Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2491
(691 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616... 101 7e-22
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 89 2e-18
06_02_0263 - 13566621-13569875 68 6e-12
04_03_0985 - 21438036-21438116,21438373-21438495,21438903-214389... 68 6e-12
01_06_0840 + 32343700-32344138,32345329-32345419,32345584-323458... 68 6e-12
05_04_0174 - 18728199-18731411 67 1e-11
07_03_0539 - 19237573-19239169,19239258-19239410,19239505-192395... 63 2e-10
03_02_0789 + 11207769-11208059,11208370-11208557,11208701-112097... 62 5e-10
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 54 1e-07
07_03_1304 - 25629822-25629839,25630091-25631148,25631784-256349... 44 9e-05
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 39 0.003
06_01_0645 + 4670966-4671021,4671128-4671177,4671270-4671350,467... 34 0.12
07_01_0014 - 103808-103873,103925-104248 33 0.21
04_01_0499 + 6529624-6530304,6530941-6531105 32 0.37
11_03_0216 + 11821726-11821860,11823217-11823286,11823704-118238... 32 0.49
11_04_0169 + 14397380-14397652,14398317-14398874,14399593-143998... 29 3.5
02_01_0106 - 780984-781279,781355-781578,781684-781920,782023-78... 29 4.6
03_02_0513 + 9035204-9035422,9035552-9036091,9036512-9036742,903... 28 6.1
09_03_0129 - 12590983-12591315,12591432-12591705,12591816-12593800 28 8.0
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 28 8.0
03_05_0490 + 24866418-24867008 28 8.0
>10_08_0343 - 16960764-16960895,16961166-16961171,16961272-16961640,
16962118-16962304,16962567-16962759,16962864-16963137,
16963215-16963374,16963985-16964199,16964784-16964876,
16965192-16965260,16965293-16965445,16965534-16965737,
16966416-16966691,16967336-16967431,16967585-16967788,
16967877-16968069,16968229-16968374,16968771-16969425,
16971462-16971774,16971989-16972139,16972602-16973815,
16973933-16974182,16974784-16975035
Length = 1934
Score = 101 bits (241), Expect = 7e-22
Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Frame = +2
Query: 2 LRLGAIGHFLSKAPEPPPLDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKM 181
L+LGA+ FL+KA +PP +V A LL+ +G LD + LT LG L LP++P +GKM
Sbjct: 1596 LQLGAVASFLAKALQPPDPLSVNNAIELLKTVGALDDVEELTSLGRHLCTLPLDPNIGKM 1655
Query: 182 MVLGFVLGVGD-ALTTMAANSTTFPEIFVLEGRRRLSMHQRALGGDRASDHVAMLNAFQM 358
+++G V D ALT AA + P + ++ + +R+ GD SDH+A++ AF+
Sbjct: 1656 LLIGSVFQCLDPALTIAAALAYRNPFVLPIDRKEEADAVKRSFAGDSCSDHIALVKAFEA 1715
Query: 359 WEREHNKGEEAELRWCEWKGVQQTTLRVTYEAKHQLINILTTAIGF 496
W+ G E W + + TL++ + ++Q ++L+ IGF
Sbjct: 1716 WKEARRSGRERSFCWENF--LSPMTLQMMDDMRNQFFDLLSD-IGF 1758
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 552 LDLVIALMCMGLYPNVCLHQGEEKGINDGRETGIDTQDLGKL 677
L++V A++C GLYPNV Q + + G+ T T+D+GK+
Sbjct: 1775 LEMVCAVLCAGLYPNVV--QCKRR----GKRTAFYTKDVGKV 1810
>03_05_1133 - 30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 89.4 bits (212), Expect = 2e-18
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 1/163 (0%)
Frame = +2
Query: 2 LRLGAIGHFLSKAPEPPPLDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKM 181
L++G+IG FLS A +PP AV A L+ +G LD + LT LG L+ LP++P+LGKM
Sbjct: 694 LQVGSIGEFLSAALQPPAPLAVQNAVEFLKMIGALDENENLTDLGRYLSMLPVDPKLGKM 753
Query: 182 MVLGFVLGVGDALTTMAANSTTFPEIFVLEGRRRLSMHQRA-LGGDRASDHVAMLNAFQM 358
+++G V D + T+ A + + + +R L+ ++ SDH+A++ A++
Sbjct: 754 LIMGAVFRCIDPILTVVAGLSARDPFLLPQDKRDLAGTAKSRFSAKDYSDHMALVRAYEG 813
Query: 359 WEREHNKGEEAELRWCEWKGVQQTTLRVTYEAKHQLINILTTA 487
W+ +G E W + Q TL+ + + Q IL A
Sbjct: 814 WKDAEREGSAYEYCWRNFLSAQ--TLQAIHSLRKQFSYILKDA 854
>06_02_0263 - 13566621-13569875
Length = 1084
Score = 68.1 bits (159), Expect = 6e-12
Identities = 43/145 (29%), Positives = 68/145 (46%)
Frame = +2
Query: 44 EPPPLDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALT 223
+PP ++I A L LG LD E LT +G +A+ P EP L KM++ LG D +
Sbjct: 813 DPPAPQSLITAMEQLYNLGALDEEGLLTRVGRRMAEFPQEPPLSKMLLASVDLGCSDEIL 872
Query: 224 TMAANSTTFPEIFVLEGRRRLSMHQRALGGDRASDHVAMLNAFQMWEREHNKGEEAELRW 403
T+ A T + ++ + +R DH+ +L +Q W+ + G W
Sbjct: 873 TIIAMIQTGNIFYRPREKQAQADRKRGNFFQPEGDHLTLLTVYQAWKAKQFSGP-----W 927
Query: 404 CEWKGVQQTTLRVTYEAKHQLINIL 478
C VQ T+LR + + QL+ I+
Sbjct: 928 CYENFVQLTSLRRAQDVRKQLLEIM 952
>04_03_0985 - 21438036-21438116,21438373-21438495,21438903-21438995,
21439176-21439388,21439589-21439687,21440248-21440317,
21442549-21442619,21442817-21442954,21443034-21443132,
21444061-21444144,21444268-21444324,21444594-21444683,
21444886-21445026,21445778-21445882,21445962-21446114,
21446215-21446316,21446404-21446562,21447039-21447222,
21447336-21447418,21447523-21447588,21447736-21447793,
21447903-21448003,21448269-21448355,21449063-21449185,
21449285-21449364,21449857-21450066,21450159-21450270,
21450709-21450927,21451356-21451726,21451866-21451965,
21452544-21452752,21453232-21453337,21453435-21453767
Length = 1439
Score = 68.1 bits (159), Expect = 6e-12
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Frame = +2
Query: 2 LRLGAIGHFLSKAPEPPPLDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKM 181
L LG I FL KA EPP +A+ A LL ++G + + L+PLG LAKLP++ +GKM
Sbjct: 1053 LHLGGIKSFLLKAIEPPKEEAISSAIDLLYQVGAFEGHEELSPLGYHLAKLPVDVLIGKM 1112
Query: 182 MVLGFVLG-VGDALTTMAANSTTFPEIFVLEGRR-----RLSMHQRALGG------DRAS 325
M+ G + G + L+ A S P I + ++ + S+ L G ++ S
Sbjct: 1113 MLYGAIFGCLSPILSVAAFLSYKSPFISPKDEKQNVEKAKASLMNENLDGSASTADNKQS 1172
Query: 326 DHVAMLNAFQMWER-EHNKGEEAELRWCEWKGVQQTTLRVTYEAKHQLINIL 478
DH+ M+ A+ W R G + ++C + T + + + + Q +L
Sbjct: 1173 DHLLMVIAYNKWSRILRENGARSAHQFCRSFYLNSTVMYMVRDMRLQYGTLL 1224
>01_06_0840 + 32343700-32344138,32345329-32345419,32345584-32345866,
32346023-32346097,32346470-32346514,32346889-32346979,
32347060-32347118,32347621-32347704,32348109-32348168,
32348585-32348637,32348724-32348757,32349334-32350335,
32350477-32351035,32351873-32352372,32352793-32353200
Length = 1260
Score = 68.1 bits (159), Expect = 6e-12
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 6/160 (3%)
Frame = +2
Query: 17 IGHFLSKAPEPPPLDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGF 196
I FL K +PP + V A +L++LG L ++ LT LG L LP+ P KM++ G
Sbjct: 782 IADFLRKTLDPPIPETVRNAITVLQDLGALTQDEQLTELGEKLGSLPVHPSTSKMLLFGI 841
Query: 197 VLGVGDALTTMAANSTTFPEIFVL----EGRRRLSMHQRALGG--DRASDHVAMLNAFQM 358
++ D T+A + + + F+L + R+R + + L SD +A++ A
Sbjct: 842 LMNCLDPALTLAC-AADYRDPFLLPMAPDERKRAAAAKVELASLYGGYSDQLAVVAAMDC 900
Query: 359 WEREHNKGEEAELRWCEWKGVQQTTLRVTYEAKHQLINIL 478
W R ++G+EA+ +C V T+ + + QL N L
Sbjct: 901 WRRAKDRGQEAQ--FCSKYFVSSNTMNMLSNMRKQLQNEL 938
>05_04_0174 - 18728199-18731411
Length = 1070
Score = 66.9 bits (156), Expect = 1e-11
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Frame = +2
Query: 44 EPPPLDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALT 223
+PPP ++++ A L LG L++ LT G +A+ P++P L K +V G + +
Sbjct: 790 DPPPAESLLRALEELFALGALNSRGELTKTGRRMAEFPLDPMLSKAIVASERYGCSEEVI 849
Query: 224 TMAANSTTFPEIFVLEGRRRLSMH--QRALGGDRASDHVAMLNAFQMWEREHNKGEEAEL 397
T+AA + +F +R+ +RA A DHVA+LN + W +
Sbjct: 850 TIAAMLSAGNAVFYRPRDKRVHADAARRAFHAGNAGDHVALLNVYNAWAESGYSPQ---- 905
Query: 398 RWCEWKGVQQTTLRVTYEAKHQL 466
WC VQ T+R + + QL
Sbjct: 906 -WCRESFVQHRTMRRARDVRDQL 927
>07_03_0539 - 19237573-19239169,19239258-19239410,19239505-19239566,
19239855-19240103,19240248-19240337,19240453-19240632,
19240713-19240942,19241558-19241735,19242327-19242432,
19242786-19242883,19243683-19243813,19243908-19244087,
19244179-19244443,19244557-19244627,19244707-19244922,
19245147-19245294
Length = 1317
Score = 63.3 bits (147), Expect = 2e-10
Identities = 41/147 (27%), Positives = 70/147 (47%)
Frame = +2
Query: 44 EPPPLDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALT 223
+PPP + ++ + L LG L+ ALT +G + + P++P L KM+++G L D +
Sbjct: 1006 DPPPQENILNSMYQLWVLGALNNVGALTVIGWKMVEFPLDPTLAKMLLMGEQLECLDEVL 1065
Query: 224 TMAANSTTFPEIFVLEGRRRLSMHQRALGGDRASDHVAMLNAFQMWEREHNKGEEAELRW 403
T+ + + F + R S R SDH+ +LN + W+ +G+ W
Sbjct: 1066 TIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYLQWKSNQYRGD-----W 1120
Query: 404 CEWKGVQQTTLRVTYEAKHQLINILTT 484
C + LR E + QL++IL T
Sbjct: 1121 CNDHFLHVKGLRKAREVRSQLLDILKT 1147
>03_02_0789 +
11207769-11208059,11208370-11208557,11208701-11209785,
11210163-11210288,11210367-11210605,11210688-11210806,
11210894-11211014
Length = 722
Score = 61.7 bits (143), Expect = 5e-10
Identities = 37/157 (23%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Frame = +2
Query: 44 EPPPLDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALT 223
+PP + ++ A +L LG LD + LTPLG +++ P++P++ KM+V+ + +
Sbjct: 455 DPPAPETLMRALEVLNYLGALDDDGNLTPLGETMSEFPLDPQMSKMLVISPKYNCSNEIL 514
Query: 224 TMAANSTTFPEIFVL-EGRRRLSMHQRALGGDRASDHVAMLNAFQMWEREHNKGEEAELR 400
+++A + P F+ ++ + +A G DH+ +LN + +++ + + +
Sbjct: 515 SISA-MLSVPNCFLRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE-----DPQ 568
Query: 401 WCEWKGVQQTTLRVTYEAKHQLINILTTAIGFNEECC 511
WC + L+ + QL+ I+T FN + C
Sbjct: 569 WCYENFINARALKSADNVRQQLVRIMTR---FNLKMC 602
>08_02_0259 - 14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 53.6 bits (123), Expect = 1e-07
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Frame = +2
Query: 44 EPPPLDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVGDALT 223
+PPP +A+++A L L L++ LT G +A+ P++P L KM+V D +
Sbjct: 799 DPPPSEALLKALEQLFALSALNSRGELTKTGRRMAEFPLDPMLSKMIVASEKYKCSDEVI 858
Query: 224 TMAANSTTFPEIFVLEGRRRLSMHQRALG--GDRASDHVAMLNAFQMWEREHNKGEEAEL 397
++A+ + IF +++ L DH+A+LN + W K +
Sbjct: 859 SIASMLSVGNSIFYRPKDKQVHADNARLNFHTGNVGDHIALLNVYNSW-----KETDYST 913
Query: 398 RWCEWKGVQQTTLRVTYEAKHQLINIL 478
+WC +Q + QL NI+
Sbjct: 914 QWCYENYIQSPNGKYQLFEGCQLQNIV 940
>07_03_1304 - 25629822-25629839,25630091-25631148,25631784-25634928,
25635454-25636293
Length = 1686
Score = 44.4 bits (100), Expect = 9e-05
Identities = 49/171 (28%), Positives = 72/171 (42%), Gaps = 7/171 (4%)
Frame = +2
Query: 44 EPPPLDAVIEAEALLRELGCLDAE-DA--LTPLGTILAKLPIEPRLGKMMVLGFVLGV-- 208
+ P +A+ A L +LG + + D LT G L KL IEPRLGK+M+ F G+
Sbjct: 652 DAPNPEAINMAVKNLEQLGAVKYKCDGFELTDTGRYLVKLGIEPRLGKIMLDCFGFGLRK 711
Query: 209 -GDALTTMAANSTT-FPEIFVLEGRRRLSMHQRALGGDRASDHVAMLNAFQMWEREHNKG 382
G L + ANS++ F + E + + + + D +L ++ WE EH
Sbjct: 712 EGVVLAAVMANSSSIFCRVGTDEEKYKAD-RLKVPFCHQDGDLFTLLAVYKEWEDEH--- 767
Query: 383 EEAELRWCEWKGVQQTTLRVTYEAKHQLINILTTAIGFNEECCVPQRWMPN 535
E WC + T+R E L N L + VP W N
Sbjct: 768 -ENRNTWCWQNSINAKTMRRCQETISDLENCLRHELNI----IVPSYWCWN 813
>02_05_0672 +
30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/49 (32%), Positives = 31/49 (63%)
Frame = +2
Query: 41 PEPPPLDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMV 187
P PP ++++EAE L+ L LD++ T +G +A+ P+ PR ++++
Sbjct: 785 PTPPDKESLVEAERCLKVLEALDSKGEPTLMGKAMAQYPMSPRHSRLLL 833
>06_01_0645 +
4670966-4671021,4671128-4671177,4671270-4671350,
4671862-4672078,4673220-4673607,4673830-4674033,
4675174-4675334,4675401-4675586,4675732-4675963,
4676530-4676732,4677074-4677208,4677367-4677550
Length = 698
Score = 33.9 bits (74), Expect = 0.12
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 13/169 (7%)
Frame = +2
Query: 44 EPPPLDAVIEAEALLRELGCLDAEDALT-PLGTILAKLPIEPRLGKMMVLGFVLGVGDAL 220
E P A++++ L LG L + L+ P+G +A+LP++P K +++ + +
Sbjct: 444 EKPSRTAILKSLEQLILLGALTDDYKLSDPVGRQMARLPLDPMYSKALIVASEFKCLEEM 503
Query: 221 TTMAANSTTFPEIFVLEGRRRLSMHQRALGGDRAS--DHVAMLNAF----QMWEREHNKG 382
+ S E R +L + A +S DH+ ++N + + E+ N
Sbjct: 504 LIVV--SMLSVESIFFSPREKLEEARAARKSFESSEGDHITLVNVYRAAKECLEKSKNAN 561
Query: 383 ------EEAELRWCEWKGVQQTTLRVTYEAKHQLINILTTAIGFNEECC 511
E+A RWC + +LR + H I +G N C
Sbjct: 562 AKEKTMEKALNRWCRENFINYRSLRHACDV-HSQIQGHVQQMGLNVSSC 609
>07_01_0014 - 103808-103873,103925-104248
Length = 129
Score = 33.1 bits (72), Expect = 0.21
Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Frame = +1
Query: 199 AWRGRRSDHDGG*LYNVPGNIRARRPAATVDAPESXXXXXXXXXXXHVECFPDVGERT-- 372
AWR RR D GG + G +R + A V+A + V G R+
Sbjct: 11 AWRQRRLDDSGGAMTVGIGTLRPQLHTAAVEARDPAGGNRPRTDPAAVAALSPCGIRSPS 70
Query: 373 ---QQRRRGRA-TVVRMEGRT 423
Q R RG A TVVR EGRT
Sbjct: 71 FPPQIRWRGGASTVVRPEGRT 91
>04_01_0499 + 6529624-6530304,6530941-6531105
Length = 281
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 50 PPLDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVG 211
PP DAV+ L L C DA+D + +G +P+ GK++++ V+G G
Sbjct: 219 PPADAVL----LKHVLHCWDADDCVKIVGQCKKAIPVRGDGGKVILINPVIGYG 268
>11_03_0216 +
11821726-11821860,11823217-11823286,11823704-11823861,
11824304-11824479,11824564-11824612,11825293-11825430
Length = 241
Score = 31.9 bits (69), Expect = 0.49
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +2
Query: 266 LEGRRRLSMHQRALGGDRASDHVAMLNAFQMWEREHNKGEEAELRWCEWKGVQQTTLRVT 445
+EG+R+ Q G DH+ +L F+ W+R G + RWC +Q ++ +
Sbjct: 1 MEGKRK---RQELPDGSGWGDHIQLLQIFESWDR---TGYDP--RWCSDHELQVRGMKFS 52
Query: 446 YEAKHQLINIL 478
+ ++QL I+
Sbjct: 53 KDVRNQLSQII 63
>11_04_0169 +
14397380-14397652,14398317-14398874,14399593-14399823,
14399924-14400064,14401051-14401248,14401319-14401591,
14401959-14401976
Length = 563
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 233 ANSTTFP--EIFVLEGRRRLSMHQRALGGDRASDHVAMLNAFQMWEREHNKGEEAELRWC 406
A+S T P ++ + GRR L+ + + D + L A Q E+N G+ +W
Sbjct: 245 ASSGTNPLGSLWKMTGRRLLTAKEEVEFSEGIQD-LLKLEAIQAELAEYNGGQPTFAQWA 303
Query: 407 EWKGVQQTTLR 439
GV + TLR
Sbjct: 304 TAAGVDERTLR 314
>02_01_0106 -
780984-781279,781355-781578,781684-781920,782023-782126
Length = 286
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 316 VSAQGSLVHRQSPPAFEHEYFRERCRV 236
V A G LV + P EH++ ERCRV
Sbjct: 257 VRADGFLVSSSTGPLVEHDFPPERCRV 283
>03_02_0513 +
9035204-9035422,9035552-9036091,9036512-9036742,
9036829-9036969,9037344-9037541,9037644-9037937
Length = 540
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +2
Query: 260 FVLEGRRRLSMHQRALGGDRASDHVAMLNAFQMWEREHNKGEEAELRWCEWKGVQQTTLR 439
+ + GRR L+ Q D + L A Q +N GE +W E G + TLR
Sbjct: 232 YKMTGRRLLTAKQEVEFSQGIQD-LLKLEAIQKELAHYNGGEPTFSQWAEAAGTDENTLR 290
>09_03_0129 - 12590983-12591315,12591432-12591705,12591816-12593800
Length = 863
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +2
Query: 257 IFVLEGRRRLSMHQRALGGDRASDHVAMLNAFQMWEREHNKGEEAELRWCEWKGVQQTTL 436
+F++ GR R ++ + D+ A F W +E + + CEWK + + +
Sbjct: 630 VFIVSGRDRTTLSEWFASCDKLGI-AAEHGYFIRWNKEGEWETSSSAQDCEWKNIAEPIM 688
Query: 437 RVTYE 451
V E
Sbjct: 689 EVYKE 693
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 264 CSKAGGDCRCTREPWAETGPPTTWP 338
CS G+C C PW PP WP
Sbjct: 225 CSGGHGNCGCGIRPW----PPQVWP 245
>03_05_0490 + 24866418-24867008
Length = 196
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +2
Query: 32 SKAPEPPPLDAVIEAEALLRELGCLDAEDALTPLGTILAKLPIEPRLGKMMVLGFVLGVG 211
S AP PPP A A+ +E DA P+ A + E G+ ++L G G
Sbjct: 8 SSAPPPPPQPAEPAADPPAKEEPQNTTADAAAPVSDAGAAVAAEE--GETVILDAAAGEG 65
Query: 212 DA 217
DA
Sbjct: 66 DA 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,913,466
Number of Sequences: 37544
Number of extensions: 410666
Number of successful extensions: 1423
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -