Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2470
         (733 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D26018-1|BAA05039.1|  491|Homo sapiens KIAA0039 protein.               54   4e-07
BC092454-1|AAH92454.1|  267|Homo sapiens POLD3 protein protein.        54   4e-07
BC032636-1|AAH32636.1|  384|Homo sapiens POLD3 protein protein.        54   4e-07

>D26018-1|BAA05039.1|  491|Homo sapiens KIAA0039 protein.
          Length = 491

 Score = 54.4 bits (125), Expect = 4e-07
 Identities = 25/64 (39%), Positives = 39/64 (60%)
 Frame = +1

Query: 25  LNSIKNIILDERRLVTYTSISKELCIHVNKAKIFLREFVDELRKNKPNVGLSVSYIISGS 204
           L +I   + D+ ++VTY  +S  L +HVN+AK  L ++V+  RK      L V+Y++SGS
Sbjct: 32  LENIDEFVTDQNKIVTYKWLSYTLGVHVNQAKQMLYDYVERKRKENSGAQLHVTYLVSGS 91

Query: 205 LKNN 216
           L  N
Sbjct: 92  LIQN 95


>BC092454-1|AAH92454.1|  267|Homo sapiens POLD3 protein protein.
          Length = 267

 Score = 54.4 bits (125), Expect = 4e-07
 Identities = 25/64 (39%), Positives = 39/64 (60%)
 Frame = +1

Query: 25  LNSIKNIILDERRLVTYTSISKELCIHVNKAKIFLREFVDELRKNKPNVGLSVSYIISGS 204
           L +I   + D+ ++VTY  +S  L +HVN+AK  L ++V+  RK      L V+Y++SGS
Sbjct: 7   LENIDEFVTDQNKIVTYKWLSYTLGVHVNQAKQMLYDYVERKRKENSGAQLHVTYLVSGS 66

Query: 205 LKNN 216
           L  N
Sbjct: 67  LIQN 70


>BC032636-1|AAH32636.1|  384|Homo sapiens POLD3 protein protein.
          Length = 384

 Score = 54.4 bits (125), Expect = 4e-07
 Identities = 25/64 (39%), Positives = 39/64 (60%)
 Frame = +1

Query: 25  LNSIKNIILDERRLVTYTSISKELCIHVNKAKIFLREFVDELRKNKPNVGLSVSYIISGS 204
           L +I   + D+ ++VTY  +S  L +HVN+AK  L ++V+  RK      L V+Y++SGS
Sbjct: 7   LENIDEFVTDQNKIVTYKWLSYTLGVHVNQAKQMLYDYVERKRKENSGAQLHVTYLVSGS 66

Query: 205 LKNN 216
           L  N
Sbjct: 67  LIQN 70


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,139,585
Number of Sequences: 237096
Number of extensions: 1499623
Number of successful extensions: 6269
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6269
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)