Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2488
         (722 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0629 + 30475493-30475674,30477091-30477125,30477566-304777...    29   4.9  
10_07_0151 + 13430925-13431240,13431858-13432015,13432996-134330...    28   8.6  

>02_05_0629 +
           30475493-30475674,30477091-30477125,30477566-30477724,
           30478558-30478568,30479669-30479730,30480166-30480265,
           30480495-30480770
          Length = 274

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +3

Query: 264 RSRSGPLVNYNTIELSIEFNKRRQSYVTGANRVLLKIGHIIQQNCDY 404
           R R G L++   IELS   N   Q  +   N+V  K   I+ + CDY
Sbjct: 180 RMRKGSLIHQENIELSRSLNVMSQQKLELYNKVRCK---ILLETCDY 223


>10_07_0151 +
           13430925-13431240,13431858-13432015,13432996-13433042,
           13433818-13433881,13434795-13435243,13435618-13435848,
           13436181-13436226
          Length = 436

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 535 GTFPKRTLFEFNFLFLCPFLV 473
           G   +RTL EF  +FLCP LV
Sbjct: 35  GPRERRTLLEFGSIFLCPRLV 55


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,887,465
Number of Sequences: 37544
Number of extensions: 280962
Number of successful extensions: 465
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)