Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3462
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-591|AAF47735.1|  140|Drosophila melanogaster CG14966-PA...    31   0.90 
AE014297-3266|AAF56092.1|  768|Drosophila melanogaster CG17111-P...    29   4.8  
X95453-2|CAA64723.1|  980|Drosophila melanogaster homologous to ...    29   6.3  
AE014297-1114|AAO41538.2|  981|Drosophila melanogaster CG3985-PF...    29   6.3  
AE014297-1112|AAF54506.3| 1041|Drosophila melanogaster CG3985-PD...    29   6.3  

>AE014296-591|AAF47735.1|  140|Drosophila melanogaster CG14966-PA
           protein.
          Length = 140

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 427 FLSAKSDTMSVRSGPSGAGVGNVENDGRSRPIFEKSP 317
           F S  +  MS   G S AGV + +ND ++ P  E SP
Sbjct: 5   FTSVNAQIMSKSKGKSKAGVESAKNDAKAMPAKEASP 41


>AE014297-3266|AAF56092.1|  768|Drosophila melanogaster CG17111-PA
           protein.
          Length = 768

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 410 AFCGQKCRFYCQG*SRHH*NQFHEQNYLTH 499
           A C  + +FYCQG S ++ NQ      L H
Sbjct: 268 AMCSHEAKFYCQGVSFYYVNQLSLSECLLH 297


>X95453-2|CAA64723.1|  980|Drosophila melanogaster homologous to
           synapsin I protein.
          Length = 980

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -1

Query: 421 SAKSDTMSVRSGPSGAGVGNVENDGRSRPIFEKSPYKCFSLRNVSTNA 278
           S  +DT++ R+G     V N E   R  P F+K P K  S  ++ T++
Sbjct: 623 SRNTDTLTERAGAGYQPVTNYEQQERVNP-FDKEPSKSGSAASIHTSS 669


>AE014297-1114|AAO41538.2|  981|Drosophila melanogaster CG3985-PF,
           isoform F protein.
          Length = 981

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -1

Query: 421 SAKSDTMSVRSGPSGAGVGNVENDGRSRPIFEKSPYKCFSLRNVSTNA 278
           S  +DT++ R+G     V N E   R  P F+K P K  S  ++ T++
Sbjct: 624 SRNTDTLTERAGAGYQPVTNYEQQERVNP-FDKEPSKSGSAASIHTSS 670


>AE014297-1112|AAF54506.3| 1041|Drosophila melanogaster CG3985-PD,
           isoform D protein.
          Length = 1041

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -1

Query: 421 SAKSDTMSVRSGPSGAGVGNVENDGRSRPIFEKSPYKCFSLRNVSTNA 278
           S  +DT++ R+G     V N E   R  P F+K P K  S  ++ T++
Sbjct: 684 SRNTDTLTERAGAGYQPVTNYEQQERVNP-FDKEPSKSGSAASIHTSS 730


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,946,647
Number of Sequences: 53049
Number of extensions: 435162
Number of successful extensions: 1166
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)