Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2495
(706 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0236 - 27751430-27751600,27752029-27752278,27753131-27754050 81 6e-16
10_03_0019 - 7123502-7123673,7124145-7124226,7124228-7124394,712... 77 1e-14
06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499 64 8e-11
05_07_0091 + 27640863-27641788,27643186-27643444,27643993-276440... 64 1e-10
04_04_1387 - 33172555-33173053,33173136-33173872 63 2e-10
01_01_0400 + 3038298-3038863,3039057-3039411,3039504-3040232 51 8e-07
04_01_0011 + 207319-207605,207935-208184,208559-208729 50 1e-06
05_01_0175 + 1219120-1219793,1220234-1220267 50 2e-06
03_02_0620 + 9916684-9917336,9919219-9919492,9920502-9920585,992... 49 3e-06
07_03_1097 + 23938079-23938570 33 0.29
09_06_0099 - 20854828-20855117,20855231-20855423,20855507-208556... 32 0.51
01_01_0313 + 2549946-2550095,2550824-2550832 30 1.6
08_01_0598 + 5257973-5258090,5258253-5258809 30 2.1
09_04_0132 - 14921798-14922616,14922736-14922900 29 2.7
08_01_0590 + 5232728-5232848,5233026-5233582 29 2.7
08_02_0771 - 21028295-21028753 29 3.6
08_01_0584 + 5180531-5180651,5180816-5181354 29 3.6
04_04_1457 - 33741048-33741146,33741647-33741760,33741938-337420... 28 6.3
04_03_0973 + 21359391-21359885,21359984-21360169,21361054-21361344 28 6.3
08_02_0530 + 18244933-18245217,18245309-18245383,18246176-182462... 28 8.3
03_02_0720 + 10662494-10663564 28 8.3
>01_06_0236 - 27751430-27751600,27752029-27752278,27753131-27754050
Length = 446
Score = 81.4 bits (192), Expect = 6e-16
Identities = 64/232 (27%), Positives = 114/232 (49%), Gaps = 20/232 (8%)
Frame = +2
Query: 38 KMIYYITPTYPRPEQIPELTRLGHTLMHVPR-IHWIIADDQSLCSTNVLNLLRRTGLPFT 214
K + IT T RP Q L RL H L VP + WI+A+ S +LR +G+ +
Sbjct: 193 KHLIIITTTSVRPHQAYYLNRLAHVLKDVPPPLLWIVAE-WPYQSRETAEILRSSGIMYR 251
Query: 215 HISSPKPYVYKGTNFPR-GVSNRRAALVWLRENVREGVMYFGDDDNTVDLQLFDEIRRTK 391
H+ + TN + V + A+ ++++ +G+++F D++ LF+E+R+ +
Sbjct: 252 HLICNR----NTTNIRKIVVCQKNNAIFHIKKHRLDGIVHFADEERAYSADLFEEMRKIR 307
Query: 392 KVSMFPVGL-IG-DYGI--SAPIIKDGKVVAFFDSWPG--SRTFPVDMAGFAVNIEFL-- 547
+ +PV + +G Y + P+ K +V + + SR FP+ +GFA N L
Sbjct: 308 RFGTWPVAIHVGTKYRVVLEGPVCKGNQVTGWHTNQRRGVSRRFPIGFSGFAFNSTILWD 367
Query: 548 -----TPT--ATMPYSAGH---EEDKFLMSLGIKLDDIEPLADNCSKVLVWH 673
+PT + + +S G +E +F+ L +E L DNC++V+VW+
Sbjct: 368 PQRWNSPTLESIIVHSGGRGGLQESRFIEKLVEDESQMEGLGDNCTRVMVWN 419
>10_03_0019 -
7123502-7123673,7124145-7124226,7124228-7124394,
7124569-7125182
Length = 344
Score = 77.4 bits (182), Expect = 1e-14
Identities = 59/197 (29%), Positives = 89/197 (45%), Gaps = 19/197 (9%)
Frame = +2
Query: 20 ANKSDLKMIYYITPTYPRPEQIPELTRLGHTLMHVPR-IHWIIADDQSLCSTNVLNLLRR 196
A + K++ +TPT RP Q L RL HTL P + W++ + + + + LLR
Sbjct: 71 AAAEERKLLLVVTPTRARPLQAYYLRRLAHTLRLAPSPLLWLVVESGA-ATRDTAALLRG 129
Query: 197 TGLPFTHISSPKPYVYKGTNFPRG-----------VSNRRAALVWLRENVREGVMYFGDD 343
G+ + H+SSP P + RG R AL + + G++YF D+
Sbjct: 130 CGVMYRHLSSPVPDAPQDRPRRRGRRQDRPAVDSRARQRNTALDHIEHHRLHGIVYFADE 189
Query: 344 DNTVDLQLFDEIRRTKKVSMFPVGLIGDYG----ISAPIIKDGKVVAFF--DSWPGSRTF 505
DN L LF +R + +PV + + P+ + +VV + D R F
Sbjct: 190 DNVYSLDLFYHLRDIRSFGTWPVATLAPGKSKTILQGPVCEGSRVVGWHTTDRSKNQRRF 249
Query: 506 PVDMAGFAVN-IEFLTP 553
VDM+GFA N I F TP
Sbjct: 250 HVDMSGFAFNSISFGTP 266
>06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499
Length = 524
Score = 64.5 bits (150), Expect = 8e-11
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Frame = +2
Query: 44 IYYITPTYPRPEQIPELTRLGHTLMHVPR-IHWIIADDQSLCSTNVLNLLRRTGLPFTHI 220
+ +TPTY R Q LT L H+L +VP + WI+ + + +LL R+ L HI
Sbjct: 198 VLVVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVEAGGTTNATA-SLLARSDLTIVHI 256
Query: 221 SSPKPYVYKGTNFPRGVSNRRA-ALVWLRENVREGVMYFGDDDNTVDLQLFDEIRRTKKV 397
P + + + R AL +RE +GV+ F DD N L+LFDE+++ + +
Sbjct: 257 PFPDRMPHDWADRHATENRMRLHALRVIRERKMDGVIVFADDSNVHSLELFDEVQKVQWM 316
Query: 398 SMFPVGLIGDYG 433
VG++ G
Sbjct: 317 GAVSVGILAHTG 328
>05_07_0091 +
27640863-27641788,27643186-27643444,27643993-27644070,
27644324-27644398
Length = 445
Score = 64.1 bits (149), Expect = 1e-10
Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 25/235 (10%)
Frame = +2
Query: 38 KMIYYITPTYPRPEQIPELTRLGHTLMHVPR-IHWIIAD--DQSLCSTNVLNLLRRTGLP 208
K++ +T T RP+Q L RL H L V + W++ + DQS + +L R +G+
Sbjct: 195 KLLIIVTITTVRPQQAYYLNRLAHVLKTVQSPLLWLVVEWPDQSFQTAEIL---RSSGVM 251
Query: 209 FTHISSPKPYVYKGTNFPR-GVSNRRAALVWLRENVREGVMYFGDDDNTVDLQLFDEIRR 385
+ H+ K T+ + V R A+ ++++ +G+M+F D++ + +F+E+R+
Sbjct: 252 YRHLICRK----NTTSVRKIAVCQRNTAIYHIKKHRLDGIMHFADEERSYMSDVFEEMRK 307
Query: 386 TKKVSMFPV----GLIGDYGISAPIIKDGKVVAF-----FDSWPGSRTFPVDMAGFAVNI 538
++ +PV G+ + PI K +V + R FPV +GFA N
Sbjct: 308 IRRFGAWPVAIHTGIKYRVVLEGPICKGNRVTGWNTIQNIQKKSAVRRFPVGFSGFAFNS 367
Query: 539 EFL---------TPTATMPYSAGH---EEDKFLMSLGIKLDDIEPLADNCSKVLV 667
L + + +S G +E +F+ L IE L ++C++V+V
Sbjct: 368 TMLWDPERWNRPPMDSVIVHSGGRGGLQESRFIEKLVKHERQIEGLPEDCNRVMV 422
>04_04_1387 - 33172555-33173053,33173136-33173872
Length = 411
Score = 63.3 bits (147), Expect = 2e-10
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 17/182 (9%)
Frame = +2
Query: 53 ITPTYPRPEQIPELTRLGHTLMHVPR-IHWIIADDQSLCSTNVLNLLRRTGLPFTHISSP 229
+TPT Q+P LT + HTL V + WI+ + + V +L R+ L F HI+ P
Sbjct: 175 VTPTTTSALQVPSLTSMAHTLRLVDGPLTWIVVEPEHHTDA-VAAVLSRSNLNFLHITGP 233
Query: 230 KPYVYKGTNFPRGVSNRRAALVWLRENVREGVMYFGDDDNTVDLQLFDEIRRTKKVSMFP 409
+ R AL +R+ +GV+ F D+++ + +LFDE ++ K V P
Sbjct: 234 DSSTSR---------LRMHALREIRKRKMDGVVVFADENSILRTELFDEAQKVKSVGAVP 284
Query: 410 VGLIG-DYGISAPIIK------DGKVVAFFDS----WPGSR-----TFPVDMAGFAVNIE 541
VG++G D G S ++ +GK+V + S P +R + ++ AGF VN +
Sbjct: 285 VGVLGEDEGTSETFLQAPSCDAEGKLVGYHVSEETMLPANRGDMLLSSRLEWAGFVVNAQ 344
Query: 542 FL 547
L
Sbjct: 345 AL 346
>01_01_0400 + 3038298-3038863,3039057-3039411,3039504-3040232
Length = 549
Score = 51.2 bits (117), Expect = 8e-07
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Frame = +2
Query: 32 DLKMIYYITPTYPRPE------QIPELTRLGHTLMHV-PRIHWIIADDQSLCST-NVLNL 187
+L ++ +T T P + Q LTRLGHTL V P + WI+ ++ +T +N
Sbjct: 63 ELDLLLIVTVTRPDDDDDDGMSQEASLTRLGHTLRLVEPPLLWIVVGAENTTATARAVNA 122
Query: 188 LRRTGLPFTHISSPKPYVYKGTNFPRGVS---NRRAALVWLRENVREGVMYFGDDDNTVD 358
LR T + F H++ Y + P G AL ++ + GV++F + D
Sbjct: 123 LRGTRVMFRHLT----YAAENFTGPAGDEVDYQMNVALSHIQLHRLPGVVHFAAASSVYD 178
Query: 359 LQLFDEIRRTKKVSMFPVGLI 421
L+ F ++R+T+ ++ +P+ +
Sbjct: 179 LRFFQQLRQTRGIAAWPIATV 199
>04_01_0011 + 207319-207605,207935-208184,208559-208729
Length = 235
Score = 50.4 bits (115), Expect = 1e-06
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 20/211 (9%)
Frame = +2
Query: 101 LGHTL--MHVPRIHWIIADDQSLCSTNVLNLLRRTGLPFTHISSPKPYVYKGTNFPRGVS 274
+ HTL +H + WI+ + + LRRT + ++ +F
Sbjct: 1 MAHTLRLLHDSPLLWIVVQAGNP-TPEAAAALRRTAVLHRYVGCCHNINASAPDFRPHQI 59
Query: 275 NRRAALVWLRENVREGVMYFGDDDNTVDLQLFDEIRRTKKVSMFPVGLIGDYG----ISA 442
N AAL + + +GV+YF D++ L LF +R+ ++ + +PV I + +
Sbjct: 60 N--AALDIVDNHRLDGVLYFADEEGVYSLHLFHHLRQIRRFATWPVPEISQHTNEVVLQG 117
Query: 443 PIIKDGKVVAFFDSWPGS--RTFPVDMAGFAVNIEFLTPTATMPY----SAGHEE----- 589
P+ K G+VV + + G+ R F + M+GFA N L + S H E
Sbjct: 118 PVCKQGQVVGWHTTHDGNKLRRFHLAMSGFAFNSTMLWDPKLRSHLAWNSIRHPEMVKES 177
Query: 590 ---DKFLMSLGIKLDDIEPLADNCSKVLVWH 673
F+ L +E + +CS+++ WH
Sbjct: 178 LQGSAFVEQLVEDESQMEGIPADCSQIMNWH 208
>05_01_0175 + 1219120-1219793,1220234-1220267
Length = 235
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Frame = +2
Query: 38 KMIYYITPTY-PRPEQIPELTRLGHTLMHV-PRIHWIIADDQSLCSTNVLNLLRRTGLPF 211
+M+ +T T R + EL RL HTL V P + W++ + + + +LR TG+ +
Sbjct: 108 RMLIVVTTTRGERRRRRGELLRLAHTLRLVRPPVVWVVVEPAADAAATA-EVLRGTGVMY 166
Query: 212 THISSPKPYVYKGTNFPRGVSNRRAALVWLRENVREGVMYFGDDDNTVDLQLFDEIRR 385
H++ +P T + R AAL + ++ GV++F D D FDEIR+
Sbjct: 167 RHLAF-RPEENFTTADAEAHAQRNAALAHVEKHRLSGVVHFADAAGVYDAHFFDEIRQ 223
>03_02_0620 +
9916684-9917336,9919219-9919492,9920502-9920585,
9921295-9921356,9921699-9921762
Length = 378
Score = 49.2 bits (112), Expect = 3e-06
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 6/150 (4%)
Frame = +2
Query: 92 LTRLGHTLMHVPR-IHWIIADDQSLCSTNVLNLLRRTGLPFTHISSPKPYVYKGTNFPRG 268
LTR+ HTL VP + W++ + + LLR TGL + H++ + +
Sbjct: 118 LTRMAHTLRLVPPPLLWVVVEANPDVAATA-RLLRTTGLMYRHLTYKDNFTVADAAAGKE 176
Query: 269 VSNRR-AALVWLRENVREGVMYFGDDDNTVDLQLFDEIRRTKKVSMFPVGLIGD----YG 433
++R AL + + GV+ F +T DL+ FD++R+ + +PV +
Sbjct: 177 RHHQRNVALGHIEHHRLAGVVLFAGLGDTFDLRFFDQLRQIRTFGAWPVATMSQNERKVV 236
Query: 434 ISAPIIKDGKVVAFFDSWPGSRTFPVDMAG 523
+ P V +F + T PV + G
Sbjct: 237 VQGPACSSSSVAGWFSMDLSNATSPVAVGG 266
>07_03_1097 + 23938079-23938570
Length = 163
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 278 RRAALVWLRENVREGVMYFGDDDNTVDLQLFDEIRRTKKV 397
R AAL + ++ GV++F D D FD+IR+T+ V
Sbjct: 106 RNAALAHVEKHYFPGVVHFADAAGVYDAHFFDKIRQTESV 145
>09_06_0099 -
20854828-20855117,20855231-20855423,20855507-20855668,
20856384-20856497
Length = 252
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 216 CVNGKPVRLSKLRTLVEHKDWSSAMIQCIRGTCINVWPSLVNS-GICSGL 70
C + P ++KL ++ + + + I+C R +N W S NS G+CSGL
Sbjct: 82 CNSDNPFDINKLDSIENNLNHYWSNIKCPRTDGVNSWKSEWNSYGVCSGL 131
>01_01_0313 + 2549946-2550095,2550824-2550832
Length = 52
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 299 LRENVREGVMYFGDDDNTVDLQLFDEIRRTK 391
+R+ EGV+ F D+++ + +LFDE+++ K
Sbjct: 22 IRKREMEGVVVFADENSILRTELFDEVQKGK 52
>08_01_0598 + 5257973-5258090,5258253-5258809
Length = 224
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +2
Query: 167 STNVLNLLRRTGLPFTHISSPK-PYVYKGTNFPRGVSNRRAALVWLRENVREGVMYFGDD 343
+ ++N+++ GL IS + Y G N P ++ RA + V EG +Y G
Sbjct: 76 NVTLINVMQIPGLNTLGISIARIDYAPLGQNPPH--THPRATEIL---TVLEGTLYVGFV 130
Query: 344 DNTVDLQLFDEIRRTKKVSMFPVGLI 421
+ D + F ++ V +FPVGLI
Sbjct: 131 TSNPDNKFFSKVLNKGDVFVFPVGLI 156
>09_04_0132 - 14921798-14922616,14922736-14922900
Length = 327
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 141 SLQTTSLCVQPMFSIYLGGRACHSHIFPVQSHTCTKVQTSRVAFRTD 281
S++T + C + + GG A H+ F TC +++ SRV R D
Sbjct: 112 SMETANSC-DANSNRHQGGDADHAESFAADDGTCRRIKVSRVCRRID 157
>08_01_0590 + 5232728-5232848,5233026-5233582
Length = 225
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 167 STNVLNLLRRTGLPFTHISSPK-PYVYKGTNFPRGVSNRRAALVWLRENVREGVMYFGDD 343
+ ++N+++ GL IS + Y G N P ++ RA + V EG +Y G
Sbjct: 77 NVTLINVMQIPGLNTLGISIARIDYAPLGQNPPH--THPRATEIL---TVLEGTLYVGFV 131
Query: 344 DNTVDLQLFDEIRRTKKVSMFPVGLI 421
+ + LF ++ + V +FPVGLI
Sbjct: 132 TSNPNNTLFSKVLKKGDVFVFPVGLI 157
>08_02_0771 - 21028295-21028753
Length = 152
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 478 RLMAGV*NIPCRYGRIRCQHRVPDSDGHNALLSWP 582
R GV ++ ++ R QHR P + +ALL+WP
Sbjct: 13 RRRRGVLDLEAQFAFFRSQHRHPVNAAAHALLAWP 47
>08_01_0584 + 5180531-5180651,5180816-5181354
Length = 219
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2
Query: 176 VLNLLRRTGLPFTHISSPK-PYVYKGTNFPRGVSNRRAALVWLRENVREGVMYFGDDDNT 352
++N++ GL IS + Y G N P ++ RA ++ V EG +Y G +
Sbjct: 82 LINVMEIPGLNTLGISIVRVDYAPLGLNPPH--THPRATEIF---TVLEGTLYVGFVTSN 136
Query: 353 VDLQLFDEIRRTKKVSMFPVGLI 421
D +LF ++ V +FP GLI
Sbjct: 137 PDNKLFSKVLNKGDVFVFPKGLI 159
>04_04_1457 - 33741048-33741146,33741647-33741760,33741938-33742052,
33742154-33742560,33743342-33743476,33743576-33743970,
33744225-33744916,33745014-33745097,33745195-33745286,
33745374-33745457,33745535-33745714,33746258-33746302,
33746399-33746692,33747199-33747585,33747713-33747899,
33748042-33748118,33748936-33749067,33749315-33749416,
33749744-33749827,33749902-33749992,33750105-33750178,
33750644-33750664,33751433-33751477,33752427-33752561,
33752693-33752752
Length = 1376
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 2 NHNEAIANKSDLKMIYYITPTYPRPEQI 85
+H EAIA + LK+I + +PRP+Q+
Sbjct: 1291 DHREAIARLTLLKLIKVVYEHHPRPKQL 1318
>04_03_0973 + 21359391-21359885,21359984-21360169,21361054-21361344
Length = 323
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -2
Query: 357 STVLSSSPKYMTPSRTFSRNQTRAARLFETPRGKFVPLYTYGFGLEICVNGKPVRLSKLR 178
ST + +P P + R ++RA L + + KF+ L++ GKPV L+K
Sbjct: 261 STPVKGAPPAPVPLQLAVRFRSRAFVLGKLVKPKFLTNVQCSVRLDVAKLGKPVSLNKAC 320
Query: 177 TLV 169
+LV
Sbjct: 321 SLV 323
>08_02_0530 +
18244933-18245217,18245309-18245383,18246176-18246292,
18246503-18246631,18246726-18246785,18247271-18247441,
18247596-18247689,18247860-18247951,18248071-18248220,
18248407-18248465,18249735-18249864
Length = 453
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 201 PVRLSKLRTLVEHKDWSSAMIQCIRGTCINVWPSLVNSGICSGLG 67
P+ ++K R +E KD AM R T ++W S G+ +G+G
Sbjct: 380 PLDVAKTRRQIE-KDTQKAMRMTTRQTLADIWSSGGMKGLFTGVG 423
>03_02_0720 + 10662494-10663564
Length = 356
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 124 HVHQCVAKPS*LWNLFWSWISRRDVI 47
H H AKP W SW S RD I
Sbjct: 225 HAHDAPAKPEKAWQFSPSWASSRDRI 250
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,567,375
Number of Sequences: 37544
Number of extensions: 480533
Number of successful extensions: 1356
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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