Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2487
(557 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 156 2e-39
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 116 2e-27
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 113 1e-26
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 111 7e-26
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 101 7e-23
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 101 7e-23
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 97 1e-21
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 96 4e-21
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 76 4e-15
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 72 5e-14
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 64 1e-11
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 64 2e-11
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 62 4e-11
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 62 4e-11
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 60 2e-10
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 56 5e-09
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 53 2e-08
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 48 7e-07
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 41 1e-04
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 41 1e-04
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 33 0.038
SPBC1271.12 |kes1||oxysterol binding protein |Schizosaccharomyce... 29 0.35
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 28 0.81
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 27 1.4
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 27 1.9
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 27 1.9
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 26 3.3
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 4.3
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 25 5.7
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 25 5.7
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 25 7.5
SPAP8A3.03 |||ZIP zinc transporter 1|Schizosaccharomyces pombe|c... 25 7.5
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 25 10.0
SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|ch... 25 10.0
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 25 10.0
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 156 bits (379), Expect = 2e-39
Identities = 80/114 (70%), Positives = 91/114 (79%), Gaps = 2/114 (1%)
Frame = +3
Query: 219 NGAPQTKVC-QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDD-TT 392
N AP+ V KLVLLG+SAVGKSSLVLRFVK QF +Y+ESTIGAAFLTQ + D+ T+
Sbjct: 4 NTAPKNVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTS 63
Query: 393 VKFEIWDTAGQERYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQA 554
VK EIWDTAGQERY SLAPMYYR A AIVVYDIT + +AK+W+KELQRQA
Sbjct: 64 VKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQA 117
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 116 bits (279), Expect = 2e-27
Identities = 51/102 (50%), Positives = 71/102 (69%)
Frame = +3
Query: 249 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQE 428
FK VL+G+S VGKS+L++RF + +F+ +STIG F T+ I D+ +K +IWDTAGQE
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 429 RYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQA 554
RY ++ YYRGA A++VYDIT Q +F W+KEL+ A
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHA 112
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 113 bits (273), Expect = 1e-26
Identities = 50/102 (49%), Positives = 68/102 (66%)
Frame = +3
Query: 249 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQE 428
FKL+L+G+S VGKS L+LRF + E STIG F + + TVK +IWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 429 RYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQA 554
R+ ++ YYRGA I+VYD+T+QD+F K W++E+ R A
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYA 110
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 111 bits (267), Expect = 7e-26
Identities = 47/102 (46%), Positives = 73/102 (71%)
Frame = +3
Query: 246 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQ 425
+FKLV LGE +VGK+SL+ RF+ QF ++TIG FL++ + +D TV+ ++WDTAGQ
Sbjct: 11 KFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 70
Query: 426 ERYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQ 551
ER+ SL P Y R + AI+VYDITN ++F + W+++++ +
Sbjct: 71 ERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAE 112
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 101 bits (242), Expect = 7e-23
Identities = 45/102 (44%), Positives = 68/102 (66%)
Frame = +3
Query: 252 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQER 431
K+++LGES VGK+S++ ++V +F + ++TIGA FLT+ + DD V ++WDTAGQER
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 432 YHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQAS 557
+ SL +YRGA ++VYD+ N +F +W E QAS
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQAS 111
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 101 bits (242), Expect = 7e-23
Identities = 45/102 (44%), Positives = 67/102 (65%)
Frame = +3
Query: 252 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQER 431
K+V+LG+S VGK+ L+ +FV +F ++TIGA FLT+ + DD V ++WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 432 YHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQAS 557
+ SL +YRGA ++VY++ N +F +NW +E Q S
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTS 111
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 97.5 bits (232), Expect = 1e-21
Identities = 42/102 (41%), Positives = 65/102 (63%)
Frame = +3
Query: 252 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQER 431
KL+L+G+S VGKS L+LRF + F +TIG F + I D +K +IWDTAGQER
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 432 YHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQAS 557
+ ++ YYRGA +++YD+T++ +F + W +++ AS
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHAS 112
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 95.9 bits (228), Expect = 4e-21
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
Frame = +3
Query: 252 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRF----DDTTVKFEIWDTA 419
K+VL G S GKS L+ RFVK Q+ + T+G F ++ I +K +IWDTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 420 GQERYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQA 554
GQE++ S+A YYRGA A++VYD+TN+D+F +W+ +++ A
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMA 115
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 75.8 bits (178), Expect = 4e-15
Identities = 29/96 (30%), Positives = 57/96 (59%)
Frame = +3
Query: 252 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQER 431
K+ ++G+S++GK+SL++ +V+G F E T+G F+ + I +T + F IWD GQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 432 YHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKE 539
+ ++ PM A + + ++D++ + T K W ++
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQ 107
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 72.1 bits (169), Expect = 5e-14
Identities = 36/107 (33%), Positives = 59/107 (55%)
Frame = +3
Query: 228 PQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEI 407
PQ V FKLVL+G+ GK++ V R + G+F + +T+G + + F +
Sbjct: 4 PQN-VPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNV 62
Query: 408 WDTAGQERYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQR 548
WDTAGQE+ L YY Q I+++D+T++ T+ +W ++L R
Sbjct: 63 WDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVR 109
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 64.5 bits (150), Expect = 1e-11
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Frame = +3
Query: 231 QTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIW 410
Q++ + KLV++G+ A GK+SL+ F G F T+ +++ R D +V+ +W
Sbjct: 3 QSQPIRRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDC-RVDGKSVQLALW 61
Query: 411 DTAGQERYHSLAPMYYRGAQSAIVVYDITNQDTFGR-AKNWVKEL 542
DTAGQE Y L PM Y A +V + I + D+ + W++E+
Sbjct: 62 DTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEI 106
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 63.7 bits (148), Expect = 2e-11
Identities = 29/105 (27%), Positives = 60/105 (57%)
Frame = +3
Query: 234 TKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWD 413
T + ++KLV++G+ VGKS+L ++ ++ F + + TI ++ + D ++ D
Sbjct: 4 TYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKC-EIDGEGALLDVLD 62
Query: 414 TAGQERYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQR 548
TAGQE Y ++ Y R + ++VY+IT++ +F + +++ R
Sbjct: 63 TAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILR 107
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 62.5 bits (145), Expect = 4e-11
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = +3
Query: 252 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQER 431
KLV++G+ A GK+ L++ F KG F E T+ ++ + D V+ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHVELALWDTAGQED 66
Query: 432 YHSLAPMYYRGAQSAIVVYDITNQDTFGRA-KNWVKEL 542
Y L P+ Y + ++ + + + D+ + W+ E+
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEV 104
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 62.5 bits (145), Expect = 4e-11
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = +3
Query: 252 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQER 431
K+V+LG+ A GK+SL+ F KG F + E TI ++ I D +++ +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHD-IFVDGNSIELSLWDTAGQEE 73
Query: 432 YHSLAPMYYRGAQSAIVVYDITNQDTFGRA-KNWVKEL 542
Y L + Y ++ + + ++D+ W+ E+
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEV 111
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 60.5 bits (140), Expect = 2e-10
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +3
Query: 252 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQER 431
KLV++G+ A GK+ L++ F KG F E T+ ++ + D ++ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHIELALWDTAGQED 66
Query: 432 YHSLAPMYYRGAQSAIVVYDITNQDTFGRA-KNWVKEL 542
Y L P+ Y + ++ + + ++ + W+ E+
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEV 104
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 55.6 bits (128), Expect = 5e-09
Identities = 31/91 (34%), Positives = 50/91 (54%)
Frame = +3
Query: 252 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQER 431
++ +LG +VGKSSL +++V+ F E TI F ++ I++ EI DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQEFATEIIDTAGQDE 66
Query: 432 YHSLAPMYYRGAQSAIVVYDITNQDTFGRAK 524
Y L + G ++VY IT++ +F K
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVK 97
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 53.2 bits (122), Expect = 2e-08
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +3
Query: 252 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTV-KFEIWDTAGQE 428
KLV++G+ GK+ L++ F G F E T+ ++T ++ V + +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 429 RYHSLAPMYYRGAQSAIVVYDITNQDTFGR-AKNWVKELQ 545
Y L P+ Y + ++ + I + + W E+Q
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQ 115
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 48.4 bits (110), Expect = 7e-07
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +3
Query: 252 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQER 431
K V++G+ AVGK+ L++ + +F T+ + + D ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 432 YHSLAPMYYRGAQSAIVVYDITNQDTFGRAK-NWVKEL 542
Y L P+ Y +V + +T+ +F K W E+
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEV 101
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 41.1 bits (92), Expect = 1e-04
Identities = 22/93 (23%), Positives = 46/93 (49%)
Frame = +3
Query: 246 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQ 425
+ ++++LG A GK++++ + Q T+G F + + + + +KF +WD GQ
Sbjct: 21 EMRILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVG--FNVETVTYKN--IKFNVWDVGGQ 75
Query: 426 ERYHSLAPMYYRGAQSAIVVYDITNQDTFGRAK 524
++ L Y+ G + I V D + + A+
Sbjct: 76 DKIRPLWRHYFTGTKGLIFVVDSADSNRISEAR 108
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 40.7 bits (91), Expect = 1e-04
Identities = 25/101 (24%), Positives = 51/101 (50%)
Frame = +3
Query: 246 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQ 425
+ +++++G A GK++++ + G+ TIG F + + + + + F +WD GQ
Sbjct: 17 EMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIG--FNVETVEYRN--ISFTVWDVGGQ 71
Query: 426 ERYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQR 548
++ L Y++ Q I V D +++ A +ELQR
Sbjct: 72 DKIRPLWRHYFQNTQGIIFVVDSNDRERISEAH---EELQR 109
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 32.7 bits (71), Expect = 0.038
Identities = 22/99 (22%), Positives = 44/99 (44%)
Frame = +3
Query: 246 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQ 425
+ +++LLG GK++++ + +E T G T + ++F IWD GQ
Sbjct: 16 EVRVLLLGLDNAGKTTILKCLLNEDVNEVSP-TFGFQIRTLEVE----GLRFTIWDIGGQ 70
Query: 426 ERYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKEL 542
+ + Y+ ++ I V D + +N ++EL
Sbjct: 71 KTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQEL 109
>SPBC1271.12 |kes1||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 388
Score = 29.5 bits (63), Expect = 0.35
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 161 SYNNREGYGDKQDRSRTEAQWRSTDKSLPVQAG 259
S ++R+G GDK+ RS T++ W S KS+ +G
Sbjct: 7 SDDSRDGEGDKRLRSTTKSTWLSFLKSIATFSG 39
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 28.3 bits (60), Expect = 0.81
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Frame = +3
Query: 252 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ--AIRFDDTTVKFEIWDTAGQ 425
K++L+G S GKSS+ V + +GA + +RF V +WD GQ
Sbjct: 4 KVLLMGRSGSGKSSM-RSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV-LNLWDCGGQ 61
Query: 426 ERY-----HSLAPMYYRGAQSAIVVYDITNQD 506
E + + +R Q I V+D+ +++
Sbjct: 62 EAFMENYLSAQRDHIFRNVQVLIYVFDVESRE 93
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 218 GPLCGSGPVCRHIPPCYCSSVLNFFLGDRSSRSRRDTEIIINYTLKQ 78
G + SG HI P Y S VLN +G R T +I+ L++
Sbjct: 150 GVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRK 196
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1389
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 287 LAYRRLAQQHQLELADFCLWSAIGPLCGSGPVCRHIPPCYCSSVLNFFLGDRSS 126
+A + Q +LE ++ W+ +G L R CY S+L L +RSS
Sbjct: 914 VAINCIKQAIKLEAKNYVFWNMLGVLFSQTKAVRSAQHCYIQSLL---LNERSS 964
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 316 PLTNRSTSEDLPTADSPNNTSLN 248
P N TS+DL DSPN + +N
Sbjct: 376 PSENSDTSDDLTKVDSPNKSLVN 398
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 26.2 bits (55), Expect = 3.3
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 255 LVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTT----VKFEIWDTAG 422
+V+ GE+ GKS+ V++F+ + E + TQ R + V FE T G
Sbjct: 596 VVISGETGSGKSTQVVQFILDHYLSSGEKDLQTVVCTQPRRISAISLAERVAFERDTTVG 655
Query: 423 QERYHSL 443
+E +S+
Sbjct: 656 KEVGYSV 662
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 25.8 bits (54), Expect = 4.3
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 361 RNAAPMVLSWYSWNCPLT-NRSTSEDLPTADSPNNTSL 251
++ A V+ +W CPLT N +T + L ++P++ SL
Sbjct: 109 KSGAVRVIPPDNWKCPLTINTTTFKFLTRKNNPSSMSL 146
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 25.4 bits (53), Expect = 5.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 328 SWNCPLTNRSTSEDLPTADS 269
S N P N T EDLPT D+
Sbjct: 263 SENVPKPNAETQEDLPTIDA 282
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.4 bits (53), Expect = 5.7
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -2
Query: 412 SQISNLTVVSSNRMAWVRNAAPMVLSWYSWNCPLTNRSTSEDLPTADSPNNTSLN 248
S +S+ T ++ +R A +N L++ S P ++ STS S N TS+N
Sbjct: 225 SSVSS-TYLTQDREASSKNCLSKALAFSSIEPPASSASTSPRNTPTPSNNGTSIN 278
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 25.0 bits (52), Expect = 7.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 283 PTADSPNNTSLNWQTFVCGAPLGLCAAPVLFVAIS 179
P+ +P +NW V GAP+ A +++ AIS
Sbjct: 486 PSVKNPTPAEMNWTCLVFGAPM---LAVLIWYAIS 517
>SPAP8A3.03 |||ZIP zinc transporter 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 453
Score = 25.0 bits (52), Expect = 7.5
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -2
Query: 415 VSQISNLTVVSSNRMAWVRNAAPMVLSWYSWNCPLTNRSTSEDLPTADSPNNT 257
+S L +S +A R VLS+ N P+ S+SE T + NN+
Sbjct: 65 LSSSKTLAELSKGELAKAREDLKSVLSFLKNNLPVDTESSSEAF-TIEKDNNS 116
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 24.6 bits (51), Expect = 10.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 557 RSLPLEFLHPILGATECV 504
R +PL L P++GATE V
Sbjct: 1602 RKVPLIVLQPMIGATEAV 1619
>SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 24.6 bits (51), Expect = 10.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 113 HGDFVKICRPRKSSERSYNNREG 181
HGD ++ + +K+ R Y NR G
Sbjct: 213 HGDVGQVYKQKKTKYRQYMNRPG 235
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 24.6 bits (51), Expect = 10.0
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 122 FVKICRPRKSSERSYNNREGYGD 190
+++ R ++ E+ Y NR GY D
Sbjct: 598 YIRRLREKRELEKQYQNRRGYYD 620
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,447,351
Number of Sequences: 5004
Number of extensions: 50009
Number of successful extensions: 192
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 233995432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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