Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3465
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          27   0.48 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   4.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   7.9  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 27.5 bits (58), Expect = 0.48
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = -3

Query: 718  SQTQPTEFLAGSSPVGRV-SDPVVDSAKHGFLLGFVLATSSGLSPVSSPTNVRVTLK*P* 542
            S+T+P     G SP     + PV     +G   G    TSS   P  SPT+ R+TL  P 
Sbjct: 1096 SETEPDNSPMGGSPRPETPAFPVTPRTPYGLSNG----TSSPALPPKSPTSQRITL--PG 1149

Query: 541  GYQLR 527
             Y+ R
Sbjct: 1150 RYEAR 1154


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 638 ARLLARVRVSNVIRFEPRELTYKR 567
           A   AR+ V+N+ +FE REL  ++
Sbjct: 790 AEFCARIGVANIRQFEERELVLQQ 813


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 131 DVYWWT*LI 105
           DVYWWT LI
Sbjct: 348 DVYWWTPLI 356


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,293
Number of Sequences: 2352
Number of extensions: 12552
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)