Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3458
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical ... 175 3e-44
AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical ... 175 3e-44
AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical ... 168 2e-42
AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical ... 30 1.1
Z75543-1|CAA99867.1| 314|Caenorhabditis elegans Hypothetical pr... 28 4.4
U67950-1|AAP13771.1| 465|Caenorhabditis elegans Hypothetical pr... 28 4.4
AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical ... 28 4.4
Z81537-3|CAB04374.1| 348|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical pr... 28 5.8
U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical pr... 28 5.8
U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL117202-2|CAB55092.1| 302|Caenorhabditis elegans Hypothetical ... 28 5.8
AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical ... 27 7.6
AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein. 27 7.6
>AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18a protein.
Length = 299
Score = 175 bits (425), Expect = 3e-44
Identities = 90/158 (56%), Positives = 110/158 (69%), Gaps = 4/158 (2%)
Frame = +1
Query: 133 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 303
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 304 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 480
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 481 LQRLYGKHIITVANEIGRLPPTFLDASQLATAILTSGY 594
LQRLY I+ NEIGR PP+F DAS A AIL SGY
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGY 180
>AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18b protein.
Length = 313
Score = 175 bits (425), Expect = 3e-44
Identities = 90/158 (56%), Positives = 110/158 (69%), Gaps = 4/158 (2%)
Frame = +1
Query: 133 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 303
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 304 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 480
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 481 LQRLYGKHIITVANEIGRLPPTFLDASQLATAILTSGY 594
LQRLY I+ NEIGR PP+F DAS A AIL SGY
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGY 180
>AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18c protein.
Length = 200
Score = 168 bits (409), Expect = 2e-42
Identities = 87/154 (56%), Positives = 107/154 (69%), Gaps = 4/154 (2%)
Frame = +1
Query: 133 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 303
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 304 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 480
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 481 LQRLYGKHIITVANEIGRLPPTFLDASQLATAIL 582
LQRLY I+ NEIGR PP+F DAS A AIL
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAIL 176
>AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical
protein K09H9.2 protein.
Length = 443
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 253 LKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIR 411
L RP+ + + + E +P DP F+ ++ D + GA G S IR
Sbjct: 63 LSKNRPFDQAMNKTMTKMEFSPDYSDPSSEFMLLSVDESVIGAFSEGQSLTIR 115
>Z75543-1|CAA99867.1| 314|Caenorhabditis elegans Hypothetical
protein K01D12.1 protein.
Length = 314
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 88 PVRSVPTFCKFYGCLSVKFTSRRKN 14
PV PTF FY C+ K S R N
Sbjct: 52 PVEGTPTFKAFYNCVYPKLASLRGN 76
>U67950-1|AAP13771.1| 465|Caenorhabditis elegans Hypothetical
protein T01B6.3a protein.
Length = 465
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = -1
Query: 582 ENGSGQLTC--VQESRWETSNLISNS 511
E GSG + C VQ S WE +N+IS++
Sbjct: 233 EIGSGNIICSGVQNSVWEAANIISHN 258
>AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical
protein Y97E10B.1 protein.
Length = 588
Score = 28.3 bits (60), Expect = 4.4
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Frame = -1
Query: 537 ETSNLISNSNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFRYTSVYSSAQTSVR 358
E N ++ D L +++ARFI+ D DVL R A T A+ F+ +
Sbjct: 277 EFRNQAASQTDCLL--QFKESARFITFLDLDDVLIPRLAPTYAEEFQKLMDGKKKLAYIF 334
Query: 357 GH-SNKQLLGVIFG-RCNLSP-FIELYCTFTIGTSSFQVTLSTGVFSS*HHLHGLCDFLD 187
H N + FG + +L F L C + S++Q GV H+ L F D
Sbjct: 335 YHKENYDAVTTRFGSKFSLKKMFGSLACKHKVNESNYQ---DVGVQMGKRHIIRLSSFKD 391
>Z81537-3|CAB04374.1| 348|Caenorhabditis elegans Hypothetical
protein F41D3.3 protein.
Length = 348
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/62 (20%), Positives = 33/62 (53%)
Frame = -1
Query: 567 QLTCVQESRWETSNLISNSNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFRYTS 388
Q+ V++ R++ + I + N+++++Q + H +D+L A+ + HF++
Sbjct: 146 QVESVEKQRFKNALQIQSVNELVTLQRTSTDSCL--HCPGVDILDRESAQALRKHFQFAD 203
Query: 387 VY 382
V+
Sbjct: 204 VW 205
>Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical
protein T01B7.6 protein.
Length = 765
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = -2
Query: 470 DLSPTQITLMFSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGGVTSALS 297
D T M + G LR + TPV +PL +N LGSS G ++S S
Sbjct: 544 DFKMTSSIPMTNGLGHLRLGSVWSGTPVEAKQEEPLHYFQQQDNFLGSSFGPISSTFS 601
>U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical
protein C10G6.1b protein.
Length = 569
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 328 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 441
+PK+L + +RGL VS +++NRL+E G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical
protein C10G6.1a protein.
Length = 574
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 328 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 441
+PK+L + +RGL VS +++NRL+E G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>AL117202-2|CAB55092.1| 302|Caenorhabditis elegans Hypothetical
protein Y47D3A.2 protein.
Length = 302
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -1
Query: 552 QESRWETSNLISNSNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVAD 406
Q +W+ + ++ SV S+Q F T LD LST A V D
Sbjct: 186 QLEQWKMTKSLNAHGGKFSVDSIQHLFHFTEFTITLDTLSTEDAINVRD 234
>AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical
protein Y44F5A.1 protein.
Length = 383
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +1
Query: 451 ICVGDKSRGILQRLYGKHIITVANEIGRLPPTFLDASQLATA 576
+CV D G R K +V I LPPT L + QLATA
Sbjct: 75 LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116
>AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein.
Length = 383
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +1
Query: 451 ICVGDKSRGILQRLYGKHIITVANEIGRLPPTFLDASQLATA 576
+CV D G R K +V I LPPT L + QLATA
Sbjct: 75 LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,471,003
Number of Sequences: 27780
Number of extensions: 347553
Number of successful extensions: 981
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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