Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3463
         (382 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p pro...    31   0.66 
AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA...    31   0.66 
AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD...    30   1.2  
AY061553-1|AAL29101.1|  595|Drosophila melanogaster LP08894p pro...    28   3.5  
AE014297-1757|AAF54987.1|  595|Drosophila melanogaster CG9307-PA...    28   3.5  
AY094780-1|AAM11133.1|  924|Drosophila melanogaster LD11626p pro...    28   4.7  
AF017647-1|AAC47802.1|  924|Drosophila melanogaster origin recog...    28   4.7  
AE014298-2183|AAN09358.1|  119|Drosophila melanogaster CG32586-P...    28   4.7  
AE013599-441|AAF59236.1|  924|Drosophila melanogaster CG10667-PA...    28   4.7  
BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p pro...    27   6.2  
AY069177-1|AAL39322.1|  640|Drosophila melanogaster GH22493p pro...    27   6.2  
AE014296-2139|AAF49919.2|  640|Drosophila melanogaster CG10704-P...    27   6.2  
AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-P...    27   6.2  
AF217401-1|AAF73386.1|   64|Drosophila melanogaster unknown prot...    27   8.2  

>AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p protein.
          Length = 2486

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 340  VVEALPSA-STLMAQANPPRQSKKVQPTPAPRGRTSAGAPTISRPTSGITTL 188
            VV  +PSA ST ++ +NP        P  A    +S+ A   S P SG++TL
Sbjct: 1361 VVSVVPSANSTALSMSNPHISHSHHVPAYASGAFSSSAAAGTSTPNSGLSTL 1412


>AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA
            protein.
          Length = 2486

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 340  VVEALPSA-STLMAQANPPRQSKKVQPTPAPRGRTSAGAPTISRPTSGITTL 188
            VV  +PSA ST ++ +NP        P  A    +S+ A   S P SG++TL
Sbjct: 1361 VVSVVPSANSTALSMSNPHISHSHHVPAYASGAFSSSAAAGTSTPNSGLSTL 1412


>AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD
            protein.
          Length = 2351

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -1

Query: 316  STLMAQANPPRQSKKVQPTPAPRGRTSAGAPTISR-PTSGITTL 188
            S+ + QA+P   S  V+P P P  +   GAP+ S+ P+ G + L
Sbjct: 940  SSYLPQASPHYHSGYVRPPPTPTHQFGGGAPSGSKTPSQGSSPL 983


>AY061553-1|AAL29101.1|  595|Drosophila melanogaster LP08894p
           protein.
          Length = 595

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 100 PVPTVQNSAPQPTDPENMEVTENSTPAHTIPS 5
           PVPTV +S P+PT  +  +  + +T   T P+
Sbjct: 462 PVPTVGSSTPKPTTKKPKKPKKTTTTTTTTPA 493


>AE014297-1757|AAF54987.1|  595|Drosophila melanogaster CG9307-PA
           protein.
          Length = 595

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 100 PVPTVQNSAPQPTDPENMEVTENSTPAHTIPS 5
           PVPTV +S P+PT  +  +  + +T   T P+
Sbjct: 462 PVPTVGSSTPKPTTKKPKKPKKTTTTTTTTPA 493


>AY094780-1|AAM11133.1|  924|Drosophila melanogaster LD11626p
           protein.
          Length = 924

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 277 KKVQPTPAPRGRTSAGAPTISRPTSGITT 191
           K VQ TP    R+S    T + P+ GITT
Sbjct: 484 KSVQKTPTRTRRSSTTTKTATTPSKGITT 512


>AF017647-1|AAC47802.1|  924|Drosophila melanogaster origin
           recognition complex subunit1 protein.
          Length = 924

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 277 KKVQPTPAPRGRTSAGAPTISRPTSGITT 191
           K VQ TP    R+S    T + P+ GITT
Sbjct: 484 KSVQKTPTRTRRSSTTTKTATTPSKGITT 512


>AE014298-2183|AAN09358.1|  119|Drosophila melanogaster CG32586-PA
           protein.
          Length = 119

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +2

Query: 2   LAWYRMGRSGVFCDL 46
           LA++R GRSGVFC+L
Sbjct: 100 LAFFRGGRSGVFCNL 114


>AE013599-441|AAF59236.1|  924|Drosophila melanogaster CG10667-PA
           protein.
          Length = 924

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 277 KKVQPTPAPRGRTSAGAPTISRPTSGITT 191
           K VQ TP    R+S    T + P+ GITT
Sbjct: 484 KSVQKTPTRTRRSSTTTKTATTPSKGITT 512


>BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p protein.
          Length = 1872

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -1

Query: 328  LPSASTLMAQANPPRQSKKVQPTPAPRGRTSAGAPTISRPTSGIT 194
            +P+ ST +A  +PP  SKK   +P  + +     P  ++   G+T
Sbjct: 1038 IPTRSTKVASKSPPSSSKKRSKSP-EKPKAMGSTPKSNKVGKGVT 1081


>AY069177-1|AAL39322.1|  640|Drosophila melanogaster GH22493p
           protein.
          Length = 640

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 377 PPSLFPLRSVCXXXXGTAIGVYADGTGQPATAVKESPT 264
           P ++ P+ +V        +G  A G GQPA     SPT
Sbjct: 38  PGAIMPMAAVPLPSHLQLLGSSAGGVGQPAAITPVSPT 75


>AE014296-2139|AAF49919.2|  640|Drosophila melanogaster CG10704-PA
           protein.
          Length = 640

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 377 PPSLFPLRSVCXXXXGTAIGVYADGTGQPATAVKESPT 264
           P ++ P+ +V        +G  A G GQPA     SPT
Sbjct: 38  PGAIMPMAAVPLPSHLQLLGSSAGGVGQPAAITPVSPT 75


>AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-PA
            protein.
          Length = 1831

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -1

Query: 328  LPSASTLMAQANPPRQSKKVQPTPAPRGRTSAGAPTISRPTSGIT 194
            +P+ ST +A  +PP  SKK   +P  + +     P  ++   G+T
Sbjct: 1036 IPTRSTKVASKSPPSSSKKRSKSP-EKPKAMGSTPKSNKVGKGVT 1079


>AF217401-1|AAF73386.1|   64|Drosophila melanogaster unknown
           protein.
          Length = 64

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -1

Query: 322 SASTLMAQANPPRQSKKVQPTPAPRGRTSAGAPTIS 215
           S +T     NP   SK V P    +GRTS+  P ++
Sbjct: 25  SKATATDTRNPSHHSKLVFPPAQGKGRTSSSIPIVN 60


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,194,890
Number of Sequences: 53049
Number of extensions: 297578
Number of successful extensions: 1909
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)