Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2494
         (741 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    24   1.7  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    24   1.7  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    23   2.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   7.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   7.0  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   7.0  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   7.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.2  

>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = -2

Query: 611 YKHNNTL*ISKKIVSSDQFRIYFMKNKQFIKYLTGNRRFLGTRTHLNQF 465
           ++H ++    ++  S D+ R Y  K++Q+ K      +FL  RT   ++
Sbjct: 224 FQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRY 272


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = -2

Query: 611 YKHNNTL*ISKKIVSSDQFRIYFMKNKQFIKYLTGNRRFLGTRTHLNQF 465
           ++H ++    ++  S D+ R Y  K++Q+ K      +FL  RT   ++
Sbjct: 224 FQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSRKRY 272


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -2

Query: 611 YKHNNTL*ISKKIVSSDQFRIYFMKNKQFIKYLTGNRRFLGTRT 480
           ++H ++    ++  S D+ R Y  K++Q+ K      +FL  RT
Sbjct: 224 FQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKFLEERT 267


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 691 KNFVCKYLFWFKK 729
           KN V K+L+W+K+
Sbjct: 75  KNVVQKFLWWYKQ 87



 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 534 IFHKVYSKLVGANNLFRYSECIIMF 608
           IF+   +K +G +  F YSE ++ F
Sbjct: 578 IFYDKLNKAIGGSEPFTYSEKMLGF 602


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 691 KNFVCKYLFWFKK 729
           KN V K+L+W+K+
Sbjct: 75  KNVVQKFLWWYKQ 87



 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 534 IFHKVYSKLVGANNLFRYSECIIMF 608
           IF+   +K +G +  F YSE ++ F
Sbjct: 578 IFYDKLNKAIGGSEPFTYSEKMLGF 602


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 539 KNKQFIKYLTGN 504
           KN QF++Y  GN
Sbjct: 107 KNTQFLRYFVGN 118


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 539 KNKQFIKYLTGN 504
           KN QF++Y  GN
Sbjct: 107 KNTQFLRYFVGN 118


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 153 IPYHLISFDEMISDAHLMLS 94
           +P H+  + +MI D H  +S
Sbjct: 315 VPLHMQKYVQMIHDLHTRIS 334


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 153 IPYHLISFDEMISDAHLMLS 94
           +P H+  + +MI D H  +S
Sbjct: 315 VPLHMQKYVQMIHDLHTRIS 334


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,300
Number of Sequences: 438
Number of extensions: 4866
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)