIQEIRVFKDKG------YAFIRFSTKESATHAIVAVHNTDINGQPVKCSWGKE 437
TF PFG I +VF DK + F+ + +SAT+AI A++ I + +K +
Sbjct: 518 TFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD 577
Query: 438 SGDPNN 455
G+P N
Sbjct: 578 RGNPYN 583
Score = 35.5 bits (78), Expect = 0.032
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
D T SK +GFVSY A +AI++MNG +GS+ ++
Sbjct: 533 DKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 571
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +3
Query: 276 TFQPFGTIQEIRVFKDKG------YAFIRFSTKESATHAIVAVHNTDINGQPVKCSWGKE 437
TF PFG I +VF DK + F+ + +SAT+AI A++ I + +K +
Sbjct: 518 TFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD 577
Query: 438 SGDPNN 455
G+P N
Sbjct: 578 RGNPYN 583
Score = 35.5 bits (78), Expect = 0.032
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
D T SK +GFVSY A +AI++MNG +GS+ ++
Sbjct: 533 DKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 571
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +3
Query: 276 TFQPFGTIQEIRVFKDKG------YAFIRFSTKESATHAIVAVHNTDINGQPVKCSWGKE 437
TF PFG I +VF DK + F+ + +SAT+AI A++ I + +K +
Sbjct: 447 TFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD 506
Query: 438 SGDPNN 455
G+P N
Sbjct: 507 RGNPYN 512
Score = 35.5 bits (78), Expect = 0.032
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
D T SK +GFVSY A +AI++MNG +GS+ ++
Sbjct: 462 DKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 500
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +3
Query: 276 TFQPFGTIQEIRVFKDKG------YAFIRFSTKESATHAIVAVHNTDINGQPVKCSWGKE 437
TF PFG I +VF DK + F+ + +SAT+AI A++ I + +K +
Sbjct: 518 TFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVD 577
Query: 438 SGDPNN 455
G+P N
Sbjct: 578 RGNPYN 583
Score = 35.5 bits (78), Expect = 0.032
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
D T SK +GFVSY A +AI++MNG +GS+ ++
Sbjct: 533 DKVTNLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLK 571
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 37.1 bits (82), Expect = 0.011
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Frame = +3
Query: 195 YNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIRFSTKESATHA 374
Y +S S ++ GGL + +E++QK F FG ++ I + YA++ + ++ A
Sbjct: 244 YGKSQVSR-RLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQPYAYVVYENTHTSQEA 302
Query: 375 IVAVHNTDIN--GQPVKCSWGKE-SGDPNNSQAQGQLGGTAYSPFGTAYTASGVPPAS 539
++ I+ P+ + K+ + P Q + + SP G +A PP S
Sbjct: 303 CRSLRGACISKGNHPIMVDYAKDLTAQPEKQQFMRKRRASK-SPVGA--SAVRTPPGS 357
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 37.1 bits (82), Expect = 0.011
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Frame = +3
Query: 195 YNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIRFSTKESATHA 374
Y +S S ++ GGL + +E++QK F FG ++ I + YA++ + ++ A
Sbjct: 244 YGKSQVSR-RLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQPYAYVVYENTHTSQEA 302
Query: 375 IVAVHNTDIN--GQPVKCSWGKE-SGDPNNSQAQGQLGGTAYSPFGTAYTASGVPPAS 539
++ I+ P+ + K+ + P Q + + SP G +A PP S
Sbjct: 303 CRSLRGACISKGNHPIMVDYAKDLTAQPEKQQFMRKRRASK-SPVGA--SAVRTPPGS 357
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 37.1 bits (82), Expect = 0.011
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Frame = +3
Query: 195 YNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIRFSTKESATHA 374
Y +S S ++ GGL + +E++QK F FG ++ I + YA++ + ++ A
Sbjct: 221 YGKSQVSR-RLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQPYAYVVYENTHTSQEA 279
Query: 375 IVAVHNTDIN--GQPVKCSWGKE-SGDPNNSQAQGQLGGTAYSPFGTAYTASGVPPAS 539
++ I+ P+ + K+ + P Q + + SP G +A PP S
Sbjct: 280 CRSLRGACISKGNHPIMVDYAKDLTAQPEKQQFMRKRRASK-SPVGA--SAVRTPPGS 334
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Frame = +3
Query: 225 VYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD------KGYAFIRFSTKESATHAIVAV 386
+Y G + T + E+ + F+ G I ++R+ D +GYAF+ + KE A A
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTY 261
Query: 387 HNTDIN-GQPVK 419
+I+ G+P+K
Sbjct: 262 DGHEISTGKPLK 273
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNG 92
DP + S+GY FV+Y K +A +A + +G
Sbjct: 234 DPMSGASRGYAFVTYCNKEDAAAAAKTYDG 263
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWA 131
D +T K KGYGF+ + AE AI ++NG L R +R + A
Sbjct: 52 DRETGKPKGYGFIEFPDIQTAEVAIRNLNGYELSGRILRVDSA 94
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Frame = +3
Query: 213 SNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESATHA 374
S +VY G TE+ + F G + +R+ D+ G+AF+ F+ + +A A
Sbjct: 2 SGFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRA 61
Query: 375 IVAVHNTDINGQPVK 419
+ + D NG+ ++
Sbjct: 62 VDQFNGVDFNGRALR 76
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 36.3 bits (80), Expect = 0.018
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVY 197
K +G+ FV +EA + +G + + N+A ++P +N +
Sbjct: 49 KHRGFAFVQCRSLAEANVLLAKFSGLFT-----KVNFAKKEPKPAENVM----------- 92
Query: 198 NQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQE--IRVFKDKGYAFIRFSTKESATH 371
S+ SN V+ G++ + + + +Q FG I + ++ GY F+ F T+ +A
Sbjct: 93 --SNISN--VFVRGISRDMPDT---ELYQAFGGITDGVVQCHVADGYGFVLFDTRANAQK 145
Query: 372 AIVAVHNTDINGQPVKCSWGK 434
IV + +NG+ + SW +
Sbjct: 146 KIVEMDGKTLNGKLISVSWAR 166
Score = 34.3 bits (75), Expect = 0.075
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +3
Query: 27 GYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWAT-----RKPPAPKNELNSKPLTFD 188
GYGFV + ++ A+ I M+G+ L + I +WA RK P +E + P + D
Sbjct: 131 GYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWARPDTVGRKRKRPMSEESPTPSSTD 189
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 35.5 bits (78), Expect = 0.032
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = +3
Query: 222 TVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESATHAIVA 383
+VY G + TEE + F G + +R+ D+ G+AF+ FS + A A+
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 384 VHNTDINGQPVKCSWGKE 437
++ NG+ ++ ++ +
Sbjct: 67 LNGVAFNGRNLRVNYANK 84
Score = 35.5 bits (78), Expect = 0.032
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATR 137
D +T + +G+ FV + +++ A+ A+ +NG R++R N+A +
Sbjct: 40 DRETGRPRGFAFVEFSEEAGAQRAVEQLNGVAFNGRNLRVNYANK 84
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 35.5 bits (78), Expect = 0.032
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +3
Query: 267 MQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESATHAIVAVHNTDINGQPVKCSW 428
+++TF+ +G I ++ + +DK G+ F+RF + A HA+ ++G+ ++ +
Sbjct: 35 LRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTL 94
Query: 429 GKESGDPNNSQAQGQLGG 482
K + +G GG
Sbjct: 95 AKYDRPSDERGGRGGGGG 112
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPA 149
D + +SKG+GFV + ++ +AE A+ +G+ + R +R A P+
Sbjct: 53 DKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDRPS 101
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 35.5 bits (78), Expect = 0.032
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +3
Query: 267 MQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESATHAIVAVHNTDINGQPVKCSW 428
+++TF+ +G I ++ + +DK G+ F+RF + A HA+ ++G+ ++ +
Sbjct: 35 LRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTL 94
Query: 429 GKESGDPNNSQAQGQLGG 482
K + +G GG
Sbjct: 95 AKYDRPSDERGGRGGGGG 112
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPA 149
D + +SKG+GFV + ++ +AE A+ +G+ + R +R A P+
Sbjct: 53 DKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDRPS 101
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 34.7 bits (76), Expect = 0.056
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
D T +SK +GFVSY +++AIT+MNG +G + ++
Sbjct: 463 DRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLK 501
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 34.7 bits (76), Expect = 0.056
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIR 119
D T +SK +GFVSY +++AIT+MNG +G + ++
Sbjct: 463 DRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLK 501
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 34.3 bits (75), Expect = 0.075
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 186 DEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIR 344
DEV + C ++ G L + E +++ F P G I E KG+AF+R
Sbjct: 105 DEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-YLSGKGFAFLR 156
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 33.9 bits (74), Expect = 0.099
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +3
Query: 198 NQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKE 359
N+S + C V L + E+ ++ F G + I + +DK G+AF+ F +++
Sbjct: 171 NRSDENTCRVT--NLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRD 228
Query: 360 SATHAIVAVHNTDINGQPVKCSWGKES 440
A AI +++ + +K W + S
Sbjct: 229 DAARAIAELNDIRMYHMVLKVEWTRPS 255
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 33.9 bits (74), Expect = 0.099
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPK 155
SKG+GFV+ + +AE A ++G + R I N AT + + K
Sbjct: 191 SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATARVHSKK 235
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 33.9 bits (74), Expect = 0.099
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPK 155
SKG+GFV+ + +AE A ++G + R I N AT + + K
Sbjct: 191 SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATARVHSKK 235
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSK 173
DP+T G+GF+ +++K++AE N + RS+ +WA K N K
Sbjct: 132 DPKTCA--GFGFIQFVEKADAEKGREFFNTNKVLGRSVAADWALDKDTYETNAHEEK 186
Score = 29.9 bits (64), Expect = 1.6
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Frame = +3
Query: 51 KKSEAESAITSMNGQWLGSRSIRTNWATR-----KPPAPKNELNSKPLTFDEVYNQSSAS 215
KK + E G GS + + A+ + PA K + L DE +
Sbjct: 206 KKFDEEEGEEESEGSEDGSEAFEASEASEDDEDDEEPAKKPKNPKAQLKTDESITEGKV- 264
Query: 216 NCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRV--FKD----KGYAFIRFSTKESATHAI 377
V+ L+ EEL+++ FG I + +KD KG AF+ FST A++ I
Sbjct: 265 ---VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCI 321
Query: 378 VAVHN 392
V +
Sbjct: 322 EGVED 326
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 33.1 bits (72), Expect = 0.17
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Frame = +3
Query: 24 KGYGFVSYLKKSEAESAITSMNGQWL-GSRSIRTNWATRKPPAPKNELNSKPLTF-DEVY 197
KGY F+ ++ EA + +NG + G + IR N L F ++ Y
Sbjct: 108 KGYCFIEFITFDEARQTLYDLNGNRIPGFKDIRFN-----------------LCFANDSY 150
Query: 198 NQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFK-----DKGYAFIRFSTKES 362
N +S N ++ + + + + + F + + + ++F+ KG F+RF +
Sbjct: 151 NPNSEFN--LHVSSVPDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTD 208
Query: 363 ATHAIVAVHNTDING 407
A+V +H T + G
Sbjct: 209 QQMALVEMHRTKVGG 223
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRK 140
SKG+GFV+ +A+ A NG + R + N AT++
Sbjct: 20 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRK 140
SKG+GFV+ +A+ A NG + R + N AT++
Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 177
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
SKGY F YL + + AI +NG LG + +
Sbjct: 330 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQL 361
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +3
Query: 195 YNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD------KGYAFIRFSTK 356
++Q+ + +Y GGL+ L+E + F +G + I + +D KG+AF+ + +
Sbjct: 30 WHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQ 89
Query: 357 ESATHAI 377
S A+
Sbjct: 90 RSTILAV 96
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTN 125
D T KSKG+ F+ Y + A+ + NG L R IR +
Sbjct: 72 DKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIRVD 112
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +3
Query: 222 TVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKESATHAIVAV 386
T++ G + +E +++ F+ +G I+++ + D +GYAFI +S K A
Sbjct: 105 TLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKA 164
Query: 387 HNTDINGQPVKCSWGKESGDPNNSQAQGQLGG 482
++G+ + + E G + +LGG
Sbjct: 165 DGIKVDGKRLVVDY--ERGRTQKTWLPRRLGG 194
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRK 140
SKG+GFV+ +A+ A NG + R + N AT++
Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 177
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
SKGY F YL + + AI +NG LG + +
Sbjct: 330 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQL 361
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
SKGY F YL + + AI +NG LG + +
Sbjct: 305 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQL 336
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 21 SKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
SKGY F YL + + AI +NG LG + +
Sbjct: 308 SKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQL 339
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +3
Query: 225 VYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESATHAIVAV 386
++ GG++ + E + F +G + + +V D+ G+AF+ F+T E A+ A
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 387 HNTDINGQPVK 419
T I G+ V+
Sbjct: 91 EQT-IKGKSVE 100
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +3
Query: 225 VYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDK------GYAFIRFSTKESATHAIVAV 386
++ GG++ + E + F +G + + +V D+ G+AF+ F+T E A+ A
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 387 HNTDINGQPVK 419
T I G+ V+
Sbjct: 91 EQT-IKGKSVE 100
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 15 LKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
L G+GFV + K +AE A+ +NG+ LG +
Sbjct: 33 LLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERV 66
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 15 LKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
L G+GFV + K +AE A+ +NG+ LG +
Sbjct: 33 LLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERV 66
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 15 LKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
L G+GFV + K +AE A+ +NG+ LG +
Sbjct: 33 LLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERV 66
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Frame = +3
Query: 60 EAESAITSMNGQWLGSRSIRTNWATR--KPPAPKNELNSKPLTFD-EVYNQSSASNCTVY 230
E I+ G ++ R T A + + PA + ++P + + + N ++
Sbjct: 87 EDSDVISRAKGTFVEKRQKSTKIAKKPYEKPAKNGKSAAEPTQKEPQETDGPGLPNNILF 146
Query: 231 CGGLTTGLTEELMQKTFQPFGTIQEIRVFKD-KGYAFIRFSTKESATHAIVAVHN 392
C + G E +Q F F ++E+R + K +AFI + +++ + A A+ N
Sbjct: 147 CSNIPEGTEPEQIQTIFSQFPGLREVRWMPNTKDFAFIEYESEDLSEPARQALDN 201
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.40
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = +3
Query: 360 SATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPFGTAYTA-----SG 524
+AT A+VA + Q + +G +SG NN +QG GG G+ +G
Sbjct: 10 AATAAVVAQQSNFGGQQQEQSGFGSQSGFGNNQGSQGGFGGNQGGFSGSPQQGGFGGRTG 69
Query: 525 VPPASYWYNTYPQQIGG 575
PP ++ PQ GG
Sbjct: 70 SPPPFGGFSGAPQGFGG 86
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.40
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = +3
Query: 360 SATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPFGTAYTA-----SG 524
+AT A+VA + Q + +G +SG NN +QG GG G+ +G
Sbjct: 16 AATAAVVAQQSNFGGQQQEQSGFGSQSGFGNNQGSQGGFGGNQGGFSGSPQQGGFGGRTG 75
Query: 525 VPPASYWYNTYPQQIGG 575
PP ++ PQ GG
Sbjct: 76 SPPPFGGFSGAPQGFGG 92
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 31.9 bits (69), Expect = 0.40
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +3
Query: 192 VYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIR----FSTKE 359
+Y++ +A TVY L G +EE + + +GT+ E+R+ K KG +IR F +
Sbjct: 813 IYDREAA---TVYVDNLPEGCSEEKLLRLCSCYGTVVEVRISK-KGGRWIRPKQNFKKRT 868
Query: 360 SATHAIVAVHNTDINGQPV 416
S H T +P+
Sbjct: 869 SGVSTNRQAHRTPPKKKPL 887
>AF077546-4|AAC26317.2| 704|Caenorhabditis elegans Hypothetical
protein T08E11.4 protein.
Length = 704
Score = 31.1 bits (67), Expect = 0.70
Identities = 42/156 (26%), Positives = 61/156 (39%), Gaps = 8/156 (5%)
Frame = +3
Query: 108 RSIRTNW--ATRKPPAPKNELNS-KPLTFDEVYNQSSASNCTV-YCGGLTTGLTEELMQK 275
+S+ NW KP E S K L D V + S V L + TE + QK
Sbjct: 486 KSLMKNWKYTFAKPTGRGFEFISWKELESDYVVDDSIVVEAHVKILNILDSPCTETMNQK 545
Query: 276 TFQPFGTIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNTDINGQPVKCSWGKESGDPNN 455
TF T+Q + K++G T + I G ++C K+ D +
Sbjct: 546 TFMLNHTVQNVSNIKERGIYTTNVETHYNIPWRIEIQRREGFFGMYLQCE--KKHFDSKD 603
Query: 456 SQAQGQLGGTAYSPFG--TAYTASGV--PPASYWYN 551
+ +L T S G ++TAS PASY Y+
Sbjct: 604 WSIEVELVLTLKSSNGQRLSFTASSTLNEPASYGYD 639
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 30.7 bits (66), Expect = 0.92
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +3
Query: 24 KGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRK 140
KG+ +V++ + + +AI+ +NG G+R ++ N A ++
Sbjct: 53 KGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQR 91
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 30.7 bits (66), Expect = 0.92
Identities = 17/97 (17%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 144 PAPKNELNSKPLTFD-EVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFK 320
P+ K+ + + P++ + +S ++ +Y + E+ + F +G + + +
Sbjct: 25 PSNKDPIFTMPISVKPKTREPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT 84
Query: 321 D----KGYAFIRFSTKESATHAIVAVHNTDINGQPVK 419
+ KG+ F+ + ES A A+H + + G+ ++
Sbjct: 85 NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIE 121
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 30.7 bits (66), Expect = 0.92
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 44 VFEKIRG-GISDHIHERAVARLQVHPHQLGHKKTTGSEE*TELQASDFRRG 193
VFE+IR S+ + + +VA+ Q+H HQ H+ T E ++ + RRG
Sbjct: 155 VFEEIRSLAWSELMEQESVAQYQLHHHQNVHEPGTHVERHEKMLSPSRRRG 205
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 30.7 bits (66), Expect = 0.92
Identities = 17/97 (17%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = +3
Query: 144 PAPKNELNSKPLTFD-EVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFK 320
P+ K+ + + P++ + +S ++ +Y + E+ + F +G + + +
Sbjct: 25 PSNKDPIFTMPISVKPKTREPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT 84
Query: 321 D----KGYAFIRFSTKESATHAIVAVHNTDINGQPVK 419
+ KG+ F+ + ES A A+H + + G+ ++
Sbjct: 85 NDRGSKGFGFVTLDSIESCEKARAALHESHVQGRIIE 121
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 204 SSASNC-TVYCGGLTTGLTEELMQKTFQPFGTIQEIRV 314
S+A N TV+ G + + E+ +++ F FGTI +R+
Sbjct: 137 SAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Frame = +3
Query: 225 VYCGGLTTGLTEELMQKTFQP-FGTIQEIRVFKDK------GYAFIRFSTKESATHAI 377
++ G L +TE+ + F G ++ +R+ +DK G+AF+ F S + A+
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 65 GISDHIHERAVARLQVHPHQLGHKKTTGSEE 157
G+ +H H++A+ ++ HP LGH TGS +
Sbjct: 382 GLLEHAHDQAIWSMKWHP--LGHILATGSND 410
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 28.7 bits (61), Expect = 3.7
Identities = 31/165 (18%), Positives = 71/165 (43%), Gaps = 15/165 (9%)
Frame = +3
Query: 15 LKSKGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNS-----KPL 179
+ G+GFV + + +A+ A+ +NG+ L + + RK + S +P
Sbjct: 32 IMKNGFGFVDFQDQRDADDAVHDLNGKELCGERVILEFPRRKVGYNEERSGSGFRGREPT 91
Query: 180 -------TFDEVYNQSSASNCTVYCGGLTTGLTEELMQKTFQPFG---TIQEIRVFKDKG 329
F Y++ ++ + L+T + + ++ + G T E ++
Sbjct: 92 FRKGGERQFSNRYSRPCSTRFRLVIDNLSTRYSWQDIKDHIRKLGIEPTYSEAHK-RNVN 150
Query: 330 YAFIRFSTKESATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQA 464
A + F++ + A+ + D+NG+ +KC+ E+ D + S++
Sbjct: 151 QAIVCFTSHDDLRDAMNKLQGEDLNGRKLKCT--DETRDRSRSRS 193
>U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform a protein.
Length = 1837
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 96 WLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSSASNCTVYC---GGLTTGLTEEL 266
W S S W TR+ NE+ +KPLT +E A +Y G L + E L
Sbjct: 411 WKISESDLRIWLTRREIRAVNEIVTKPLTKNEAVRSRDALTKMLYSHLFGWLVDKINEAL 470
Query: 267 MQK 275
+K
Sbjct: 471 NEK 473
>U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform b protein.
Length = 1839
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 96 WLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSSASNCTVYC---GGLTTGLTEEL 266
W S S W TR+ NE+ +KPLT +E A +Y G L + E L
Sbjct: 411 WKISESDLRIWLTRREIRAVNEIVTKPLTKNEAVRSRDALTKMLYSHLFGWLVDKINEAL 470
Query: 267 MQK 275
+K
Sbjct: 471 NEK 473
>U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein.
Length = 1839
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 96 WLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSSASNCTVYC---GGLTTGLTEEL 266
W S S W TR+ NE+ +KPLT +E A +Y G L + E L
Sbjct: 411 WKISESDLRIWLTRREIRAVNEIVTKPLTKNEAVRSRDALTKMLYSHLFGWLVDKINEAL 470
Query: 267 MQK 275
+K
Sbjct: 471 NEK 473
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +3
Query: 258 EELMQKTFQPFGTIQEIRVFKD-----KGYAFIRFSTKESATHAIVAVHNTDINGQPV 416
EE+ + + +G ++EI V ++ G +++F +E A A ++N NGQP+
Sbjct: 92 EEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNRWFNGQPI 149
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 3 DPQTLKSKGYGFVSYLKKSEAESAITSMN 89
D T KS+GYGFV+ ++ AE A N
Sbjct: 69 DRNTQKSRGYGFVTMKDRASAERACKDPN 97
>AF022977-3|AAB88609.1| 554|Caenorhabditis elegans Hypothetical
protein ZK994.1 protein.
Length = 554
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -3
Query: 308 DLLNSSEWLEGLLHEFFGEAGGQTSTVHRAIAS-GALIVDLVESQRLGVQFILRS 147
D++ W++ + F G++ T HR+ A+ GA++ L ES+ L Q IL S
Sbjct: 186 DVIEGCNWVDREIGNFGGDSSKITYFGHRSGATIGAILSLLPESENLFHQMILMS 240
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +3
Query: 354 KESATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPFGTAYTASGVPP 533
K + H + H + +G V G+ P Q+ T+ + + AYT G P
Sbjct: 2890 KRGSDHTHTSGHASLNSGSTVSAYSGRAIHRPPAYQSDTLSTATSENTYSYAYTPHGGPT 2949
Query: 534 ASYWYNTYPQQ 566
AS YNT P +
Sbjct: 2950 AS--YNTRPSR 2958
>Z81146-3|CAB03524.1| 496|Caenorhabditis elegans Hypothetical
protein K10D11.5 protein.
Length = 496
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 385 TATIAWVALSFVENLMKAYPLSLKTLIS*IVPNGW 281
T+T W L+F E +P + L + +VP GW
Sbjct: 34 TSTTTWYPLNFNETEPPLFPNNFNCLFNIMVPVGW 68
>Z81142-8|CAO82053.1| 370|Caenorhabditis elegans Hypothetical
protein ZK1037.13 protein.
Length = 370
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 174 PLTFDEVYNQSSASNCTVYCGGLTTG 251
PL F ++ N + S+C CGG G
Sbjct: 26 PLVFPQMSNSETTSDCCSVCGGAPNG 51
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 18 KSKGYGFVSYLKKSEAESAITSMNGQWLGSRSI 116
KSKG + Y EA A++ +NGQ L R++
Sbjct: 226 KSKGVCVIQYTHPIEAVQAVSMLNGQRLFDRNL 258
>AC024859-7|AAK29968.1| 550|Caenorhabditis elegans Hypothetical
protein Y71H2AM.13 protein.
Length = 550
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 345 FSTKESATHAIVAVHNTDINGQPVKCSWGKESGDPNNSQAQGQLGGTAYSPF 500
++T +S+ VA+H+ + VK + G +GDPNN GQ G A F
Sbjct: 163 WTTGDSSIPDNVALHDMVFALKWVKENIGLFNGDPNNITLMGQSAGGASVDF 214
>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 5
protein.
Length = 1434
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 48 LKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSK 173
L + + + TS +G L + + RTN +R PPAP+ N +
Sbjct: 1094 LASAGRKKSFTSSSGDLLNAPN-RTNGQSRTPPAPRKAANRR 1134
>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
protein Y38C1AB.4 protein.
Length = 1393
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 48 LKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSK 173
L + + + TS +G L + + RTN +R PPAP+ N +
Sbjct: 1053 LASAGRKKSFTSSSGDLLNAPN-RTNGQSRTPPAPRKAANRR 1093
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 27.5 bits (58), Expect = 8.6
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Frame = +3
Query: 237 GLTTGLTEELMQKTFQPFGTIQ--EIRVFKD---KGYAFIRFSTKESATHAIVAVHNTDI 401
G+ T+E QK F+ GT+ EI+ D KG+ F+R S+ + ++A+ I
Sbjct: 179 GVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS-VGEQNKVLAIPQHMI 237
Query: 402 NGQ--PVKCSWGKE-SGDPNNSQ 461
+G+ VK G++ G P+ S+
Sbjct: 238 DGRRCDVKVPDGRDKQGRPSISR 260
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 222 TVYCGGLTTGLTEELMQKTFQPFGTIQEIRV-FKDKGY 332
T+Y G L + +TE+ + F G++ + +V F + GY
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDELGY 84
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +3
Query: 24 KGYGFVSYLKKSEAESAITSMNGQWLGSRSIRTNWATRKPPAP 152
+GYG+V Y +AE +I M+G + ++ + P
Sbjct: 175 RGYGYVEYDNLEDAEKSIKHMDGGQIDGMAVHVEMTIGRQSVP 217
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 222 TVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAF 338
TV+ GGL +T E + + F FG + + + D+ Y +
Sbjct: 320 TVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 222 TVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAF 338
TV+ GGL +T E + + F FG + + + D+ Y +
Sbjct: 320 TVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AF000194-1|AAK39376.4| 386|Caenorhabditis elegans Hypothetical
protein ZC328.2 protein.
Length = 386
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 4/26 (15%)
Frame = +2
Query: 236 RSDH-RPHRRTHAEDLP---AIRNYS 301
RSDH R HRRTH ++ P + NYS
Sbjct: 286 RSDHLRTHRRTHTDEKPYHCCVCNYS 311
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 222 TVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAF 338
TV+ GGL +T E + + F FG + + + D+ Y +
Sbjct: 106 TVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 144
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 222 TVYCGGLTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAF 338
TV+ GGL +T E + + F FG + + + D+ Y +
Sbjct: 320 TVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,237,426
Number of Sequences: 27780
Number of extensions: 367371
Number of successful extensions: 1442
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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