Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2470
(733 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 25 0.73
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 24 1.3
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 24 1.3
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 24 1.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 24 1.3
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 2.2
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.2
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 2.2
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 23 2.2
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 3.9
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 3.9
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 3.9
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 3.9
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 3.9
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 3.9
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 22 5.2
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 5.2
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 5.2
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 5.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 5.2
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 6.8
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 6.8
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 9.0
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.0
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 9.0
>AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family
protein protein.
Length = 166
Score = 25.0 bits (52), Expect = 0.73
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +1
Query: 559 DHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKSNGNIMGIFIKN 696
DHD + + P+ SV N LDK + G FI N
Sbjct: 77 DHDDSDEEYAANSQPPRITSVPNTSRLDKSEISLATKQACG-FIDN 121
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 556 KDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKS 663
+ +++ +S K+E KY + +S D+K KS
Sbjct: 41 RSREREQNSYKNEREYRKYRETSKERSRDRKEREKS 76
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 556 KDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKS 663
+ +++ +S K+E KY + +S D+K KS
Sbjct: 41 RSREREQNSYKNEREYRKYRETSKERSRDRKEREKS 76
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 556 KDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKS 663
+ +++ +S K+E KY + +S D+K KS
Sbjct: 41 RSREREQNSYKNEREYRKYRETSKERSRDRKEREKS 76
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +1
Query: 556 KDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKS 663
+ +++ S K+E KY + +S D++ G+S
Sbjct: 274 RSREREQKSYKNENSYRKYRETSKERSRDRRERGRS 309
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.4 bits (48), Expect = 2.2
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 597 NFRFY-RICFLIMIFNSFHFILCIVIFFFN 511
+FRFY +C L+++ + IL + I FFN
Sbjct: 86 SFRFYWDLCMLLLLVANL-IILPVAISFFN 114
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.4 bits (48), Expect = 2.2
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 597 NFRFY-RICFLIMIFNSFHFILCIVIFFFN 511
+FRFY +C L+++ + IL + I FFN
Sbjct: 86 SFRFYWDLCMLLLLVANL-IILPVAISFFN 114
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.4 bits (48), Expect = 2.2
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 597 NFRFY-RICFLIMIFNSFHFILCIVIFFFN 511
+FRFY +C L+++ + IL + I FFN
Sbjct: 86 SFRFYWDLCMLLLLVANL-IILPVAISFFN 114
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 23.4 bits (48), Expect = 2.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 601 SPKYNSVTNNKSLDKKSNGKSNGNIMGIFIKNTKC*NGY 717
+P+ S + +S D+ NGNI+ I + C NG+
Sbjct: 340 TPRIMSSFDFQSKDQGPPNDGNGNILSPSIHDNICSNGW 378
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 520 ENHNTQNEVKTIKDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKS 663
E ++ ++ +KK S K+E KY + +S D+K +S
Sbjct: 31 EERTSRKRYSRSREREKK--SYKNENSYRKYRETSKERSRDRKERERS 76
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 520 ENHNTQNEVKTIKDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKS 663
E ++ ++ +KK S K+E KY + +S D+K +S
Sbjct: 31 EERTSRKRYSRSREREKK--SYKNENSYRKYRETSKERSRDRKERERS 76
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 520 ENHNTQNEVKTIKDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKS 663
E ++ ++ +KK S K+E KY + +S D+K +S
Sbjct: 31 EERTSRKRYSRSREREKK--SYKNENSYRKYRETSKERSRDRKERERS 76
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 520 ENHNTQNEVKTIKDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKS 663
E ++ ++ +KK S K+E KY + +S D+K +S
Sbjct: 31 EERTSRKRYSRSREREKK--SYKNENSYRKYRETSKERSRDRKERERS 76
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 520 ENHNTQNEVKTIKDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKS 663
E ++ ++ +KK S K+E KY + +S D+K +S
Sbjct: 264 EERTSRKRYSRSREREKK--SYKNENSYRKYRETSKERSRDRKERERS 309
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.6 bits (46), Expect = 3.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 675 YIPIRLSITFFIKRFIVSNRIVL 607
YIP+ + I + K F + RIVL
Sbjct: 212 YIPLFVMIQVYYKIFCAARRIVL 234
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 613 NSVTNNKSLDKKSNGKSNGN 672
N NN++ D ++ K NGN
Sbjct: 439 NQNANNQNADNQNANKQNGN 458
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +1
Query: 556 KDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKS 663
+ +++ S K+E KY + +S D+K +S
Sbjct: 41 RSREREQKSYKNENSYRKYRETSKERSRDRKERERS 76
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/51 (21%), Positives = 22/51 (43%)
Frame = +1
Query: 520 ENHNTQNEVKTIKDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKSNGN 672
+N N+ + + + + + PK S +NK++ +N K N N
Sbjct: 51 KNENSYRKYRETSKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYN 101
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +1
Query: 556 KDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKS 663
+ +++ S K+E KY + +S D+K +S
Sbjct: 274 RSREREQKSYKNENSYRKYRETSKERSRDRKERERS 309
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/51 (21%), Positives = 22/51 (43%)
Frame = +1
Query: 520 ENHNTQNEVKTIKDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKSNGN 672
+N N+ + + + + + PK S +NK++ +N K N N
Sbjct: 284 KNENSYRKYRETSKERSRDRTERERSREPKIISSLSNKTIHNNNNYKYNYN 334
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +1
Query: 556 KDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKS 663
+ +++ +S K+E KY + +S DK+ +S
Sbjct: 41 RSREREQNSYKNEKEYRKYRERSKERSRDKRERERS 76
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +1
Query: 556 KDHDKKTDSVKSEIPSPKYNSVTNNKSLDKKSNGKS 663
+ +++ +S K+E KY + +S DK+ +S
Sbjct: 41 RSREREQNSYKNEKEYRKYRERSKERSRDKRERERS 76
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.4 bits (43), Expect = 9.0
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = -1
Query: 598 EFQILQNLFSYHDL**FSLHSVYCDFLL*YCFSNLSLWSFSDFSQVLPGS*ILKCLFLHK 419
EF +LQ F+ + L VY +L S +S W + + G I L L
Sbjct: 230 EFSVLQVSFNLQRHTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGITTVLTLST 289
Query: 418 ISLN 407
ISL+
Sbjct: 290 ISLD 293
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 380 HNK*SSKVFIAINADLSILVQ 318
H K SK +A+NA+ I ++
Sbjct: 73 HKKKKSKTILAVNAEADITLK 93
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 380 HNK*SSKVFIAINADLSILVQ 318
H K SK +A+NA+ I ++
Sbjct: 73 HKKKKSKTILAVNAEADITLK 93
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,603
Number of Sequences: 438
Number of extensions: 3925
Number of successful extensions: 28
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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