Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2473
(381 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1146 - 30735010-30735216,30735336-30735650,30740169-307401... 38 0.002
02_04_0653 - 24747959-24748276,24748847-24748959,24749815-247500... 36 0.008
09_04_0706 + 19627024-19627380,19629945-19629976,19630657-196307... 35 0.019
08_02_0611 + 19317969-19318778 32 0.13
06_03_0498 - 21432958-21434245,21434579-21435310,21435502-214357... 31 0.23
05_02_0004 - 5528713-5528718,5529039-5529390,5529802-5530339,553... 31 0.41
03_04_0161 + 17838466-17838551,17842379-17842445,17842537-178426... 31 0.41
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 31 0.41
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 30 0.71
07_03_1232 + 25052415-25052918 29 1.2
04_04_0188 - 23433753-23436572 28 2.9
07_03_1772 + 29411874-29413218,29413355-29413421,29413749-294138... 27 3.8
02_05_0239 + 27101440-27101904 27 3.8
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026... 27 3.8
05_01_0372 - 2913518-2916562,2916674-2917528 27 5.0
08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671 27 6.6
07_01_0773 + 5963165-5963306,5963440-5963489,5963580-5963645,596... 27 6.6
03_01_0480 - 3676529-3676687,3676767-3676931,3677044-3677220,367... 27 6.6
12_01_0028 + 242016-242467,242547-242918,243027-243182,245007-24... 26 8.7
10_06_0057 + 10143578-10143804,10144072-10144147,10144360-10144899 26 8.7
07_03_1233 + 25057139-25057262,25058340-25058911 26 8.7
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960... 26 8.7
>03_05_1146 -
30735010-30735216,30735336-30735650,30740169-30740191,
30740591-30740666,30740764-30740889,30740968-30741033,
30741296-30741539,30741639-30741691
Length = 369
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 200 AAEGARHQA--KCNICKDYSIVGFRYRCLKCFNFDMCQKCFFNGRKGKNHKLTH 355
A EG +A CN C R +C KC +FD+C +CF G + H+ H
Sbjct: 41 AGEGGGKKALYHCNYCNKDISGKIRIKCSKCPDFDLCVECFSVGAEVTPHRSNH 94
>02_04_0653 -
24747959-24748276,24748847-24748959,24749815-24750015,
24750097-24750267,24750354-24750425,24751515-24751543,
24752161-24752303
Length = 348
Score = 36.3 bits (80), Expect = 0.008
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
Frame = +2
Query: 230 CNICKDYSIVGFRYRCLKC---FNFDMCQKCF-----FNGRKGKNHKLTHSMQ 364
C+ C Y I G RY+C C FD+C++C+ GR ++H H M+
Sbjct: 239 CDSCGMYPIRGKRYKCKDCTELIGFDLCEECYNTKSKLPGRFNQHHTPDHRME 291
>09_04_0706 +
19627024-19627380,19629945-19629976,19630657-19630751,
19632116-19632281,19632881-19632938,19633014-19633061,
19633274-19633464,19633580-19633702,19635174-19635289,
19635841-19635924,19636009-19636259,19636438-19636647
Length = 576
Score = 35.1 bits (77), Expect = 0.019
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Frame = +2
Query: 230 CNICKDYSIVGFRYRCLKCF--NFDMCQKCFF-----NGRKGKNHKLTHSMQ 364
C+ C + I G RY C +C D+C+KCF GR + H H M+
Sbjct: 503 CDGCGVFPIQGRRYSCKECEAPGLDLCEKCFMTGSTAEGRFDQKHTADHDME 554
>08_02_0611 + 19317969-19318778
Length = 269
Score = 32.3 bits (70), Expect = 0.13
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 173 WLPVLHRLAAAEGARHQAKCNICKDYSIVGFRYRCLKCFNFDMCQKC 313
W H L A A +C+ C++ G RYRC C NFD+ C
Sbjct: 14 WAHPEHELTLAATAGAPFRCDGCQEPGGDGPRYRCAPC-NFDLHTDC 59
>06_03_0498 -
21432958-21434245,21434579-21435310,21435502-21435788,
21435955-21436026,21436130-21436264,21436887-21436925
Length = 850
Score = 31.5 bits (68), Expect = 0.23
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 98 RDGQVQYIEAFQFLQWLQREPQSMV-----WLPVLHRLAAAEGARHQAKCNICKDYSIVG 262
R + + FQ + W+ R+ ++V W P++ A +EG + K +IC +S+
Sbjct: 462 RRNNLYNVRYFQLI-WVTRKRWALVYFKSNWCPLIQTTARSEGTNSRYKADICSSHSVSA 520
Query: 263 F 265
F
Sbjct: 521 F 521
>05_02_0004 -
5528713-5528718,5529039-5529390,5529802-5530339,
5530354-5531731,5531895-5532015,5534226-5534545
Length = 904
Score = 30.7 bits (66), Expect = 0.41
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +2
Query: 98 RDGQVQYIEAFQFLQWLQREPQSMV-----WLPVLHRLAAAEGARHQAKCNICKDYSIVG 262
R + + FQ L W+ R+ + V W P++ A +EG + K +IC +S+
Sbjct: 697 RRNNLYNVRYFQ-LMWVTRKRWAPVYFKSNWCPLIQTTARSEGTNSRHKADICSSHSVSA 755
Query: 263 F 265
F
Sbjct: 756 F 756
>03_04_0161 +
17838466-17838551,17842379-17842445,17842537-17842662,
17842756-17842886,17843121-17843220,17843334-17843466,
17843500-17843544,17843545-17843608,17843692-17844469,
17844897-17845229,17845427-17845634,17845733-17845809,
17846168-17846240,17846343-17846413,17846597-17846716,
17846815-17846879,17846974-17847124
Length = 875
Score = 30.7 bits (66), Expect = 0.41
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 230 CNICKDYSIVGFRYRCLKCFNFDMCQKCFFNGRKGK 337
C+ CK SIV F C C ++D+C C + RKG+
Sbjct: 251 CDRCKT-SIVDFHRSCKAC-SYDLCLACCWELRKGE 284
>01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 30.7 bits (66), Expect = 0.41
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 218 HQAKCNICKDYSIVGFRYRCLKCFNFDMCQKCF 316
H+ C C + G + C C NF +C++C+
Sbjct: 946 HKQFCKHCHHPIVSGSSWVCTSCKNFFLCERCY 978
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 29.9 bits (64), Expect = 0.71
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 230 CNICKDYSIVGFRYRCLKCFNFDMCQKCF 316
C+ C I+ R+ C C +FD+C+ C+
Sbjct: 2609 CDGCSTVPILRRRWHCNICPDFDLCETCY 2637
>07_03_1232 + 25052415-25052918
Length = 167
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 188 HRLAAAEGARHQAKCNICKDYSIVGFRYRCLKCFNFDMCQKC 313
H EG H C +C+ I G YRC +C FD + C
Sbjct: 18 HHYGGEEG--HACVCALCERI-IAGAGYRCGECGGFDAHEAC 56
>04_04_0188 - 23433753-23436572
Length = 939
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 98 RDGQVQYIEAFQFLQWLQREPQSMVWLPVL 187
R GQ + EA++F++ + EP+S+VW +L
Sbjct: 715 RSGQTE--EAYKFIKSMPLEPKSVVWCALL 742
>07_03_1772 +
29411874-29413218,29413355-29413421,29413749-29413896,
29415293-29415416,29416340-29416590,29416923-29418449,
29418786-29418896,29419576-29419734,29419827-29421734
Length = 1879
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 2 NFGTRVKGGNSWTGKTGKRKG*NERRSQSSETRDGQVQYIEAFQFLQWLQR 154
NF G K R G R + + G+V+ + AF F +WL+R
Sbjct: 348 NFEINADPGKEDEAKANGR-GMGRIRPMAGKKMSGEVRSVPAFDFAEWLKR 397
>02_05_0239 + 27101440-27101904
Length = 154
Score = 27.5 bits (58), Expect = 3.8
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 177 CPCCTAWPPPRGPATKPSAT 236
CP C AW + P T P T
Sbjct: 129 CPVCNAWVTTQSPGTSPPRT 148
>02_04_0448 -
23001579-23001683,23001783-23002382,23002479-23002628,
23002788-23003015,23003188-23003302,23003392-23004659,
23006621-23006692
Length = 845
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 227 KCNICKDYSIVGFRYRCLKCFNFDMCQKCF 316
+C+ C IVG RY+ ++D+C CF
Sbjct: 429 QCDGCGVQPIVGPRYKSKTKEDYDLCDACF 458
>05_01_0372 - 2913518-2916562,2916674-2917528
Length = 1299
Score = 27.1 bits (57), Expect = 5.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 71 ERRSQSSETRDGQVQYIEAFQFLQWLQR---EPQSMVWLPVLHRLAAAEGARHQAKCN 235
E ++ + +V+ I +FL+ + R P+ V VL+RL+ AEG RH + N
Sbjct: 579 EEMTEEEKKLHDKVELIRV-KFLRLVYRLGATPEETVAAQVLYRLSLAEGIRHGRQTN 635
>08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671
Length = 502
Score = 26.6 bits (56), Expect = 6.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 227 KCNICKDYSIVGFRYRCLKCFNFDMCQKC 313
KC+ CK+ G RY CL C + +M + C
Sbjct: 293 KCDACKEPGD-GPRYHCLTCEDLNMHKFC 320
>07_01_0773 +
5963165-5963306,5963440-5963489,5963580-5963645,
5964162-5964188,5965320-5965375,5966613-5966681,
5966901-5966995,5967141-5967251,5970545-5970879,
5971218-5971253,5971254-5971421
Length = 384
Score = 26.6 bits (56), Expect = 6.6
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -1
Query: 153 RCSHCRNWNASMYWTWPSRVSLDWLLLSFH 64
RCS C ++ ++ W PS D+ FH
Sbjct: 18 RCSACESYPSTTTWRRPSPAGFDFSYSHFH 47
>03_01_0480 -
3676529-3676687,3676767-3676931,3677044-3677220,
3678170-3678273,3678700-3678843,3679831-3679898,
3680059-3680162,3680759-3680767,3681572-3681657,
3681918-3683373
Length = 823
Score = 26.6 bits (56), Expect = 6.6
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 122 EAFQFLQWLQREPQSMVWLPVL 187
EAF+F+ ++ EP S++W +L
Sbjct: 402 EAFEFIDTMKCEPNSVIWRTLL 423
>12_01_0028 +
242016-242467,242547-242918,243027-243182,245007-245089,
245159-245222,245704-246001,246616-246726,247059-247100
Length = 525
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 189 TAWPPPRGPATKPSATSARTI 251
T PPP P+T P A+S+R++
Sbjct: 14 TTSPPPPPPSTPPPASSSRSL 34
>10_06_0057 + 10143578-10143804,10144072-10144147,10144360-10144899
Length = 280
Score = 26.2 bits (55), Expect = 8.7
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = +3
Query: 168 WCGCPCCTAWPPPRGPATKPSATSA 242
W CP CT PP + P A
Sbjct: 7 WAACPTCTGAPPDAADISDPQQRHA 31
>07_03_1233 + 25057139-25057262,25058340-25058911
Length = 231
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 230 CNICKDYSIVGFRYRCLKCFNFDMCQKC 313
C IC + G YRC C +FD+ + C
Sbjct: 80 CRICGTRVVAGAGYRCDHC-DFDIHEAC 106
>03_05_0951 +
29093962-29094373,29095291-29095388,29095689-29096087,
29096999-29097724,29097802-29097968,29098046-29098311,
29098396-29098581,29099072-29099346,29099435-29099683
Length = 925
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 230 CNICKDYSIVGFRYRCLKCFNFDMCQKCFFNGR 328
CN C RY C +FD+C C+ G+
Sbjct: 286 CNSCS-VDCSKKRYHCRTQADFDLCSDCYNEGK 317
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,279,895
Number of Sequences: 37544
Number of extensions: 155753
Number of successful extensions: 674
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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