Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2469
(675 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.81
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 28 1.1
SPAC4H3.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.5
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 27 3.3
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 27 3.3
SPAC1952.09c |||acetyl-CoA hydrolase|Schizosaccharomyces pombe|c... 26 4.3
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 26 5.7
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 25 7.6
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 7.6
SPBC646.12c |gap1|src1, sar1|GTPase activating protein Gap1|Schi... 25 7.6
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 25 7.6
SPBC119.09c |||ORMDL family protein|Schizosaccharomyces pombe|ch... 25 10.0
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 25 10.0
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 25 10.0
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 25 10.0
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 25 10.0
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 25 10.0
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos... 25 10.0
SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr 3|... 25 10.0
SPAC823.04 |||rRNA processing protein, DUF947|Schizosaccharomyce... 25 10.0
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 0.81
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 394 TELPPPNHRASIAGMPTRNSFSPGSPDEKKSFDEFLNRVDSSLAD--IKRHVEKTK--EN 561
+ + PP+ + G N+ SP+E E LN +D SL D +K + + + EN
Sbjct: 154 SNIQPPSAAPPVPGKENYNAVGSKSPNEP----ELLNSLDPSLIDSLMKMGISQDQIAEN 209
Query: 562 SEFVK 576
++FVK
Sbjct: 210 ADFVK 214
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 478 KKSFDEFLNRVDSSLADIKRHVEKTKENSEFVK-DIDE 588
KK DE++ + L I R++ TKENS+++K + DE
Sbjct: 388 KKERDEWIR---NQLLQINRNINSTKENSDYLKTEYDE 422
>SPAC4H3.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 391
Score = 27.1 bits (57), Expect = 2.5
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 400 LPPPNHRASIAGMPTRNSFSPGSPDEKKSFDEFLNRVDS 516
LP P ++A A P SPG P E D L R+ S
Sbjct: 168 LPSPEYKAPPAKKPEDYEASPGEPVEPLITDASLQRLKS 206
>SPCC63.04 |mok14||alpha-1,3-glucan synthase
Mok14|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1369
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 457 SPGSPDEKKSFDEFLNRVDSSLADIKRHVEKT 552
+P + K S D FLN+V S D + H KT
Sbjct: 850 TPENSKGKLSIDHFLNKVQSRWHDEEHHYYKT 881
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 26.6 bits (56), Expect = 3.3
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Frame = +1
Query: 355 TKDSPFYENGERVTELPPPNHRASIAGMPTRNSFSPGSPDEKKSFD-EFLNRVDSSLADI 531
T + P Y R TE PPP +S + P R P P S D + L+ + +D
Sbjct: 403 TSNVPAYSTPARPTESPPPPPISSSSTTP-RPDDKPSLPPRGLSEDNDSLSLQKTGSSDT 461
Query: 532 KRHVEKTKENSEFVKDIDEGYVRHRPD-GATQTVPRLWGASSSYNEVI 672
+R T + + D D + R R D T TV + S N+++
Sbjct: 462 RRSSFSTLK----IPDSDICFTRRRSDSNRTWTVIDPHHSQSFDNDIL 505
>SPAC1952.09c |||acetyl-CoA hydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 521
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 328 LREYLLIPVTKDSPFYENGERVTELPPPNHRASI 429
L E ++I V P +E + E+P P HR I
Sbjct: 170 LAEKIIIEVNTAIPSFEGLHDIVEIPNPPHRTPI 203
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 25.8 bits (54), Expect = 5.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 145 RESARPLKKYGSTCNHMKRNE 207
R SAR +K YGST N KR +
Sbjct: 240 RRSARYVKLYGSTTNTSKRRK 260
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 427 IAGMPTRNSFSPGSPDEKKSF 489
++G TRNS SPG KKS+
Sbjct: 859 LSGRTTRNSASPGIVSGKKSY 879
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.4 bits (53), Expect = 7.6
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = -3
Query: 655 TMKRPIDAGLFESRRRACASRNPHLYPSRTHCFLLFFLHVALCQPMMSLLCSGIRQNSSS 476
T KRP+DAGL R+ A R ++ H FL + Q M LC +N++
Sbjct: 378 TRKRPMDAGL--GRQGAIRQRKESVHEVYGHKFLQHQFY----QIMRCALCGEFLKNAA- 430
Query: 475 HRGFQAKNC 449
G Q +C
Sbjct: 431 --GMQCIDC 437
>SPBC646.12c |gap1|src1, sar1|GTPase activating protein
Gap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 766
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +1
Query: 502 NRVDSSLADIKRHVEKTKENSEFV 573
NR DSS+ D+K++++ T+E+ +V
Sbjct: 491 NRWDSSIPDLKQNLKVTREDILYV 514
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 25.4 bits (53), Expect = 7.6
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +1
Query: 238 DTLQGIALKYGVTMEKIRRANRLFATDSLFLREYLLIPVTKDSPFYENGERVTELPPPNH 417
D +QG A V +R R +A+ + + + ++K SP+ + RV+ L NH
Sbjct: 322 DIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGLMLANH 381
Query: 418 RASIAGM 438
SIA +
Sbjct: 382 -TSIASL 387
>SPBC119.09c |||ORMDL family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 186
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = -2
Query: 302 LLALLIFSIVTPYFNAIPCKVSPL-----DITCLMYSSFLFMWLQVLPYFFNGRADSRI 141
++ +++ + + F+AIP L ++T + S +F W+ P+ FNG A R+
Sbjct: 46 VIHIVLIAALRLIFHAIPSVSRELAWTLTNLTYMAGSFIMFHWVTGTPFEFNGGAYDRL 104
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 349 PVTKDSPFYENGERVTELPPPNHRASIAGMPTRNSFSPGSPDEKKSFDEFLNRVDS 516
P+ + +P + + TEL +S + T +S G K S DE+ +VD+
Sbjct: 227 PLRQKTPVSRSSDTTTELSKDLISSSSSIHSTYSSAQTGLTSAKVSSDEYARQVDT 282
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.0 bits (52), Expect = 10.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 108 GGGTSL*RESFYSRVCSTIKKVWKHLQPHEKE 203
GGG ++S++ + +KVWK Q H++E
Sbjct: 2 GGGDLNMKKSWHPLLMRNQEKVWKDEQAHKEE 33
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 25.0 bits (52), Expect = 10.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 170 FFNGRADSRIETLSSKRRSSSIFDVFKYDIHNVDNPLLNQNL 45
FFNG+ S ETLS + D+FK + V+ L + NL
Sbjct: 317 FFNGQDFS--ETLSRAKFEEINMDLFKKTLKPVEQVLKDSNL 356
>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 972
Score = 25.0 bits (52), Expect = 10.0
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = +1
Query: 10 RKLSSLYCVTFTKFW------FSSGLSTLWMSYLKTSNMEEERLFDERVSIRESAR 159
+KL S + +F+KFW FS + W + L + ++ + F + I ++ +
Sbjct: 370 KKLDSTFFESFSKFWNSDTPKFSEENARGWCNVLDDESSQQNQNFSSEIGIFQTVK 425
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 10.0
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -2
Query: 302 LLALLIFSIVTPYFNAIPCKVSPLDITCLMYSSFLFMWLQVLPYFFNGRA 153
LL ++I S+ + + LD TCL+ +F +++ P FN R+
Sbjct: 108 LLNVIIASLSMVFITLGAFVLGTLDTTCLLLLAFKLFFIRNDPTPFNARS 157
>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 241 TLQGIALKYGVTMEKIRRANRLFATDSLFLREYLLIPVTKDSPFYENGERV 393
TL G +KY + +I + L A +S+F +++P + FYE ++V
Sbjct: 2 TLNGNIMKYCLEKGEILISFLLIALESMFRICTVILPSPLRNWFYEQSKKV 52
>SPCC736.11 |ago1|csp9|argonaute|Schizosaccharomyces pombe|chr
3|||Manual
Length = 834
Score = 25.0 bits (52), Expect = 10.0
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +1
Query: 34 VTFTKFWFSSGLSTLWMSYLKTSNMEEERLFDERVSIRESARPLKKYGSTCNH 192
++ + FW + L + M Y SN+ + FD ++ +R + TC H
Sbjct: 200 ISSSAFWRNDSLLQILMEYTDCSNVRDLTRFD----LKRLSRKFRFLKVTCQH 248
>SPAC823.04 |||rRNA processing protein, DUF947|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 189
Score = 25.0 bits (52), Expect = 10.0
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 103 NMEEERLFDERVSIRESARPLKKYGSTCNHMKRNEEYIKHVMSKGDTLQGI-ALKYGVTM 279
++EEER R + K G ++KRNE+ M K +++G AL +
Sbjct: 105 HLEEERAERVMHEFRAQEKERVKEGKKPFYLKRNEQKKLIQMDKYKSMEGTKALDKYIEK 164
Query: 280 EKIRRANR 303
++ RRA +
Sbjct: 165 KRRRRAQK 172
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.132 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,825,799
Number of Sequences: 5004
Number of extensions: 60555
Number of successful extensions: 228
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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